FFCP PHASE1:Hg19::chr11:72353451..72353492,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:72353451..72353492,- to FFCP PHASE1:Hg19::chr11:72353451..72353492,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5138 | |EntrezGene=5138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8777 | |HGNC=8777 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMR1,F5H3Z7,F5H2R8 | |UniProt=Q6ZMR1,F5H3Z7,F5H2R8 | ||
|association_with_transcript=0bp_to_ENST00000376450,ENST00000536308,ENST00000539367,ENST00000541998,ENST00000543575_5end | |||
|cluster_id=chr11:72353451..72353492,- | |||
|description=CAGE_peak_1_at_PDE2A_5end | |||
|id=chr11:72353451..72353492,- | |||
|ontology_enrichment_celltype=CL:0000115!2.31e-14!35;CL:0002139!9.31e-14!24;CL:0002078!4.25e-11!44;CL:0000071!3.85e-10!18;CL:0002546!3.85e-10!18;CL:0000213!1.62e-07!57;CL:0000215!1.62e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.26e-18;24!CL:0000115;4.79e-15;36!CL:0000071;5.01e-13;18!CL:0002078;6.62e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.40e-18,24;CL:0000115,4.63e-18,36;CL:0000071,3.50e-13,18;CL:0002546,3.50e-13,18;CL:0002078,3.93e-13,45;CL:0000213,2.45e-09,58;CL:0000215,2.45e-09,58 | |||
|ontology_enrichment_development_v019=CL:0002546;5.01e-13;18!UBERON:0006601;1.07e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.01e-46!115;UBERON:0004111!1.14e-23!241;UBERON:0001049!5.43e-23!57;UBERON:0005068!5.43e-23!57;UBERON:0006241!5.43e-23!57;UBERON:0007135!5.43e-23!57;UBERON:0000025!1.48e-22!194;UBERON:0003080!1.19e-21!42;UBERON:0000073!4.40e-21!94;UBERON:0001016!4.40e-21!94;UBERON:0001017!5.42e-21!82;UBERON:0002780!7.13e-21!41;UBERON:0001890!7.13e-21!41;UBERON:0006240!7.13e-21!41;UBERON:0005743!2.55e-20!86;UBERON:0000955!1.99e-19!69;UBERON:0006238!1.99e-19!69;UBERON:0002616!4.97e-19!59;UBERON:0000477!1.90e-18!286;UBERON:0001893!3.75e-18!34;UBERON:0002020!1.18e-17!34;UBERON:0003528!1.18e-17!34;UBERON:0002791!2.01e-17!33;UBERON:0001869!2.93e-17!32;UBERON:0002619!3.71e-17!22;UBERON:0003075!4.91e-16!86;UBERON:0007284!4.91e-16!86;UBERON:0001950!5.62e-16!20;UBERON:0000467!6.12e-15!625;UBERON:0002346!7.53e-15!90;UBERON:0000480!9.41e-15!626;UBERON:0000956!1.42e-14!25;UBERON:0000203!1.42e-14!25;UBERON:0000468!3.13e-14!659;UBERON:0000119!5.49e-13!312;UBERON:0000922!8.47e-13!612;UBERON:0003056!1.24e-12!61;UBERON:0000483!2.36e-12!309;UBERON:0002050!9.73e-12!605;UBERON:0005423!9.73e-12!605;UBERON:0000923!2.14e-11!604;UBERON:0005291!2.14e-11!604;UBERON:0006598!2.14e-11!604;UBERON:0002532!2.14e-11!604;UBERON:0000153!2.37e-10!129;UBERON:0007811!2.37e-10!129;UBERON:0001986!3.85e-10!18;UBERON:0004638!3.85e-10!18;UBERON:0004852!3.85e-10!18;UBERON:0004121!5.15e-10!169;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0000033!1.70e-09!123;UBERON:0000487!3.84e-09!22;UBERON:0000055!1.21e-07!69;UBERON:0001871!4.71e-07!7;UBERON:0006914!4.74e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.05e-22;22!UBERON:0001950;4.39e-21;20!UBERON:0001869;3.52e-19;32!UBERON:0001893;5.00e-19;34!UBERON:0000956;6.03e-19;25!UBERON:0000203;6.03e-19;25!UBERON:0002791;9.07e-19;32!UBERON:0002780;1.06e-18;41!UBERON:0001890;1.06e-18;41!UBERON:0003528;1.65e-18;34!UBERON:0002020;1.65e-18;34!UBERON:0000073;3.83e-15;53!UBERON:0002616;3.83e-15;53!UBERON:0007023;1.52e-14;114!UBERON:0004638;5.01e-13;18!UBERON:0001986;5.01e-13;18!UBERON:0004852;5.01e-13;18!UBERON:0000487;2.98e-11;22!UBERON:0001017;1.91e-10;75!UBERON:0000955;2.26e-10;68!UBERON:0001016;1.66e-09;83!UBERON:0006914;3.66e-09;25!UBERON:0001871;4.47e-08;6!UBERON:0000200;1.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.90e-57,114;UBERON:0001049,1.46e-25,56;UBERON:0005068,1.46e-25,56;UBERON:0006241,1.46e-25,56;UBERON:0007135,1.46e-25,56;UBERON:0000073,2.03e-25,53;UBERON:0002616,2.03e-25,53;UBERON:0002780,3.12e-25,41;UBERON:0001890,3.12e-25,41;UBERON:0003080,3.12e-25,41;UBERON:0006240,3.12e-25,41;UBERON:0001017,1.02e-23,81;UBERON:0001016,2.99e-23,89;UBERON:0002619,1.07e-22,22;UBERON:0001893,1.22e-22,34;UBERON:0004111,4.32e-22,240;UBERON:0003528,5.50e-22,34;UBERON:0002020,5.50e-22,34;UBERON:0000955,1.60e-21,68;UBERON:0006238,1.60e-21,68;UBERON:0001869,1.98e-21,32;UBERON:0001950,4.30e-21,20;UBERON:0002791,4.45e-21,32;UBERON:0000025,1.34e-20,192;UBERON:0000956,6.15e-19,25;UBERON:0000203,6.15e-19,25;UBERON:0003075,4.40e-18,82;UBERON:0007284,4.40e-18,82;UBERON:0002346,4.10e-17,86;UBERON:0003056,1.66e-15,61;UBERON:0011216,2.60e-14,223;UBERON:0004638,3.50e-13,18;UBERON:0001986,3.50e-13,18;UBERON:0004852,3.50e-13,18;UBERON:0010371,4.23e-13,104;UBERON:0010314,4.13e-12,132;UBERON:0000487,2.20e-11,22;UBERON:0004121,1.05e-10,171;UBERON:0000924,1.05e-10,171;UBERON:0006601,1.05e-10,171;UBERON:0000119,1.08e-09,309;UBERON:0000483,2.48e-09,306;UBERON:0006914,2.85e-09,25;UBERON:0002050,1.47e-08,564;UBERON:0000923,1.58e-08,560;UBERON:0010316,1.58e-08,560;UBERON:0005291,1.58e-08,560;UBERON:0006598,1.58e-08,560;UBERON:0010317,1.58e-08,560;UBERON:0002532,1.58e-08,560;UBERON:0000922,3.75e-08,592;UBERON:0001871,4.52e-08,6;UBERON:0005423,4.54e-08,581;UBERON:0000200,1.87e-07,6;UBERON:0000055,2.06e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.522371256399677,0.737201809504527,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0,0.369363174230364,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0.464448369948228,0,0,0.739508020333575,0,0,0,0,0.200544447470142,0,0.447830948479849,0,0.257575567634187,1.01778767145695,1.88937971844405,1.21292030593908,1.16214518452842,3.70051099219643,2.78735733805593,0.28769239232215,1.5369642391746,0,1.03423704220986,1.29096936716765,1.35426486594342,1.50593871634084,5.18521685109907,0.224723484445085,1.53041946185451,1.60464513538047,0,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0.251248665256743,2.08593167368081,0,2.42159801053347,0,0,0,0,0.209658645508376,0,0,0.32145117339416,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0,0,0,0,0,0,0,0.087834785693126,11.1332214173056,0,0,0,0,0,0,0,0,4.96906018416763,7.74211135595512,3.12426451446835,5.6530794192401,6.29249154314859,1.92582629358047,1.67195973229448,24.2911753619169,14.5864167701551,16.4013100254688,30.212198783186,53.9793195060144,76.8795481276734,20.5891324993686,2.43042584364528,9.82297011124877,15.2679973385795,12.4998743336488,10.7321646226118,6.6448596169769,14.2897360265718,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,1.21239604862719,0.490385709340376,0.151357427644931,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,2.12586938479627,0.818238361772504,0,0.121973706129595,0,0.348581828608555,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,138.035070014809,16.8290128564135,1.2347220339942,0,0,0,22.4500164538934,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,17.1796072835678,9.72269576410883,16.3618570921755,0.790204397959275,0,0.984868024349589,0.234004265139238,0.297262324577456,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.581267877027924,1.53353071666084,0,0.704387472105808,2.28060927094849,0.720599767084807,0.50496973370552,0,0,0,1.71072446022705,0,0,0,1.56983518083505,6.5394010324992,0.7333828582095,0,10.7296933755565,3.381211010224,0,0,0,0,0,0.428933980974443,0,0,1.62868092146868,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.336255431980582,0,0,0,1.52456774533478,1.30139853857622,5.41302168944387,2.51274398001523,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37257369524342,0.620304078368662,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0.519254429183621,0,0,0.200506470303285,0.460404944679482,0,0,0,0,0,0,0,0,94.3987087788442,34.0187410553031,17.4891892042733,67.8599911837273,0,0,0.764628819135115,1.66215201785745,0,0,0,0,0,0.325378394664303,9.89193711818134,0,0,0.574265537996172,0,0,0,0,0,0.275673144969061,0,0.145016693914229,0.0852266274161009,3.11612124763581,0.165284915360978,2.11409074101617,1.53135254993501,0.809262246844399,0,0,0,1.54016790088044,0,0,0.18532421910392,0.286249773483982,0,0,0,0,0,0,4.70969184119538,0,0,0.117812402345686,0.606547444719948,3.17020642346017,0,0,0.974853958525138,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0,0.202910376962704,0.92947049429925,0.281695602532241,0,0,0,0,0,0,0,0,0.288666338176536,0,0,8.00222306602623,0.43050537267123,0,2.21715076768338,1.37834040124176,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.3869271149236,0,0,73.8753981696674,0,1.48482340416319,0,42.7483488539508,23.7731313733767,0.556543525114529,0,0,10.3608953890556,9.39365312805902,0,0,0,0,0.0898683511473268,0.895105873378046,0,14.0073636004446,0,0,37.8039770977135,22.5426478533299,41.9188975802508,0.260427761085233,0,73.2249571189141,0,0,0.236387681767936,4.48166385213904,0,0.347249989866585,0.885741385813839,4.10027891326387,0,2.76448149828062,1.47773809476774,26.9844038499386,0,0,16.9290568708354,0,0,0,0.108647371922008,6.06102203490647,0,6.39641731222362,0,0,0.166211681900156,0.451191321234361,0.588187602953219,1.00692952185506,0.189753732724185,0,0,0.979396848954886,0,0,13.9336670350991,12.0302287724541,15.2757536233406,0.296521128680622,0,0,6.94231669700974,21.6695964770673,1.1713222286267,0,0,0.485560759068186,5.91876604274086,9.67925728389311,19.5886567443514,11.1208380146139,0,0,0,0.330991955875499,0.941798755221676,1.19472429772959,0,0.138674673013139,0,0,0.34823682632161,8.73633341210151,0,16.6420889817226,12.6444518559101,17.4084768952804,6.4982641047241,0,12.6549214837098,3.83717389010903,0,38.4296531452184,0,0.480952921509202,14.3013506475366,0,0.144090417154106,0,0.171594997861965,0.720273989940749,0.124252535565433,0.471388069233591,0.135904206073614,0.313808538937,0,0,2.40168115483916,6.98217432349165,0,0,0,17.0362264776075,13.749625440701,33.740032155110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| ||
|short_description=p1@PDE2A | |||
}} | }} |
Latest revision as of 01:20, 20 September 2015
Short description: | p1@PDE2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376450, ENST00000536308, ENST00000539367, ENST00000541998, ENST00000543575_5end |
EntrezGene: | PDE2A |
HGNC: | 8777 |
UniProt: | Q6ZMR1F5H3Z7F5H2R8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.40e-18 | 24 |
endothelial cell | 4.63e-18 | 36 |
blood vessel endothelial cell | 3.50e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.50e-13 | 18 |
meso-epithelial cell | 3.93e-13 | 45 |
lining cell | 2.45e-09 | 58 |
barrier cell | 2.45e-09 | 58 |