FFCP PHASE1:Hg19::chr14:36989892..36989908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7080 | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11825 | |HGNC=11825 | ||
|TSSclassifier=strong | |||
|UniProt=F8VVG2 | |UniProt=F8VVG2 | ||
|association_with_transcript=245bp_to_ENST00000546983_5end | |association_with_transcript=245bp_to_ENST00000546983_5end | ||
|cluster_id=chr14:36989892..36989908,- | |||
|coexpression_cluster_id=C3426 | |||
|description=CAGE_peak_9_at_NKX2-1_5end | |description=CAGE_peak_9_at_NKX2-1_5end | ||
|id=chr14:36989892..36989908,- | |id=chr14:36989892..36989908,- | ||
|ontology_enrichment_celltype=CL:0000066!9.19e-07!254 | |ontology_enrichment_celltype=CL:0000066!9.19e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.52e-11;1!CL:0000164;1.52e-11;1!CL:0000502;1.52e-11;1!CL:0000172;1.52e-11;1!CL:0000173;1.52e-11;1!CL:0002553;3.63e-11;1!CL:0000082;8.52e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.60e-11,1;CL:0000164,1.60e-11,1;CL:0000502,1.60e-11,1;CL:0000172,1.60e-11,1;CL:0000173,1.60e-11,1;CL:0002351,1.60e-11,1;CL:0002553,2.68e-11,1;CL:0000082,8.44e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.15e-16;29!UBERON:0001041;1.15e-15;30!CL:0002351;1.52e-11;1!UBERON:0007123;8.50e-09;5 | |||
|ontology_enrichment_disease=DOID:305!9.41e-17!106;DOID:1749!6.77e-14!14;DOID:162!8.98e-13!235;DOID:0050687!2.25e-12!143;DOID:14566!2.80e-12!239;DOID:4362!5.04e-09!5 | |ontology_enrichment_disease=DOID:305!9.41e-17!106;DOID:1749!6.77e-14!14;DOID:162!8.98e-13!235;DOID:0050687!2.25e-12!143;DOID:14566!2.80e-12!239;DOID:4362!5.04e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:0050615;8.24e-16;16!DOID:0050619;1.52e-11;1!DOID:1357;1.52e-11;1!DOID:4430;1.52e-11;1!DOID:4960;3.63e-11;1!DOID:3151;3.63e-11;1!DOID:0070004;3.63e-11;1!DOID:3112;3.63e-11;1!DOID:3149;3.63e-11;1!DOID:1324;4.28e-11;15!DOID:3905;6.79e-11;9!DOID:3908;3.46e-09;5!DOID:1325;7.67e-07;7!DOID:3904;7.67e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050615,8.51e-16,16;DOID:4430,1.60e-11,1;DOID:0050619,1.78e-11,1;DOID:1357,1.78e-11,1;DOID:3151,2.42e-11,1;DOID:3149,2.42e-11,1;DOID:3112,2.96e-11,1;DOID:4960,4.01e-11,1;DOID:0070004,4.01e-11,1;DOID:1324,4.22e-11,15;DOID:3905,7.39e-11,9;DOID:3908,3.83e-09,5;DOID:162,2.95e-07,235;DOID:14566,4.69e-07,239;DOID:1325,7.68e-07,7;DOID:3904,7.68e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000065!8.36e-18!53;UBERON:0001737!2.73e-17!9;UBERON:0008947!5.67e-17!38;UBERON:0003258!5.67e-17!38;UBERON:0001004!5.15e-16!72;UBERON:0004119!5.96e-12!169;UBERON:0000925!5.96e-12!169;UBERON:0006595!5.96e-12!169;UBERON:0001007!5.54e-10!155;UBERON:0001555!5.54e-10!155;UBERON:0007026!5.54e-10!155;UBERON:0000072!2.01e-08!46;UBERON:0001041!4.07e-08!98;UBERON:0000077!7.98e-08!130;UBERON:0004921!1.02e-07!129;UBERON:0004185!1.02e-07!129;UBERON:0000002!1.61e-07!6;UBERON:0001560!1.61e-07!6;UBERON:0001557!1.69e-07!19;UBERON:0002048!1.77e-07!22;UBERON:0000117!1.77e-07!22;UBERON:0000171!1.77e-07!22;UBERON:0000170!1.77e-07!22;UBERON:0005597!1.77e-07!22;UBERON:0000118!1.77e-07!22 | |ontology_enrichment_uberon=UBERON:0000065!8.36e-18!53;UBERON:0001737!2.73e-17!9;UBERON:0008947!5.67e-17!38;UBERON:0003258!5.67e-17!38;UBERON:0001004!5.15e-16!72;UBERON:0004119!5.96e-12!169;UBERON:0000925!5.96e-12!169;UBERON:0006595!5.96e-12!169;UBERON:0001007!5.54e-10!155;UBERON:0001555!5.54e-10!155;UBERON:0007026!5.54e-10!155;UBERON:0000072!2.01e-08!46;UBERON:0001041!4.07e-08!98;UBERON:0000077!7.98e-08!130;UBERON:0004921!1.02e-07!129;UBERON:0004185!1.02e-07!129;UBERON:0000002!1.61e-07!6;UBERON:0001560!1.61e-07!6;UBERON:0001557!1.69e-07!19;UBERON:0002048!1.77e-07!22;UBERON:0000117!1.77e-07!22;UBERON:0000171!1.77e-07!22;UBERON:0000170!1.77e-07!22;UBERON:0005597!1.77e-07!22;UBERON:0000118!1.77e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0002048;1.37e-21;22!UBERON:0000117;1.37e-21;22!UBERON:0000171;1.37e-21;22!UBERON:0000170;1.37e-21;22!UBERON:0005178;8.23e-12;34!UBERON:0002224;8.23e-12;34!UBERON:0001764;1.52e-11;1!UBERON:0001825;1.52e-11;1!UBERON:0002171;3.63e-11;1!UBERON:0006518;3.63e-11;1!UBERON:0008949;3.63e-11;1!UBERON:0000101;3.63e-11;1!UBERON:0002167;3.63e-11;1!UBERON:0005181;9.61e-11;35!UBERON:0002046;8.50e-09;5!UBERON:0004802;8.52e-09;19!UBERON:0000115;8.52e-09;19!UBERON:0000065;5.38e-08;44!UBERON:0004807;1.29e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.68e-21,22;UBERON:0000117,1.68e-21,22;UBERON:0000171,1.68e-21,22;UBERON:0000170,1.68e-21,22;UBERON:0005597,1.68e-21,22;UBERON:0000118,1.68e-21,22;UBERON:0005153,2.47e-16,37;UBERON:0005178,1.09e-13,34;UBERON:0002224,1.09e-13,34;UBERON:0005181,2.80e-13,35;UBERON:0005911,4.59e-13,82;UBERON:0005157,1.16e-12,47;UBERON:0008947,3.54e-12,38;UBERON:0003258,3.54e-12,38;UBERON:0001764,1.78e-11,1;UBERON:0001825,1.78e-11,1;UBERON:0002171,3.63e-11,1;UBERON:0006518,3.63e-11,1;UBERON:0008949,3.63e-11,1;UBERON:0000101,3.63e-11,1;UBERON:0002167,3.63e-11,1;UBERON:0002046,7.55e-09,5;UBERON:0004117,7.55e-09,5;UBERON:0007689,7.55e-09,5;UBERON:0007123,7.55e-09,5;UBERON:0003091,7.55e-09,5;UBERON:0004802,8.44e-09,19;UBERON:0000115,8.44e-09,19;UBERON:0000915,1.03e-08,52;UBERON:0000065,2.31e-08,54;UBERON:0001004,1.11e-07,74 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,1.19040304263846,0.742585499285292,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.384380134730212,0.765676274967505,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74463030566391,0,0,0.251932747854276,4.09074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,8.64462410995405,0,0,0,0,0,0.241192877250816,0,0,0,0,0,2.92789862985067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0.311064574191741,0,0.330991955875499,0.313932918407225,0,0,0,1.04135843001079,0.0979923974143777,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,1.95551382734803,0,0,0.799238438328521,0,0.916292769327325,0,0,0,0,0,0,0.713987523454252,0,0,0.410716136675979,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67717343799633,0,0,2.00640639386872,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17466153824464,1.10043013569766,1.24271716604159,0,0,0,0,0,0,0,0,2.04170325125305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.97894681802587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.59996218756479,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0.707818340086442,0,0,0,0.690359926060101,0,0,0,0,0,1.47394725759087,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71845834033127,0,0,0.157115589916002,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,3.01925687133347,0,0,0,0,2.35676547101626,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45771421354797,0.827413057616144,0,0,0,0,0.286888821570705,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@NKX2-1 | |short_description=p9@NKX2-1 | ||
}} | }} |
Latest revision as of 22:37, 19 September 2015
Short description: | p9@NKX2-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NKX2-1_5end |
Coexpression cluster: | C3426_bronchioalveolar_anaplastic_astrocytoma_small_somatostatinoma_large_prostate |
Association with transcript: | 245bp_to_ENST00000546983_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | F8VVG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.60e-11 | 1 |
enteroendocrine cell | 1.60e-11 | 1 |
type D enteroendocrine cell | 1.60e-11 | 1 |
somatostatin secreting cell | 1.60e-11 | 1 |
pancreatic D cell | 1.60e-11 | 1 |
progenitor cell of endocrine pancreas | 1.60e-11 | 1 |
lung fibroblast | 2.68e-11 | 1 |
epithelial cell of lung | 8.44e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lung | 1.68e-21 | 22 |
respiratory tube | 1.68e-21 | 22 |
respiration organ | 1.68e-21 | 22 |
pair of lungs | 1.68e-21 | 22 |
lung primordium | 1.68e-21 | 22 |
lung bud | 1.68e-21 | 22 |
epithelial bud | 2.47e-16 | 37 |
thoracic cavity element | 1.09e-13 | 34 |
thoracic cavity | 1.09e-13 | 34 |
thoracic segment organ | 2.80e-13 | 35 |
endo-epithelium | 4.59e-13 | 82 |
epithelial fold | 1.16e-12 | 47 |
respiratory primordium | 3.54e-12 | 38 |
endoderm of foregut | 3.54e-12 | 38 |
maxillary sinus | 1.78e-11 | 1 |
paranasal sinus | 1.78e-11 | 1 |
lower lobe of right lung | 3.63e-11 | 1 |
right lung lobe | 3.63e-11 | 1 |
lower lobe of lung | 3.63e-11 | 1 |
lobe of lung | 3.63e-11 | 1 |
right lung | 3.63e-11 | 1 |
thyroid gland | 7.55e-09 | 5 |
pharyngeal pouch | 7.55e-09 | 5 |
thyroid diverticulum | 7.55e-09 | 5 |
pharyngeal pouch 2 | 7.55e-09 | 5 |
thyroid primordium | 7.55e-09 | 5 |
respiratory tract epithelium | 8.44e-09 | 19 |
lung epithelium | 8.44e-09 | 19 |
thoracic segment of trunk | 1.03e-08 | 52 |
respiratory tract | 2.31e-08 | 54 |
respiratory system | 1.11e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
respiratory system cancer | 8.51e-16 | 16 |
somatostatinoma | 1.60e-11 | 1 |
paranasal sinus cancer | 1.78e-11 | 1 |
maxillary sinus cancer | 1.78e-11 | 1 |
skin squamous cell carcinoma | 2.42e-11 | 1 |
keratoacanthoma | 2.42e-11 | 1 |
papillary adenocarcinoma | 2.96e-11 | 1 |
bone marrow cancer | 4.01e-11 | 1 |
myeloma | 4.01e-11 | 1 |
lung cancer | 4.22e-11 | 15 |
lung carcinoma | 7.39e-11 | 9 |
non-small cell lung carcinoma | 3.83e-09 | 5 |
cancer | 2.95e-07 | 235 |
disease of cellular proliferation | 4.69e-07 | 239 |
bronchus cancer | 7.68e-07 | 7 |
bronchogenic carcinoma | 7.68e-07 | 7 |