FFCP PHASE1:Hg19::chr19:55385682..55385717,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2204 | |EntrezGene=2204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3608 | |HGNC=3608 | ||
|TSSclassifier=strong | |||
|UniProt=Q92587 | |UniProt=Q92587 | ||
|association_with_transcript=0bp_to_ENST00000391726_5end | |association_with_transcript=0bp_to_ENST00000391726_5end | ||
|cluster_id=chr19:55385682..55385717,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_FCAR_5end | |description=CAGE_peak_1_at_FCAR_5end | ||
|id=chr19:55385682..55385717,+ | |id=chr19:55385682..55385717,+ | ||
|ontology_enrichment_celltype=CL:0000766!8.37e-44!76;CL:0002057!5.80e-42!42;CL:0002194!3.37e-39!63;CL:0000576!3.37e-39!63;CL:0000040!3.37e-39!63;CL:0000559!3.37e-39!63;CL:0002009!1.84e-38!65;CL:0000860!7.92e-38!45;CL:0000738!4.67e-35!140;CL:0000557!1.92e-34!71;CL:0000839!3.56e-34!70;CL:0002087!6.64e-31!119;CL:0000037!3.67e-29!172;CL:0000566!3.67e-29!172;CL:0000763!4.60e-29!112;CL:0000049!4.60e-29!112;CL:0002031!1.44e-26!124;CL:0002032!8.07e-26!165;CL:0000837!8.07e-26!165;CL:0000988!1.21e-25!182;CL:0000094!1.56e-09!8;CL:0002393!3.43e-09!9;CL:0002397!3.43e-09!9 | |ontology_enrichment_celltype=CL:0000766!8.37e-44!76;CL:0002057!5.80e-42!42;CL:0002194!3.37e-39!63;CL:0000576!3.37e-39!63;CL:0000040!3.37e-39!63;CL:0000559!3.37e-39!63;CL:0002009!1.84e-38!65;CL:0000860!7.92e-38!45;CL:0000738!4.67e-35!140;CL:0000557!1.92e-34!71;CL:0000839!3.56e-34!70;CL:0002087!6.64e-31!119;CL:0000037!3.67e-29!172;CL:0000566!3.67e-29!172;CL:0000763!4.60e-29!112;CL:0000049!4.60e-29!112;CL:0002031!1.44e-26!124;CL:0002032!8.07e-26!165;CL:0000837!8.07e-26!165;CL:0000988!1.21e-25!182;CL:0000094!1.56e-09!8;CL:0002393!3.43e-09!9;CL:0002397!3.43e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.90e-41;33!CL:0002057;4.90e-41;33!CL:0000473;1.07e-39;39!CL:0000234;1.07e-39;39!CL:0000576;9.63e-34;48!CL:0000766;5.62e-27;69!CL:0002087;3.48e-13;104!CL:0000763;4.29e-13;100!CL:0000094;3.11e-12;8!CL:0000738;1.17e-09;136!CL:0002393;9.34e-09;6!CL:0002397;9.34e-09;6!CL:0000081;2.76e-08;11!CL:0000235;7.02e-08;6!CL:0000988;5.72e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.00e-62,48;CL:0000234,2.00e-62,48;CL:0000766,3.14e-59,72;CL:0000860,9.30e-56,42;CL:0002057,9.30e-56,42;CL:0002194,3.88e-54,59;CL:0000576,3.88e-54,59;CL:0000040,3.88e-54,59;CL:0000559,3.88e-54,59;CL:0002009,9.66e-52,61;CL:0000839,2.18e-46,66;CL:0000557,2.05e-45,67;CL:0000738,3.52e-43,136;CL:0002087,1.69e-38,115;CL:0000763,5.30e-38,108;CL:0000049,5.30e-38,108;CL:0000037,1.23e-35,168;CL:0000988,1.96e-32,177;CL:0002031,1.08e-31,120;CL:0002032,3.57e-31,161;CL:0000837,3.57e-31,161;CL:0000094,3.13e-12,8;CL:0002393,8.97e-12,9;CL:0002397,8.97e-12,9;CL:0000081,2.77e-08,11;CL:0000235,7.05e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.39e-40;42!CL:0000049;6.15e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-38!115;UBERON:0002390!1.34e-37!102;UBERON:0003061!1.34e-37!102;UBERON:0002193!7.84e-34!112;UBERON:0002371!2.93e-29!80;UBERON:0001474!1.28e-25!86;UBERON:0002405!8.30e-23!115;UBERON:0004765!1.25e-20!101;UBERON:0001434!1.25e-20!101;UBERON:0001049!1.83e-13!57;UBERON:0005068!1.83e-13!57;UBERON:0006241!1.83e-13!57;UBERON:0007135!1.83e-13!57;UBERON:0003081!6.03e-11!216;UBERON:0003080!1.27e-10!42;UBERON:0002780!3.44e-10!41;UBERON:0001890!3.44e-10!41;UBERON:0006240!3.44e-10!41;UBERON:0002616!4.21e-10!59;UBERON:0003075!1.61e-08!86;UBERON:0007284!1.61e-08!86;UBERON:0002020!1.82e-08!34;UBERON:0003528!1.82e-08!34;UBERON:0000178!2.05e-08!15;UBERON:0000179!2.05e-08!15;UBERON:0000463!2.05e-08!15;UBERON:0001893!2.51e-08!34;UBERON:0002791!4.81e-08!33;UBERON:0001017!8.40e-08!82;UBERON:0002346!1.33e-07!90;UBERON:0000955!1.73e-07!69;UBERON:0006238!1.73e-07!69;UBERON:0001869!1.75e-07!32;UBERON:0005743!1.90e-07!86;UBERON:0002204!3.62e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-11;15!UBERON:0000179;2.85e-11;15!UBERON:0000463;2.85e-11;15!UBERON:0002390;2.73e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.37e-51,98;UBERON:0003061,1.37e-51,98;UBERON:0002193,3.35e-46,108;UBERON:0002371,1.88e-39,76;UBERON:0002405,9.41e-36,93;UBERON:0001474,3.49e-35,82;UBERON:0004765,2.12e-30,90;UBERON:0001434,1.55e-25,100;UBERON:0003081,6.03e-20,203;UBERON:0007023,7.96e-16,114;UBERON:0000178,2.90e-11,15;UBERON:0000179,2.90e-11,15;UBERON:0000463,2.90e-11,15;UBERON:0002204,2.86e-09,167;UBERON:0000926,2.46e-07,315;UBERON:0004120,2.46e-07,315;UBERON:0006603,2.46e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,392.577548295206,318.962229818784,461.352047481906,0,0,0,0,0,4.69760702935756,352.341079826274,281.163315353139,358.935980164019,1.79132379391939,1.29557466407592,2.57575567634187,433.141353324323,238.817596411328,206.924204193207,803.04232250914,451.462341047965,579.150913573844,1075.10647010788,599.672213984625,600.191899457229,1451.03457022043,731.334146500475,686.612287033313,818.665934670788,460.665581297644,561.808711112712,1576.02596181778,886.085043757094,888.678604860667,367.784199708188,347.864618892126,234.849837543514,1466.13707355161,743.842029570084,832.713346907084,703.245014053624,553.814859362254,583.586425722648,983.774191779224,871.344886746578,869.955103074991,73.0943290639319,113.318091881368,74.6384778009818,199.158663022736,234.726483511274,201.549885718138,50.447255642201,26.0580847130808,5.47992461293902,0,1.09227722252426,0,6.82768356106412,0.800791974072025,2.29900975981793,0.661044872784862,0,0,11.7447437874188,3.44045905312706,2.64342657158052,62.2164504909505,1.84368859342554,1.180258620683,0,1.85041349099558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.535081656179426,0,0,0,0.34362744548263,0,1.59282707162048,0,0,5.57127940587759,1.79181255616186,4.99722906209383,6.15620855314444,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.76821751921912,0,0,0.324547393654683,0.174129737299267,0,15.2633999555419,12.5838880371628,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,933.005355447328,2121.15804489134,0,0,0,0,0,2.4826786753885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.808987848960987,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,11.3259822800203,29.484537407544,20.213838071267,0,0,0,0,0,0,0,0,0.621984346622316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.8384207731214,39.678310223138,23.1917333431335,0,0,0,0,0,0,0,10.836691811106,0.431255149719035,10.5241289749394,0,0,0,0.335032530668698,0,878.585239090045,475.6667201344,1215.48070090789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,95.526828068774,106.347101003578,65.4239929335114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46117361732928,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.422215270595328,0,0,0,0,1.34060455107157,0,5.46034044505319,0,0,0,0,57.3415798432351,34.4086743214069,58.1040130917646,32.1612896868015,39.4907782162746,74.5744307871625,58.3233952217164,54.7256371643047,0,0,0,0,0,0,0,0,0.957526850661834,0,0.649243880549111,0,0,12.6910715576149,0,0,0,0,28.9575441629422,22.6713527538805,0,0,0,10.7463452471122,0,0,0,0,0,0,3.95572084034114,0,0,0,0.47748896947538,12.4725165949708,0,1.9882952955326,0.562677665642051,0,0,0,1.79323189425963,1.10513566212459,0,0,0,0,0,0,0,5.03081368748361,43.1069566224492,0,0,1.76259386507517,0,0,0,1.44999915086959,0,0,0,0,0,0,1.77148277162768,0.60298219312704,1.52581736317083,0.221158519862449,0,1.31631238292384,0,0,0.461701551022782,0.569710279235006,0,0,0,2.87101043758728,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.83309043480088,0,0,0,1.07841812769083,0,0,0,0,0,0,0,0,9.41480036464471,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.06687918137261,0,1.12990370390266,0,0.397429223405979,0.126621591911757,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,7.80546375322726,0.410716136675979,0,0,0,0.558564802544508,0,0.717873024576814,3.39454300848285,3.004582336956,6.69514372325618,5.1059439089912,0,0,0,0,0,0,0.0846733320657845,3.97614844904652,0.408610218334727,0,0,0,0.2249738915515,0,0.425246896606173,0,0.630445658393585,1.62609223218494,0,0,0,1.42939065274673,13.2418394073086,0,0,0,0,0,0.082092520749339,0,0,1.90517903781507,5.30027555648885,1.55139547633861,0.92562821219883,0,0,24.9882545408406,4.55892484789031,2.89967338743037,15.3811466761705,0,0,0,0,0.5013797880454,0,0,0,0,1.46431517882356,1.1267183763585,7.45431954397093,0.443716206147409,1.98708489412427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,3.20075189082423,0,0,0,0,10.5753134205605,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,1.41696576325585,0.478901577171454,0.41023272848151,0.252071696221718,0.622415272177961,0.161475645631851,0,0,0,0,0,0,0,0,2.632361492224,0,0,0,0,0,0.405225507710368,2.34323429584154,1.03343398250592,0.697573912132975,0,0.548257766857182,0,0,0,1.60710550763486,0.672567444437648,1.21393120847326,0.455324382702595,1.77404740325278,0,0,0.815636795721981,0.263091094251396,0,0,0.627944742804112,1.09980912941201,0,0.913158720509496,0.215927591218621,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.821302454849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| ||
|short_description=p1@FCAR | |short_description=p1@FCAR | ||
}} | }} |
Latest revision as of 23:12, 19 September 2015
Short description: | p1@FCAR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCAR_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000391726_5end |
EntrezGene: | FCAR |
HGNC: | 3608 |
UniProt: | Q92587 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.00e-62 | 48 |
phagocyte | 2.00e-62 | 48 |
myeloid leukocyte | 3.14e-59 | 72 |
classical monocyte | 9.30e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.30e-56 | 42 |
monopoietic cell | 3.88e-54 | 59 |
monocyte | 3.88e-54 | 59 |
monoblast | 3.88e-54 | 59 |
promonocyte | 3.88e-54 | 59 |
macrophage dendritic cell progenitor | 9.66e-52 | 61 |
myeloid lineage restricted progenitor cell | 2.18e-46 | 66 |
granulocyte monocyte progenitor cell | 2.05e-45 | 67 |
leukocyte | 3.52e-43 | 136 |
nongranular leukocyte | 1.69e-38 | 115 |
myeloid cell | 5.30e-38 | 108 |
common myeloid progenitor | 5.30e-38 | 108 |
hematopoietic stem cell | 1.23e-35 | 168 |
hematopoietic cell | 1.96e-32 | 177 |
hematopoietic lineage restricted progenitor cell | 1.08e-31 | 120 |
hematopoietic oligopotent progenitor cell | 3.57e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.57e-31 | 161 |
granulocyte | 3.13e-12 | 8 |
intermediate monocyte | 8.97e-12 | 9 |
CD14-positive, CD16-positive monocyte | 8.97e-12 | 9 |
blood cell | 2.77e-08 | 11 |
macrophage | 7.05e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.37e-51 | 98 |
blood island | 1.37e-51 | 98 |
hemolymphoid system | 3.35e-46 | 108 |
bone marrow | 1.88e-39 | 76 |
immune system | 9.41e-36 | 93 |
bone element | 3.49e-35 | 82 |
skeletal element | 2.12e-30 | 90 |
skeletal system | 1.55e-25 | 100 |
lateral plate mesoderm | 6.03e-20 | 203 |
adult organism | 7.96e-16 | 114 |
blood | 2.90e-11 | 15 |
haemolymphatic fluid | 2.90e-11 | 15 |
organism substance | 2.90e-11 | 15 |
musculoskeletal system | 2.86e-09 | 167 |
mesoderm | 2.46e-07 | 315 |
mesoderm-derived structure | 2.46e-07 | 315 |
presumptive mesoderm | 2.46e-07 | 315 |