FFCP PHASE1:Hg19::chrX:153191709..153191767,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:153191709..153191767,- to FFCP PHASE1:Hg19::chrX:153191709..153191767,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=393 | |EntrezGene=393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=674 | |HGNC=674 | ||
|TSSclassifier=strong | |||
|UniProt=Q86UY3,F8WAR0,P98171 | |UniProt=Q86UY3,F8WAR0,P98171 | ||
|association_with_transcript=0bp_to_ENST00000370028,ENST00000404127,NM_001164741,NM_001666_5end | |||
|cluster_id=chrX:153191709..153191767,- | |||
|coexpression_cluster_id=C805 | |||
|description=CAGE_peak_2_at_ARHGAP4_5end | |||
|id=chrX:153191709..153191767,- | |||
|ontology_enrichment_celltype=CL:0000037!3.04e-68!172;CL:0000566!3.04e-68!172;CL:0000988!4.96e-66!182;CL:0002032!1.86e-63!165;CL:0000837!1.86e-63!165;CL:0000738!3.56e-57!140;CL:0002087!1.06e-48!119;CL:0002031!4.24e-47!124;CL:0000763!5.06e-36!112;CL:0000049!5.06e-36!112;CL:0000766!6.91e-28!76;CL:0000542!4.25e-24!53;CL:0000051!4.25e-24!53;CL:0000838!8.04e-24!52;CL:0000557!2.07e-23!71;CL:0000839!1.24e-22!70;CL:0002057!4.08e-22!42;CL:0002194!1.00e-21!63;CL:0000576!1.00e-21!63;CL:0000040!1.00e-21!63;CL:0000559!1.00e-21!63;CL:0002009!2.21e-21!65;CL:0000860!8.59e-19!45;CL:0000084!1.78e-13!25;CL:0000827!1.78e-13!25;CL:0000791!9.24e-12!18;CL:0000789!9.24e-12!18;CL:0002420!9.24e-12!18;CL:0002419!9.24e-12!18;CL:0000790!9.24e-12!18;CL:0000945!6.52e-10!24;CL:0000826!6.52e-10!24;CL:0000236!5.85e-08!14;CL:0000625!1.91e-07!11;CL:0002393!2.71e-07!9;CL:0002397!2.71e-07!9;CL:0000134!3.71e-07!358;CL:0002320!6.00e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.28e-16;48!CL:0000860;3.50e-16;33!CL:0002057;3.50e-16;33!CL:0002087;4.79e-16;104!CL:0000473;8.16e-16;39!CL:0000234;8.16e-16;39!CL:0000542;1.75e-15;53!CL:0000766;6.30e-15;69!CL:0000084;1.55e-14;25!CL:0000763;1.50e-13;100!CL:0000738;1.61e-13;136!CL:0000791;1.13e-12;18!CL:0000789;1.13e-12;18!CL:0002419;1.13e-12;18!CL:0000988;1.34e-12;177!CL:0000945;1.25e-10;24!CL:0000236;1.96e-08;13!CL:0000625;5.66e-08;11!CL:0000094;8.69e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.93e-78,168;CL:0000988,6.89e-76,177;CL:0002032,3.82e-73,161;CL:0000837,3.82e-73,161;CL:0000738,1.70e-66,136;CL:0002087,6.19e-58,115;CL:0002031,6.11e-56,120;CL:0000763,8.22e-43,108;CL:0000049,8.22e-43,108;CL:0000766,6.09e-35,72;CL:0000557,9.68e-30,67;CL:0000839,7.78e-29,66;CL:0002194,4.70e-28,59;CL:0000576,4.70e-28,59;CL:0000040,4.70e-28,59;CL:0000559,4.70e-28,59;CL:0002009,1.56e-27,61;CL:0000473,1.79e-26,48;CL:0000234,1.79e-26,48;CL:0000542,4.25e-26,53;CL:0000051,4.25e-26,53;CL:0000838,8.50e-26,52;CL:0000860,6.13e-24,42;CL:0002057,6.13e-24,42;CL:0000084,1.57e-14,25;CL:0000827,1.57e-14,25;CL:0000791,1.16e-12,18;CL:0000789,1.16e-12,18;CL:0002420,1.16e-12,18;CL:0002419,1.16e-12,18;CL:0000790,1.16e-12,18;CL:0000945,1.19e-10,24;CL:0000826,1.19e-10,24;CL:0000236,1.58e-08,14;CL:0000134,2.42e-08,354;CL:0000625,5.72e-08,11;CL:0002393,8.40e-08,9;CL:0002397,8.40e-08,9;CL:0002320,1.39e-07,361;CL:0000094,8.46e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-17;42!CL:0000051;1.75e-15;53!CL:0000790;1.13e-12;18!CL:0000049;2.75e-12;108 | |||
|ontology_enrichment_disease=DOID:2531!1.59e-13!51;DOID:0060083!1.59e-13!51;DOID:1240!5.64e-12!39;DOID:8692!1.57e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.06e-10;39!DOID:8692;6.87e-10;31!DOID:2531;3.75e-09;51!DOID:0060083;3.75e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.90e-15,51;DOID:0060083,7.90e-15,51;DOID:1240,6.77e-13,39;DOID:8692,3.08e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.05e-29!102;UBERON:0003061!1.05e-29!102;UBERON:0002193!7.19e-27!112;UBERON:0002371!8.61e-20!80;UBERON:0001474!1.17e-16!86;UBERON:0002405!5.35e-14!115;UBERON:0004765!1.57e-11!101;UBERON:0001434!1.57e-11!101;UBERON:0000178!2.70e-08!15;UBERON:0000179!2.70e-08!15;UBERON:0000463!2.70e-08!15;UBERON:0003081!8.18e-08!216;UBERON:0007023!1.75e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.66e-09;15!UBERON:0000179;6.66e-09;15!UBERON:0000463;6.66e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.26e-36,98;UBERON:0003061,1.26e-36,98;UBERON:0002193,9.94e-32,108;UBERON:0002371,2.19e-25,76;UBERON:0002405,4.11e-24,93;UBERON:0001474,5.42e-22,82;UBERON:0004765,1.05e-17,90;UBERON:0001434,2.22e-13,100;UBERON:0003081,6.74e-10,203;UBERON:0000178,6.83e-09,15;UBERON:0000179,6.83e-09,15;UBERON:0000463,6.83e-09,15;UBERON:0002384,4.49e-07,371;UBERON:0007023,5.63e-07,114 | |||
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| ||
|short_description=p2@ARHGAP4 | |||
}} | }} |
Latest revision as of 01:15, 20 September 2015
Short description: | p2@ARHGAP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGAP4_5end |
Coexpression cluster: | C805_granulocyte_acute_CD14_Eosinophils_Dendritic_Peripheral_Basophils |
Association with transcript: | 0bp_to_ENST00000370028, ENST00000404127, NM_001164741, NM_001666_5end |
EntrezGene: | ARHGAP4 |
HGNC: | 674 |
UniProt: | Q86UY3F8WAR0P98171 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.26e-36 | 98 |
blood island | 1.26e-36 | 98 |
hemolymphoid system | 9.94e-32 | 108 |
bone marrow | 2.19e-25 | 76 |
immune system | 4.11e-24 | 93 |
bone element | 5.42e-22 | 82 |
skeletal element | 1.05e-17 | 90 |
skeletal system | 2.22e-13 | 100 |
lateral plate mesoderm | 6.74e-10 | 203 |
blood | 6.83e-09 | 15 |
haemolymphatic fluid | 6.83e-09 | 15 |
organism substance | 6.83e-09 | 15 |
connective tissue | 4.49e-07 | 371 |
adult organism | 5.63e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.90e-15 | 51 |
immune system cancer | 7.90e-15 | 51 |
leukemia | 6.77e-13 | 39 |
myeloid leukemia | 3.08e-10 | 31 |