FFCP PHASE1:Hg19::chr19:55767076..55767090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22870 | |EntrezGene=22870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29195 | |HGNC=29195 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLT9 | |UniProt=B4DLT9 | ||
|association_with_transcript=46bp_to_AK297152_5end | |association_with_transcript=46bp_to_AK297152_5end | ||
|cluster_id=chr19:55767076..55767090,- | |||
|coexpression_cluster_id=C3641 | |||
|description=CAGE_peak_5_at_PPP6R1_5end | |description=CAGE_peak_5_at_PPP6R1_5end | ||
|id=chr19:55767076..55767090,- | |id=chr19:55767076..55767090,- | ||
|ontology_enrichment_celltype=CL:0000037!5.43e-49!172;CL:0000566!5.43e-49!172;CL:0000988!1.47e-44!182;CL:0002032!2.31e-42!165;CL:0000837!2.31e-42!165;CL:0000542!6.54e-38!53;CL:0000051!6.54e-38!53;CL:0000838!3.19e-37!52;CL:0000738!1.75e-28!140;CL:0000084!4.18e-27!25;CL:0000827!4.18e-27!25;CL:0002087!1.97e-26!119;CL:0002031!1.70e-24!124;CL:0000791!3.23e-19!18;CL:0000789!3.23e-19!18;CL:0002420!3.23e-19!18;CL:0002419!3.23e-19!18;CL:0000790!3.23e-19!18;CL:0000625!1.45e-14!11;CL:0000763!5.72e-12!112;CL:0000049!5.72e-12!112;CL:0000945!2.34e-10!24;CL:0000826!2.34e-10!24;CL:0000134!3.53e-09!358;CL:0002320!1.51e-08!365 | |ontology_enrichment_celltype=CL:0000037!5.43e-49!172;CL:0000566!5.43e-49!172;CL:0000988!1.47e-44!182;CL:0002032!2.31e-42!165;CL:0000837!2.31e-42!165;CL:0000542!6.54e-38!53;CL:0000051!6.54e-38!53;CL:0000838!3.19e-37!52;CL:0000738!1.75e-28!140;CL:0000084!4.18e-27!25;CL:0000827!4.18e-27!25;CL:0002087!1.97e-26!119;CL:0002031!1.70e-24!124;CL:0000791!3.23e-19!18;CL:0000789!3.23e-19!18;CL:0002420!3.23e-19!18;CL:0002419!3.23e-19!18;CL:0000790!3.23e-19!18;CL:0000625!1.45e-14!11;CL:0000763!5.72e-12!112;CL:0000049!5.72e-12!112;CL:0000945!2.34e-10!24;CL:0000826!2.34e-10!24;CL:0000134!3.53e-09!358;CL:0002320!1.51e-08!365 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.37e-31;25!CL:0000791;2.23e-23;18!CL:0000789;2.23e-23;18!CL:0002419;2.23e-23;18!CL:0000625;1.03e-20;11!CL:0000542;3.44e-19;53!CL:0000945;8.73e-10;24!CL:0000784;6.28e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.54e-37,168;CL:0000988,7.77e-35,177;CL:0000838,2.88e-34,52;CL:0000542,1.88e-33,53;CL:0000051,1.88e-33,53;CL:0002032,9.00e-32,161;CL:0000837,9.00e-32,161;CL:0000084,4.68e-31,25;CL:0000827,4.68e-31,25;CL:0000791,1.41e-23,18;CL:0000789,1.41e-23,18;CL:0002420,1.41e-23,18;CL:0002419,1.41e-23,18;CL:0000790,1.41e-23,18;CL:0000625,5.34e-21,11;CL:0002087,6.09e-16,115;CL:0000738,2.97e-15,136;CL:0002031,6.94e-14,120;CL:0000134,6.95e-10,354;CL:0000945,8.04e-10,24;CL:0000826,8.04e-10,24;CL:0002320,2.03e-09,361;CL:0000784,6.55e-09,3;CL:0000219,8.53e-08,386;CL:0000763,1.93e-07,108;CL:0000049,1.93e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-23;18!CL:0000051;3.44e-19;53 | |||
|ontology_enrichment_disease=DOID:2531!3.32e-40!51;DOID:0060083!3.32e-40!51;DOID:1240!3.53e-31!39;DOID:8692!1.22e-24!31;DOID:0060058!1.03e-12!10;DOID:0050686!7.87e-08!137 | |ontology_enrichment_disease=DOID:2531!3.32e-40!51;DOID:0060083!3.32e-40!51;DOID:1240!3.53e-31!39;DOID:8692!1.22e-24!31;DOID:0060058!1.03e-12!10;DOID:0050686!7.87e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.30e-34;31!DOID:1240;6.13e-31;39!DOID:2531;1.25e-30;51!DOID:0060083;1.25e-30;51!DOID:0060058;9.67e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.08e-53,51;DOID:0060083,3.08e-53,51;DOID:1240,3.60e-42,39;DOID:8692,1.28e-35,31;DOID:0060058,9.76e-15,10;DOID:0050686,2.52e-14,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.26e-09!7;UBERON:0002384!1.06e-07!375;UBERON:0002390!1.42e-07!102;UBERON:0003061!1.42e-07!102;UBERON:0002193!3.89e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.56e-08;5!UBERON:0005057;9.56e-08;5!UBERON:0002390;2.23e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.19e-12,7;UBERON:0005057,8.19e-12,7;UBERON:0002370,7.31e-10,4;UBERON:0005058,7.31e-10,4;UBERON:0009113,7.31e-10,4;UBERON:0003295,7.31e-10,4;UBERON:0005562,7.31e-10,4;UBERON:0002384,8.72e-09,371 | |||
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|short_description=p5@PPP6R1 | |short_description=p5@PPP6R1 | ||
}} | }} |
Latest revision as of 00:58, 20 September 2015
Short description: | p5@PPP6R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPP6R1_5end |
Coexpression cluster: | C3641_granulocyte_acute_Dendritic_CD133_NK_chronic_biphenotypic |
Association with transcript: | 46bp_to_AK297152_5end |
EntrezGene: | PPP6R1 |
HGNC: | 29195 |
UniProt: | B4DLT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.54e-37 | 168 |
hematopoietic cell | 7.77e-35 | 177 |
lymphoid lineage restricted progenitor cell | 2.88e-34 | 52 |
lymphocyte | 1.88e-33 | 53 |
common lymphoid progenitor | 1.88e-33 | 53 |
hematopoietic oligopotent progenitor cell | 9.00e-32 | 161 |
hematopoietic multipotent progenitor cell | 9.00e-32 | 161 |
T cell | 4.68e-31 | 25 |
pro-T cell | 4.68e-31 | 25 |
mature alpha-beta T cell | 1.41e-23 | 18 |
alpha-beta T cell | 1.41e-23 | 18 |
immature T cell | 1.41e-23 | 18 |
mature T cell | 1.41e-23 | 18 |
immature alpha-beta T cell | 1.41e-23 | 18 |
CD8-positive, alpha-beta T cell | 5.34e-21 | 11 |
nongranular leukocyte | 6.09e-16 | 115 |
leukocyte | 2.97e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 6.94e-14 | 120 |
mesenchymal cell | 6.95e-10 | 354 |
lymphocyte of B lineage | 8.04e-10 | 24 |
pro-B cell | 8.04e-10 | 24 |
connective tissue cell | 2.03e-09 | 361 |
plasmacytoid dendritic cell | 6.55e-09 | 3 |
motile cell | 8.53e-08 | 386 |
myeloid cell | 1.93e-07 | 108 |
common myeloid progenitor | 1.93e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.19e-12 | 7 |
immune organ | 8.19e-12 | 7 |
thymus | 7.31e-10 | 4 |
hemolymphoid system gland | 7.31e-10 | 4 |
thymic region | 7.31e-10 | 4 |
pharyngeal gland | 7.31e-10 | 4 |
thymus primordium | 7.31e-10 | 4 |
connective tissue | 8.72e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.08e-53 | 51 |
immune system cancer | 3.08e-53 | 51 |
leukemia | 3.60e-42 | 39 |
myeloid leukemia | 1.28e-35 | 31 |
lymphoma | 9.76e-15 | 10 |
organ system cancer | 2.52e-14 | 137 |