FFCP PHASE1:Hg19::chr6:86159476..86159492,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:86159476..86159492,+ to FFCP PHASE1:Hg19::chr6:86159476..86159492,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4907 | |EntrezGene=4907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8021 | |HGNC=8021 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGM0,B3KQI8,P21589,Q6NZX3,Q96B60 | |UniProt=E9PGM0,B3KQI8,P21589,Q6NZX3,Q96B60 | ||
|association_with_transcript=174bp_to_ENST00000369647,NM_001204813,NM_002526,uc003pkn.2,uc003pko.3,uc010kbr.2_5end | |||
|cluster_id=chr6:86159476..86159492,+ | |||
|description=CAGE_peak_5_at_NT5E_5end | |||
|id=chr6:86159476..86159492,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.43e-31!180;CL:0000680!1.35e-16!57;CL:0000056!1.35e-16!57;CL:0000355!1.35e-16!57;CL:0000187!4.46e-15!54;CL:0000192!1.46e-14!42;CL:0000514!1.46e-14!42;CL:0000183!1.62e-14!59;CL:0000359!6.99e-14!32;CL:0000057!7.17e-14!75;CL:0000393!6.61e-12!60;CL:0000211!6.61e-12!60;CL:0002371!1.26e-10!591;CL:0000144!1.92e-08!625;CL:0002620!2.28e-08!23;CL:0000048!3.99e-08!430;CL:0000723!5.55e-08!436;CL:0000222!7.94e-07!119;CL:0000034!8.54e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.77e-17;32!CL:0000192;1.49e-12;43!CL:0000134;6.34e-09;55!CL:0002620;1.15e-08;23!CL:0002539;1.62e-08;10!CL:0000187;1.86e-08;55!CL:0000048;1.30e-07;58!CL:0000723;3.20e-07;61!CL:0002320;4.33e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.79e-18,32;CL:0000680,5.91e-17,58;CL:0000056,5.91e-17,58;CL:0000355,5.91e-17,58;CL:0000192,6.37e-17,43;CL:0000514,6.37e-17,43;CL:0000187,5.01e-15,55;CL:0000048,7.72e-14,427;CL:0000723,1.98e-13,433;CL:0000034,2.25e-12,441;CL:0000057,2.65e-12,76;CL:0000393,3.02e-12,61;CL:0000211,3.02e-12,61;CL:0002620,8.16e-09,23;CL:0002539,1.37e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.49e-12;43!CL:0000355;3.10e-09;58 | |||
|ontology_enrichment_disease=DOID:2394!3.20e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.73e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.56e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.60e-22!83;UBERON:0002329!1.60e-22!83;UBERON:0003077!1.60e-22!83;UBERON:0003059!1.60e-22!83;UBERON:0007282!1.60e-22!83;UBERON:0009618!1.60e-22!83;UBERON:0007285!1.60e-22!83;UBERON:0000486!1.71e-19!82;UBERON:0004290!5.75e-18!70;UBERON:0002385!1.58e-14!63;UBERON:0001015!1.58e-14!63;UBERON:0000383!1.58e-14!63;UBERON:0001134!2.47e-14!61;UBERON:0002036!2.47e-14!61;UBERON:0003082!2.47e-14!61;UBERON:0005256!4.62e-14!143;UBERON:0001637!1.17e-08!42;UBERON:0003509!1.17e-08!42;UBERON:0004572!1.17e-08!42;UBERON:0004573!2.85e-08!33;UBERON:0004571!2.85e-08!33;UBERON:0000475!6.43e-08!365;UBERON:0002199!1.61e-07!45;UBERON:0002416!1.61e-07!45;UBERON:0003102!2.12e-07!95;UBERON:0002097!5.56e-07!40;UBERON:0002100!7.24e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.56e-09;33!UBERON:0004571;2.56e-09;33!UBERON:0001434;7.67e-09;36!UBERON:0004237;1.62e-08;10!UBERON:0004695;1.62e-08;10!UBERON:0002111;1.62e-08;10!UBERON:0004178;1.62e-08;10!UBERON:0002097;3.61e-07;41!UBERON:0001637;4.62e-07;42!UBERON:0003509;4.62e-07;42!UBERON:0004572;4.62e-07;42!UBERON:0002204;4.89e-07;70!UBERON:0000075;4.92e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.11e-19,73;UBERON:0002329,4.88e-19,71;UBERON:0003059,4.88e-19,71;UBERON:0007282,4.88e-19,71;UBERON:0004290,4.88e-19,71;UBERON:0009618,4.88e-19,71;UBERON:0000486,6.40e-19,83;UBERON:0003077,1.59e-18,72;UBERON:0007285,1.59e-18,72;UBERON:0007503,1.85e-16,78;UBERON:0001134,6.59e-15,62;UBERON:0002036,6.59e-15,62;UBERON:0003082,6.59e-15,62;UBERON:0002385,9.94e-15,64;UBERON:0001015,9.94e-15,64;UBERON:0000383,9.94e-15,64;UBERON:0005256,7.03e-11,122;UBERON:0001637,1.29e-10,42;UBERON:0003509,1.29e-10,42;UBERON:0004572,1.29e-10,42;UBERON:0004573,2.34e-10,33;UBERON:0004571,2.34e-10,33;UBERON:0002097,2.95e-09,41;UBERON:0002199,3.03e-09,46;UBERON:0002416,3.03e-09,46;UBERON:0004237,1.37e-08,10;UBERON:0004695,1.37e-08,10;UBERON:0002111,1.37e-08,10;UBERON:0004178,1.37e-08,10;UBERON:0003102,1.48e-08,99;UBERON:0003104,2.35e-08,160;UBERON:0009142,2.35e-08,160;UBERON:0000490,3.64e-08,148;UBERON:0002049,4.22e-07,78;UBERON:0007798,4.22e-07,78;UBERON:0002204,4.44e-07,167;UBERON:0000075,5.37e-07,16 | |||
|phase1_expression=1.81678379270557,0.856402095563933,1.12763523276777,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0.655324116390517,2.63766978228454,1.36142988256051,1.98838425436749,2.6893005858071,3.01347264011988,2.92124036154949,5.85519358548608,1.72369481307503,1.02000345622126,2.5076377718247,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,1.32208974556972,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0.889719378972363,0.267540828089713,1.04535523804977,0.453237370790265,0,0,0,4.77848121486145,3.90650072313851,1.90090408889675,1.95747654801105,3.83959833463255,1.24930726552346,2.60454977248419,0.821127996921047,1.20964045934839,0.802320587350522,2.02754165435919,2.43806866313962,0.670700859703636,0,3.61439152384566,1.00267582127178,2.17269778441236,4.7717156823066,7.78615792484217,3.02511414925017,4.21285855178871,1.22968699970376,0.523916301990851,0,1.11235332835329,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,3.17782033951725,1.43418310374407,2.12801029319014,0.560677600142307,1.06748995729705,1.97334038733728,0.311211035399766,0.269421344139376,0.817309515567294,2.57307626996383,0,0.70296429550139,2.49728061464256,0.570471821544449,2.83952493048422,2.58355897016283,2.26622122115384,2.66856532734272,1.02077085627447,2.33385202892359,0.723280468230358,10.6920257155385,13.1051472517635,0.910161361938026,2.15585442544872,1.0100166837244,2.00189631795143,1.93944880838928,7.46261955497424,7.35570709917647,15.3242820084729,0.907457465280168,1.97328599257748,1.2813443329114,2.11931901159562,1.80054657650641,2.26715564324566,1.54584324027377,2.04728541964749,2.02531598689519,2.04617710838517,1.51460264546469,1.84099797284599,2.10139873864455,3.90510551768276,3.72782763442269,1.01736355386293,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,4.69348596989448,4.5026865673502,4.14404764057442,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,0,0,0,0,0.441463099414651,0,4.28919525746314,0.439001141634502,0,1.70899253099772,0.740707561268237,0.977424915930974,0,4.3299402607582,2.66639931442677,5.63561732331944,0.433099343283221,0.462985512576611,0,0,0,0,0,0,2.81201501960331,1.6798212819886,1.27597587518148,1.25381931783988,1.74380363108377,1.91691339582606,0.492663237895943,0.088048434013226,0,0,0,0.317489471460845,0.381988425558278,1.17217447210047,0,0.205654985406647,0.600686115687835,0,2.46688385559794,2.1798003441664,4.9870034358246,5.8172272091,0,3.381211010224,5.05282421511254,4.16029747645464,1.28603687131071,4.25547396069835,3.19706614819319,0.142977993658148,0.542621605391443,0,3.90883421152482,0,0.791951872933429,0.602878754119172,2.61460037580088,0.299918973546171,0,0,0,4.79249710983165,0,17.1164286048862,3.76431397335706,2.67119219315498,5.90901178691655,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.858840442033979,1.00034104211935,2.17012018959788,1.45579603071565,1.60586089917446,0.473107245101804,1.63997980989798,3.00946099727719,6.82222512167955,2.0694614258501,4.64957918974806,4.42486004500088,3.21469373531907,0.391602314925481,1.71571711905428,0.413536052245775,0,0.213455115606889,0,1.66435439510497,0,1.48864684691266,0.153461973288062,1.12264037773229,1.40953064181271,0.511707249066704,3.05622450172854,0,4.62629081407967,5.68197521002007,5.58464660893902,3.63478100428535,5.22946703069817,0,1.00253235151642,0.184161977871793,1.49258782613989,4.73437036817464,2.22911505431021,0,1.00119938235739,0,0,1.26661954671451,1.13733384070897,0.170093705276516,0.647747748306418,0,0.812839312631559,0,0.764628819135115,0,0.447749509444357,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0,2.87132768998086,0,11.2478750890912,1.06337790121334,0.308097234229289,0.307007349452259,0.689182862422653,0.537101224341368,0.290033387828457,1.44885266607372,1.33548053470106,0,0,0.382838137483752,0.10115778085555,8.36721988735114,7.870308670766,6.2733354314454,2.7723022215848,1.06461206063404,3.47973196830029,8.52491407878032,3.2918723950658,2.60510858551767,1.89827654831236,2.09693213316207,1.02359116524534,0.42793898803392,2.54562598340749,0,0.899362287916574,0.274537029736055,1.41374882814824,1.41527737101321,1.58510321173008,2.10629228119491,0,10.2359665645139,4.22600587027022,3.8219975194236,1.41405431953713,0,6.61638412255349,3.3171948762061,5.69986150829892,0.578775534266688,1.31178950409327,8.52223583243357,7.12594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|phase1_expression=1.81678379270557,0.856402095563933,1.12763523276777,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0.697801167972428,0.655324116390517,2.63766978228454,1.36142988256051,1.98838425436749,2.6893005858071,3.01347264011988,2.92124036154949,5.85519358548608,1.72369481307503,1.02000345622126,2.5076377718247,0.286235987131057,0.547497700291537,0.251085279189606,0.458480434487708,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0.574752439954483,1.32208974556972,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.328875809207352,0.552700035571697,0.579606171470105,0.889719378972363,0.267540828089713,1.04535523804977,0.453237370790265,0,0,0,4.77848121486145,3.90650072313851,1.90090408889675,1.95747654801105,3.83959833463255,1.24930726552346,2.60454977248419,0.821127996921047,1.20964045934839,0.802320587350522,2.02754165435919,2.43806866313962,0.670700859703636,0,3.61439152384566,1.00267582127178,2.17269778441236,4.7717156823066,7.78615792484217,3.02511414925017,4.21285855178871,1.22968699970376,0.523916301990851,0,1.11235332835329,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,2.48485975847659,0.886413581652058,3.17782033951725,1.43418310374407,2.12801029319014,0.560677600142307,1.06748995729705,1.97334038733728,0.311211035399766,0.269421344139376,0.817309515567294,2.57307626996383,0,0.70296429550139,2.49728061464256,0.570471821544449,2.83952493048422,2.58355897016283,2.26622122115384,2.66856532734272,1.02077085627447,2.33385202892359,0.723280468230358,10.6920257155385,13.1051472517635,0.910161361938026,2.15585442544872,1.0100166837244,2.00189631795143,1.93944880838928,7.46261955497424,7.35570709917647,15.3242820084729,0.907457465280168,1.97328599257748,1.2813443329114,2.11931901159562,1.80054657650641,2.26715564324566,1.54584324027377,2.04728541964749,2.02531598689519,2.04617710838517,1.51460264546469,1.84099797284599,2.10139873864455,3.90510551768276,3.72782763442269,1.01736355386293,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,4.69348596989448,4.5026865673502,4.14404764057442,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,4.20725321410337,0,0,0,0,0,0.441463099414651,0,4.28919525746314,0.439001141634502,0,1.70899253099772,0.740707561268237,0.977424915930974,0,4.3299402607582,2.66639931442677,5.63561732331944,0.433099343283221,0.462985512576611,0,0,0,0,0,0,2.81201501960331,1.6798212819886,1.27597587518148,1.25381931783988,1.74380363108377,1.91691339582606,0.492663237895943,0.088048434013226,0,0,0,0.317489471460845,0.381988425558278,1.17217447210047,0,0.205654985406647,0.600686115687835,0,2.46688385559794,2.1798003441664,4.9870034358246,5.8172272091,0,3.381211010224,5.05282421511254,4.16029747645464,1.28603687131071,4.25547396069835,3.19706614819319,0.142977993658148,0.542621605391443,0,3.90883421152482,0,0.791951872933429,0.602878754119172,2.61460037580088,0.299918973546171,0,0,0,4.79249710983165,0,17.1164286048862,3.76431397335706,2.67119219315498,5.90901178691655,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.858840442033979,1.00034104211935,2.17012018959788,1.45579603071565,1.60586089917446,0.473107245101804,1.63997980989798,3.00946099727719,6.82222512167955,2.0694614258501,4.64957918974806,4.42486004500088,3.21469373531907,0.391602314925481,1.71571711905428,0.413536052245775,0,0.213455115606889,0,1.66435439510497,0,1.48864684691266,0.153461973288062,1.12264037773229,1.40953064181271,0.511707249066704,3.05622450172854,0,4.62629081407967,5.68197521002007,5.58464660893902,3.63478100428535,5.22946703069817,0,1.00253235151642,0.184161977871793,1.49258782613989,4.73437036817464,2.22911505431021,0,1.00119938235739,0,0,1.26661954671451,1.13733384070897,0.170093705276516,0.647747748306418,0,0.812839312631559,0,0.764628819135115,0,0.447749509444357,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.103041011647722,0.0915694648183434,0,2.87132768998086,0,11.2478750890912,1.06337790121334,0.308097234229289,0.307007349452259,0.689182862422653,0.537101224341368,0.290033387828457,1.44885266607372,1.33548053470106,0,0,0.382838137483752,0.10115778085555,8.36721988735114,7.870308670766,6.2733354314454,2.7723022215848,1.06461206063404,3.47973196830029,8.52491407878032,3.2918723950658,2.60510858551767,1.89827654831236,2.09693213316207,1.02359116524534,0.42793898803392,2.54562598340749,0,0.899362287916574,0.274537029736055,1.41374882814824,1.41527737101321,1.58510321173008,2.10629228119491,0,10.2359665645139,4.22600587027022,3.8219975194236,1.41405431953713,0,6.61638412255349,3.3171948762061,5.69986150829892,0.578775534266688,1.31178950409327,8.52223583243357,7.12594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| ||
|short_description=p5@NT5E | |||
}} | }} |
Latest revision as of 01:05, 20 September 2015
Short description: | p5@NT5E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NT5E_5end |
Coexpression cluster: | NA |
Association with transcript: | 174bp_to_ENST00000369647, NM_001204813, NM_002526, uc003pkn.2, uc003pko.3, uc010kbr.2_5end |
EntrezGene: | NT5E |
HGNC: | 8021 |
UniProt: | E9PGM0B3KQI8P21589Q6NZX3Q96B60 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.79e-18 | 32 |
muscle precursor cell | 5.91e-17 | 58 |
myoblast | 5.91e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.91e-17 | 58 |
smooth muscle cell | 6.37e-17 | 43 |
smooth muscle myoblast | 6.37e-17 | 43 |
muscle cell | 5.01e-15 | 55 |
multi fate stem cell | 7.72e-14 | 427 |
somatic stem cell | 1.98e-13 | 433 |
stem cell | 2.25e-12 | 441 |
fibroblast | 2.65e-12 | 76 |
electrically responsive cell | 3.02e-12 | 61 |
electrically active cell | 3.02e-12 | 61 |
skin fibroblast | 8.16e-09 | 23 |
aortic smooth muscle cell | 1.37e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.56e-10 | 14 |