FFCP PHASE1:Hg19::chr3:123383492..123383500,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4638 | |EntrezGene=4638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7590 | |HGNC=7590 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-387bp_to_uc010hrr.2_5end | |association_with_transcript=-387bp_to_uc010hrr.2_5end | ||
|cluster_id=chr3:123383492..123383500,- | |||
|description=CAGE_peak_57_at_MYLK_5end | |description=CAGE_peak_57_at_MYLK_5end | ||
|id=chr3:123383492..123383500,- | |id=chr3:123383492..123383500,- | ||
|ontology_enrichment_celltype=CL:0000359!6.73e-21!32;CL:0000192!2.43e-20!42;CL:0000514!2.43e-20!42;CL:0000680!2.41e-18!57;CL:0000056!2.41e-18!57;CL:0000355!2.41e-18!57;CL:0000187!4.62e-15!54;CL:0002580!7.01e-14!3;CL:0000183!1.69e-13!59;CL:0000393!3.22e-13!60;CL:0000211!3.22e-13!60;CL:0000222!3.40e-10!119;CL:0000055!3.43e-10!180;CL:0002589!8.99e-10!2;CL:0002334!4.66e-09!12;CL:0002595!5.86e-09!5;CL:0000048!4.62e-08!430;CL:0000723!7.79e-08!436;CL:0002539!1.13e-07!10;CL:0000034!1.53e-07!444;CL:0002579!6.56e-07!3 | |ontology_enrichment_celltype=CL:0000359!6.73e-21!32;CL:0000192!2.43e-20!42;CL:0000514!2.43e-20!42;CL:0000680!2.41e-18!57;CL:0000056!2.41e-18!57;CL:0000355!2.41e-18!57;CL:0000187!4.62e-15!54;CL:0002580!7.01e-14!3;CL:0000183!1.69e-13!59;CL:0000393!3.22e-13!60;CL:0000211!3.22e-13!60;CL:0000222!3.40e-10!119;CL:0000055!3.43e-10!180;CL:0002589!8.99e-10!2;CL:0002334!4.66e-09!12;CL:0002595!5.86e-09!5;CL:0000048!4.62e-08!430;CL:0000723!7.79e-08!436;CL:0002539!1.13e-07!10;CL:0000034!1.53e-07!444;CL:0002579!6.56e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002539;1.61e-26;10!CL:0002568;3.16e-18;1!CL:0000359;8.01e-17;32!CL:0002595;2.41e-14;5!CL:0000192;9.57e-13;43!CL:0000187;1.77e-08;55!CL:0002579;9.37e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.96e-26,10;CL:0000359,2.44e-18,32;CL:0002568,3.16e-18,1;CL:0002595,2.41e-14,5;CL:0000192,1.29e-13,43;CL:0000514,1.29e-13,43;CL:0000187,1.32e-10,55;CL:0000680,4.78e-10,58;CL:0000056,4.78e-10,58;CL:0000355,4.78e-10,58;CL:0000393,1.53e-09,61;CL:0000211,1.53e-09,61;CL:0002579,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;9.57e-13;43!CL:0000355;2.80e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!5.54e-25!14;DOID:120!3.74e-12!27;DOID:193!3.35e-11!29 | |ontology_enrichment_disease=DOID:2394!5.54e-25!14;DOID:120!3.74e-12!27;DOID:193!3.35e-11!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.07e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.02e-11,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004237;1.61e-26;10!UBERON:0004695;1.61e-26;10!UBERON:0002111;1.61e-26;10!UBERON:0004178;1.61e-26;10!UBERON:0001135;7.88e-18;15!UBERON:0004573;3.34e-15;33!UBERON:0004571;3.34e-15;33!UBERON:0003834;2.41e-14;5!UBERON:0001533;2.41e-14;5!UBERON:0000947;7.64e-13;21!UBERON:0010191;7.64e-13;21!UBERON:0001637;3.65e-12;42!UBERON:0003509;3.65e-12;42!UBERON:0004572;3.65e-12;42!UBERON:0003513;1.61e-10;7!UBERON:0002385;4.40e-09;31!UBERON:0001015;4.40e-09;31!UBERON:0000383;4.40e-09;31!UBERON:0007500;6.15e-07;56!UBERON:0001981;6.15e-07;56!UBERON:0004537;6.15e-07;56 | |||
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|short_description=p57@MYLK | |short_description=p57@MYLK | ||
}} | }} |
Latest revision as of 01:28, 20 September 2015
Short description: | p57@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_57_at_MYLK_5end |
Coexpression cluster: | NA |
Association with transcript: | -387bp_to_uc010hrr.2_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.96e-26 | 10 |
vascular associated smooth muscle cell | 2.44e-18 | 32 |
mesenchymal stem cell of Wharton's jelly | 3.16e-18 | 1 |
smooth muscle cell of the subclavian artery | 2.41e-14 | 5 |
smooth muscle cell | 1.29e-13 | 43 |
smooth muscle myoblast | 1.29e-13 | 43 |
muscle cell | 1.32e-10 | 55 |
muscle precursor cell | 4.78e-10 | 58 |
myoblast | 4.78e-10 | 58 |
multi-potent skeletal muscle stem cell | 4.78e-10 | 58 |
electrically responsive cell | 1.53e-09 | 61 |
electrically active cell | 1.53e-09 | 61 |
omentum preadipocyte | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.02e-11 | 14 |