FFCP PHASE1:Hg19::chr3:121554021..121554043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55840 | |EntrezGene=55840 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23115 | |HGNC=23115 | ||
|TSSclassifier=strong | |||
|UniProt=F8WCI9,Q96CJ1 | |UniProt=F8WCI9,Q96CJ1 | ||
|association_with_transcript=0bp_to_ENST00000490434,NM_018456,uc003eem.2,uc003een.2,uc003eeo.2_5end | |association_with_transcript=0bp_to_ENST00000490434,NM_018456,uc003eem.2,uc003een.2,uc003eeo.2_5end | ||
|cluster_id=chr3:121554021..121554043,+ | |||
|description=CAGE_peak_2_at_EAF2_5end | |description=CAGE_peak_2_at_EAF2_5end | ||
|id=chr3:121554021..121554043,+ | |id=chr3:121554021..121554043,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.48e-21!172;CL:0000566!1.48e-21!172;CL:0000988!6.06e-19!182;CL:0002032!6.56e-19!165;CL:0000837!6.56e-19!165;CL:0000738!4.36e-16!140;CL:0000542!4.60e-15!53;CL:0000051!4.60e-15!53;CL:0000838!1.30e-14!52;CL:0002087!2.37e-14!119;CL:0002031!1.83e-13!124;CL:0000945!5.07e-12!24;CL:0000826!5.07e-12!24;CL:0000236!3.11e-08!14;CL:0000763!8.27e-07!112;CL:0000049!8.27e-07!112 | |ontology_enrichment_celltype=CL:0000037!1.48e-21!172;CL:0000566!1.48e-21!172;CL:0000988!6.06e-19!182;CL:0002032!6.56e-19!165;CL:0000837!6.56e-19!165;CL:0000738!4.36e-16!140;CL:0000542!4.60e-15!53;CL:0000051!4.60e-15!53;CL:0000838!1.30e-14!52;CL:0002087!2.37e-14!119;CL:0002031!1.83e-13!124;CL:0000945!5.07e-12!24;CL:0000826!5.07e-12!24;CL:0000236!3.11e-08!14;CL:0000763!8.27e-07!112;CL:0000049!8.27e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.30e-14;24!CL:0000542;1.04e-10;53!CL:0000236;1.03e-09;13 | |ontology_enrichment_celltype_v019=CL:0000945;1.30e-14;24!CL:0000542;1.04e-10;53!CL:0000236;1.03e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.74e-24,168;CL:0000988,6.42e-22,177;CL:0002032,1.60e-20,161;CL:0000837,1.60e-20,161;CL:0000738,4.43e-18,136;CL:0000542,1.85e-17,53;CL:0000051,1.85e-17,53;CL:0000838,6.96e-17,52;CL:0002087,3.65e-16,115;CL:0000945,1.57e-14,24;CL:0000826,1.57e-14,24;CL:0002031,1.88e-14,120;CL:0000236,2.55e-10,14;CL:0000763,9.59e-07,108;CL:0000049,9.59e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000051;1.04e-10;53 | |ontology_enrichment_development_v019=CL:0000051;1.04e-10;53 | ||
|ontology_enrichment_disease=DOID:2531!1.77e-09!51;DOID:0060083!1.77e-09!51;DOID:1240!7.32e-08!39 | |ontology_enrichment_disease=DOID:2531!1.77e-09!51;DOID:0060083!1.77e-09!51;DOID:1240!7.32e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.50e-07;39 | |ontology_enrichment_disease_v019=DOID:1240;7.50e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,4.71e-10,51;DOID:0060083,4.71e-10,51;DOID:1240,1.27e-08,39;DOID:8692,9.38e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.23e-20!115;UBERON:0001049!1.28e-16!57;UBERON:0005068!1.28e-16!57;UBERON:0006241!1.28e-16!57;UBERON:0007135!1.28e-16!57;UBERON:0002616!3.29e-14!59;UBERON:0003080!9.30e-14!42;UBERON:0001017!1.05e-13!82;UBERON:0002780!1.44e-13!41;UBERON:0001890!1.44e-13!41;UBERON:0006240!1.44e-13!41;UBERON:0005743!1.13e-12!86;UBERON:0000955!1.14e-12!69;UBERON:0006238!1.14e-12!69;UBERON:0000073!1.50e-11!94;UBERON:0001016!1.50e-11!94;UBERON:0002020!9.35e-11!34;UBERON:0003528!9.35e-11!34;UBERON:0003075!1.10e-10!86;UBERON:0007284!1.10e-10!86;UBERON:0002346!1.50e-10!90;UBERON:0001893!1.61e-10!34;UBERON:0001869!2.56e-10!32;UBERON:0002791!5.00e-10!33;UBERON:0003056!1.99e-08!61;UBERON:0002619!3.82e-08!22;UBERON:0000956!4.05e-08!25;UBERON:0000203!4.05e-08!25;UBERON:0001950!4.39e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!2.23e-20!115;UBERON:0001049!1.28e-16!57;UBERON:0005068!1.28e-16!57;UBERON:0006241!1.28e-16!57;UBERON:0007135!1.28e-16!57;UBERON:0002616!3.29e-14!59;UBERON:0003080!9.30e-14!42;UBERON:0001017!1.05e-13!82;UBERON:0002780!1.44e-13!41;UBERON:0001890!1.44e-13!41;UBERON:0006240!1.44e-13!41;UBERON:0005743!1.13e-12!86;UBERON:0000955!1.14e-12!69;UBERON:0006238!1.14e-12!69;UBERON:0000073!1.50e-11!94;UBERON:0001016!1.50e-11!94;UBERON:0002020!9.35e-11!34;UBERON:0003528!9.35e-11!34;UBERON:0003075!1.10e-10!86;UBERON:0007284!1.10e-10!86;UBERON:0002346!1.50e-10!90;UBERON:0001893!1.61e-10!34;UBERON:0001869!2.56e-10!32;UBERON:0002791!5.00e-10!33;UBERON:0003056!1.99e-08!61;UBERON:0002619!3.82e-08!22;UBERON:0000956!4.05e-08!25;UBERON:0000203!4.05e-08!25;UBERON:0001950!4.39e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.33e-12;41!UBERON:0001890;5.33e-12;41!UBERON:0000073;1.69e-11;53!UBERON:0002616;1.69e-11;53!UBERON:0001893;1.88e-11;34!UBERON:0001869;4.42e-11;32!UBERON:0003528;5.39e-11;34!UBERON:0002020;5.39e-11;34!UBERON:0002791;1.13e-10;32!UBERON:0002619;2.00e-10;22!UBERON:0000956;5.07e-10;25!UBERON:0000203;5.07e-10;25!UBERON:0001950;5.05e-09;20!UBERON:0000955;4.51e-07;68 | |ontology_enrichment_uberon_v019=UBERON:0002780;5.33e-12;41!UBERON:0001890;5.33e-12;41!UBERON:0000073;1.69e-11;53!UBERON:0002616;1.69e-11;53!UBERON:0001893;1.88e-11;34!UBERON:0001869;4.42e-11;32!UBERON:0003528;5.39e-11;34!UBERON:0002020;5.39e-11;34!UBERON:0002791;1.13e-10;32!UBERON:0002619;2.00e-10;22!UBERON:0000956;5.07e-10;25!UBERON:0000203;5.07e-10;25!UBERON:0001950;5.05e-09;20!UBERON:0000955;4.51e-07;68 | ||
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| ||
|short_description=p2@EAF2 | |short_description=p2@EAF2 | ||
}} | }} |
Latest revision as of 23:01, 19 September 2015
Short description: | p2@EAF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EAF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490434, NM_018456, uc003eem.2, uc003een.2, uc003eeo.2_5end |
EntrezGene: | EAF2 |
HGNC: | 23115 |
UniProt: | F8WCI9Q96CJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.74e-24 | 168 |
hematopoietic cell | 6.42e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.60e-20 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-20 | 161 |
leukocyte | 4.43e-18 | 136 |
lymphocyte | 1.85e-17 | 53 |
common lymphoid progenitor | 1.85e-17 | 53 |
lymphoid lineage restricted progenitor cell | 6.96e-17 | 52 |
nongranular leukocyte | 3.65e-16 | 115 |
lymphocyte of B lineage | 1.57e-14 | 24 |
pro-B cell | 1.57e-14 | 24 |
hematopoietic lineage restricted progenitor cell | 1.88e-14 | 120 |
B cell | 2.55e-10 | 14 |
myeloid cell | 9.59e-07 | 108 |
common myeloid progenitor | 9.59e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.69e-21 | 114 |
neural tube | 1.18e-20 | 56 |
neural rod | 1.18e-20 | 56 |
future spinal cord | 1.18e-20 | 56 |
neural keel | 1.18e-20 | 56 |
regional part of nervous system | 3.85e-19 | 53 |
regional part of brain | 3.85e-19 | 53 |
regional part of forebrain | 7.72e-17 | 41 |
forebrain | 7.72e-17 | 41 |
anterior neural tube | 7.72e-17 | 41 |
future forebrain | 7.72e-17 | 41 |
central nervous system | 2.16e-15 | 81 |
brain | 1.51e-14 | 68 |
future brain | 1.51e-14 | 68 |
neural plate | 4.92e-14 | 82 |
presumptive neural plate | 4.92e-14 | 82 |
nervous system | 1.26e-13 | 89 |
neurectoderm | 3.11e-13 | 86 |
brain grey matter | 3.62e-13 | 34 |
gray matter | 3.62e-13 | 34 |
telencephalon | 7.28e-13 | 34 |
cerebral hemisphere | 1.36e-12 | 32 |
regional part of telencephalon | 3.90e-12 | 32 |
pre-chordal neural plate | 3.56e-11 | 61 |
regional part of cerebral cortex | 1.90e-10 | 22 |
cerebral cortex | 4.37e-10 | 25 |
pallium | 4.37e-10 | 25 |
neocortex | 4.74e-09 | 20 |
ecto-epithelium | 1.65e-08 | 104 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.71e-10 | 51 |
immune system cancer | 4.71e-10 | 51 |
leukemia | 1.27e-08 | 39 |
myeloid leukemia | 9.38e-07 | 31 |