FFCP PHASE1:Hg19::chr10:94000428..94000487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22849 | |EntrezGene=22849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=21746 | |HGNC=21746 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NE35 | |UniProt=Q8NE35 | ||
|association_with_transcript=-310bp_to_uc001khu.1_5end | |association_with_transcript=-310bp_to_uc001khu.1_5end | ||
|cluster_id=chr10:94000428..94000487,- | |||
|coexpression_cluster_id=C1316 | |coexpression_cluster_id=C1316 | ||
|description=CAGE_peak_4_at_CPEB3_5end | |description=CAGE_peak_4_at_CPEB3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.66e-12;82!UBERON:0002532;3.92e-08;206!UBERON:0010316;3.92e-08;206 | |ontology_enrichment_development_v019=UBERON:0006601;1.66e-12;82!UBERON:0002532;3.92e-08;206!UBERON:0010316;3.92e-08;206 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-46!115;UBERON:0001049!1.56e-25!57;UBERON:0005068!1.56e-25!57;UBERON:0006241!1.56e-25!57;UBERON:0007135!1.56e-25!57;UBERON:0002780!1.54e-21!41;UBERON:0001890!1.54e-21!41;UBERON:0006240!1.54e-21!41;UBERON:0003080!1.97e-21!42;UBERON:0002616!5.87e-20!59;UBERON:0000955!7.32e-18!69;UBERON:0006238!7.32e-18!69;UBERON:0001017!1.07e-17!82;UBERON:0002020!1.90e-17!34;UBERON:0003528!1.90e-17!34;UBERON:0001893!2.27e-17!34;UBERON:0002791!9.06e-17!33;UBERON:0005743!2.85e-16!86;UBERON:0001869!3.60e-16!32;UBERON:0000073!3.88e-16!94;UBERON:0001016!3.88e-16!94;UBERON:0002619!2.22e-15!22;UBERON:0001950!5.03e-14!20;UBERON:0003075!6.76e-14!86;UBERON:0007284!6.76e-14!86;UBERON:0002346!5.73e-13!90;UBERON:0000956!5.36e-12!25;UBERON:0000203!5.36e-12!25;UBERON:0003056!5.74e-10!61;UBERON:0000153!2.55e-08!129;UBERON:0007811!2.55e-08!129;UBERON:0000033!4.91e-08!123;UBERON:0002308!4.46e-07!9;UBERON:0000125!4.46e-07!9;UBERON:0002420!6.15e-07!9;UBERON:0007245!6.15e-07!9;UBERON:0010009!6.15e-07!9;UBERON:0010011!6.15e-07!9;UBERON:0000454!6.15e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.00e-46!115;UBERON:0001049!1.56e-25!57;UBERON:0005068!1.56e-25!57;UBERON:0006241!1.56e-25!57;UBERON:0007135!1.56e-25!57;UBERON:0002780!1.54e-21!41;UBERON:0001890!1.54e-21!41;UBERON:0006240!1.54e-21!41;UBERON:0003080!1.97e-21!42;UBERON:0002616!5.87e-20!59;UBERON:0000955!7.32e-18!69;UBERON:0006238!7.32e-18!69;UBERON:0001017!1.07e-17!82;UBERON:0002020!1.90e-17!34;UBERON:0003528!1.90e-17!34;UBERON:0001893!2.27e-17!34;UBERON:0002791!9.06e-17!33;UBERON:0005743!2.85e-16!86;UBERON:0001869!3.60e-16!32;UBERON:0000073!3.88e-16!94;UBERON:0001016!3.88e-16!94;UBERON:0002619!2.22e-15!22;UBERON:0001950!5.03e-14!20;UBERON:0003075!6.76e-14!86;UBERON:0007284!6.76e-14!86;UBERON:0002346!5.73e-13!90;UBERON:0000956!5.36e-12!25;UBERON:0000203!5.36e-12!25;UBERON:0003056!5.74e-10!61;UBERON:0000153!2.55e-08!129;UBERON:0007811!2.55e-08!129;UBERON:0000033!4.91e-08!123;UBERON:0002308!4.46e-07!9;UBERON:0000125!4.46e-07!9;UBERON:0002420!6.15e-07!9;UBERON:0007245!6.15e-07!9;UBERON:0010009!6.15e-07!9;UBERON:0010011!6.15e-07!9;UBERON:0000454!6.15e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.37e-24;41!UBERON:0001890;3.37e-24;41!UBERON:0003528;8.83e-23;34!UBERON:0002020;8.83e-23;34!UBERON:0001893;9.42e-23;34!UBERON:0002791;1.32e-22;32!UBERON:0001869;1.62e-22;32!UBERON:0002619;1.77e-22;22!UBERON:0000073;5.59e-22;53!UBERON:0002616;5.59e-22;53!UBERON:0001950;2.04e-20;20!UBERON:0000956;1.03e-18;25!UBERON:0000203;1.03e-18;25!UBERON:0007023;7.28e-17;114!UBERON:0000955;9.72e-14;68!UBERON:0001017;3.22e-13;75!UBERON:0001016;5.54e-12;83!UBERON:0000125;6.38e-10;9!UBERON:0002308;6.38e-10;9!UBERON:0002420;1.23e-09;9!UBERON:0007245;1.23e-09;9!UBERON:0010009;1.23e-09;9!UBERON:0010011;1.23e-09;9!UBERON:0000454;1.23e-09;9!UBERON:0009663;4.28e-08;7!UBERON:0001894;8.29e-08;7!UBERON:0000200;1.56e-07;6!UBERON:0001871;1.89e-07;6!UBERON:0011216;1.94e-07;132!UBERON:0004732;6.29e-07;13!UBERON:0002298;8.87e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0002780;3.37e-24;41!UBERON:0001890;3.37e-24;41!UBERON:0003528;8.83e-23;34!UBERON:0002020;8.83e-23;34!UBERON:0001893;9.42e-23;34!UBERON:0002791;1.32e-22;32!UBERON:0001869;1.62e-22;32!UBERON:0002619;1.77e-22;22!UBERON:0000073;5.59e-22;53!UBERON:0002616;5.59e-22;53!UBERON:0001950;2.04e-20;20!UBERON:0000956;1.03e-18;25!UBERON:0000203;1.03e-18;25!UBERON:0007023;7.28e-17;114!UBERON:0000955;9.72e-14;68!UBERON:0001017;3.22e-13;75!UBERON:0001016;5.54e-12;83!UBERON:0000125;6.38e-10;9!UBERON:0002308;6.38e-10;9!UBERON:0002420;1.23e-09;9!UBERON:0007245;1.23e-09;9!UBERON:0010009;1.23e-09;9!UBERON:0010011;1.23e-09;9!UBERON:0000454;1.23e-09;9!UBERON:0009663;4.28e-08;7!UBERON:0001894;8.29e-08;7!UBERON:0000200;1.56e-07;6!UBERON:0001871;1.89e-07;6!UBERON:0011216;1.94e-07;132!UBERON:0004732;6.29e-07;13!UBERON:0002298;8.87e-07;6 | ||
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| ||
|short_description=p4@CPEB3 | |short_description=p4@CPEB3 | ||
}} | }} |
Latest revision as of 00:26, 20 September 2015
Short description: | p4@CPEB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CPEB3_5end |
Coexpression cluster: | C1316_cerebellum_thalamus_globus_substantia_occipital_hippocampus_middle |
Association with transcript: | -310bp_to_uc001khu.1_5end |
EntrezGene: | CPEB3 |
HGNC: | 21746 |
UniProt: | Q8NE35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data