FFCP PHASE1:Hg19::chr2:216248785..216248799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000480737_5end | |association_with_transcript=3bp_to_ENST00000480737_5end | ||
|cluster_id=chr2:216248785..216248799,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_32_at_FN1_5end | |description=CAGE_peak_32_at_FN1_5end | ||
|id=chr2:216248785..216248799,- | |id=chr2:216248785..216248799,- | ||
|ontology_enrichment_celltype=CL:0000055!4.52e-31!180;CL:0000057!3.23e-24!75;CL:0002371!4.03e-14!591;CL:0000680!3.37e-13!57;CL:0000056!3.37e-13!57;CL:0000355!3.37e-13!57;CL:0000183!8.04e-13!59;CL:0000144!4.54e-12!625;CL:0000187!8.10e-12!54;CL:0002620!4.41e-10!23;CL:0000222!3.36e-09!119;CL:0000393!7.83e-09!60;CL:0000211!7.83e-09!60;CL:0000220!1.12e-08!246;CL:0002334!1.75e-08!12;CL:0000192!2.67e-08!42;CL:0000514!2.67e-08!42;CL:0002321!2.71e-08!248;CL:0000048!2.85e-08!430;CL:0000723!6.77e-08!436;CL:0000548!7.73e-08!679;CL:0000004!7.73e-08!679;CL:0000255!7.73e-08!679;CL:0002494!2.05e-07!16;CL:0000012!2.24e-07!682;CL:0000034!3.91e-07!444;CL:0000359!5.20e-07!32 | |ontology_enrichment_celltype=CL:0000055!4.52e-31!180;CL:0000057!3.23e-24!75;CL:0002371!4.03e-14!591;CL:0000680!3.37e-13!57;CL:0000056!3.37e-13!57;CL:0000355!3.37e-13!57;CL:0000183!8.04e-13!59;CL:0000144!4.54e-12!625;CL:0000187!8.10e-12!54;CL:0002620!4.41e-10!23;CL:0000222!3.36e-09!119;CL:0000393!7.83e-09!60;CL:0000211!7.83e-09!60;CL:0000220!1.12e-08!246;CL:0002334!1.75e-08!12;CL:0000192!2.67e-08!42;CL:0000514!2.67e-08!42;CL:0002321!2.71e-08!248;CL:0000048!2.85e-08!430;CL:0000723!6.77e-08!436;CL:0000548!7.73e-08!679;CL:0000004!7.73e-08!679;CL:0000255!7.73e-08!679;CL:0002494!2.05e-07!16;CL:0000012!2.24e-07!682;CL:0000034!3.91e-07!444;CL:0000359!5.20e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.73e-14;55!CL:0000723;5.58e-13;61!CL:0000048;4.54e-12;58!CL:0002620;2.41e-11;23!CL:0000057;6.17e-11;73!CL:0002320;3.44e-10;188!CL:0002334;6.09e-10;12!CL:0000349;1.06e-09;19!CL:0000034;1.16e-09;69!CL:0002494;3.90e-08;16!CL:0000187;4.58e-08;55!CL:0000499;9.33e-08;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.92e-27,76;CL:0000048,1.01e-20,427;CL:0000723,4.61e-20,433;CL:0000034,1.50e-18,441;CL:0000680,1.82e-14,58;CL:0000056,1.82e-14,58;CL:0000355,1.82e-14,58;CL:0000187,7.56e-13,55;CL:0002320,9.07e-12,361;CL:0002620,2.54e-11,23;CL:0000393,3.40e-10,61;CL:0000211,3.40e-10,61;CL:0002334,6.12e-10,12;CL:0000134,6.59e-10,354;CL:0000349,9.21e-10,19;CL:0000192,1.40e-08,43;CL:0000514,1.40e-08,43;CL:0002494,3.93e-08,16;CL:0000499,7.75e-08,28;CL:0000219,1.28e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;5.14e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.22e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.24e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.78e-16!83;UBERON:0002329!1.78e-16!83;UBERON:0003077!1.78e-16!83;UBERON:0003059!1.78e-16!83;UBERON:0007282!1.78e-16!83;UBERON:0009618!1.78e-16!83;UBERON:0007285!1.78e-16!83;UBERON:0005256!3.32e-15!143;UBERON:0004290!1.66e-14!70;UBERON:0000486!3.57e-14!82;UBERON:0001134!4.67e-12!61;UBERON:0002036!4.67e-12!61;UBERON:0003082!4.67e-12!61;UBERON:0002385!5.54e-12!63;UBERON:0001015!5.54e-12!63;UBERON:0000383!5.54e-12!63;UBERON:0004872!2.26e-11!84;UBERON:0003914!6.36e-11!118;UBERON:0002100!2.03e-10!216;UBERON:0002199!2.66e-10!45;UBERON:0002416!2.66e-10!45;UBERON:0003102!2.95e-10!95;UBERON:0002049!4.27e-10!79;UBERON:0007798!4.27e-10!79;UBERON:0000490!1.59e-09!138;UBERON:0001009!3.06e-09!113;UBERON:0004535!3.43e-09!110;UBERON:0000475!5.19e-09!365;UBERON:0002097!8.67e-09!40;UBERON:0001637!2.22e-08!42;UBERON:0003509!2.22e-08!42;UBERON:0004572!2.22e-08!42;UBERON:0000468!3.31e-08!659;UBERON:0004923!4.64e-08!57;UBERON:0000948!1.12e-07!24;UBERON:0005498!1.12e-07!24;UBERON:0004140!1.12e-07!24;UBERON:0009881!1.12e-07!24;UBERON:0004141!1.12e-07!24;UBERON:0003084!1.12e-07!24;UBERON:0007005!1.12e-07!24;UBERON:0004139!1.12e-07!24;UBERON:0004291!1.12e-07!24;UBERON:0000055!1.16e-07!69;UBERON:0000119!1.42e-07!312;UBERON:0007100!2.13e-07!27;UBERON:0000483!3.20e-07!309;UBERON:0001981!4.21e-07!60;UBERON:0007500!4.21e-07!60;UBERON:0004537!4.21e-07!60;UBERON:0006965!4.21e-07!60;UBERON:0001013!9.12e-07!14 | |ontology_enrichment_uberon=UBERON:0000914!1.78e-16!83;UBERON:0002329!1.78e-16!83;UBERON:0003077!1.78e-16!83;UBERON:0003059!1.78e-16!83;UBERON:0007282!1.78e-16!83;UBERON:0009618!1.78e-16!83;UBERON:0007285!1.78e-16!83;UBERON:0005256!3.32e-15!143;UBERON:0004290!1.66e-14!70;UBERON:0000486!3.57e-14!82;UBERON:0001134!4.67e-12!61;UBERON:0002036!4.67e-12!61;UBERON:0003082!4.67e-12!61;UBERON:0002385!5.54e-12!63;UBERON:0001015!5.54e-12!63;UBERON:0000383!5.54e-12!63;UBERON:0004872!2.26e-11!84;UBERON:0003914!6.36e-11!118;UBERON:0002100!2.03e-10!216;UBERON:0002199!2.66e-10!45;UBERON:0002416!2.66e-10!45;UBERON:0003102!2.95e-10!95;UBERON:0002049!4.27e-10!79;UBERON:0007798!4.27e-10!79;UBERON:0000490!1.59e-09!138;UBERON:0001009!3.06e-09!113;UBERON:0004535!3.43e-09!110;UBERON:0000475!5.19e-09!365;UBERON:0002097!8.67e-09!40;UBERON:0001637!2.22e-08!42;UBERON:0003509!2.22e-08!42;UBERON:0004572!2.22e-08!42;UBERON:0000468!3.31e-08!659;UBERON:0004923!4.64e-08!57;UBERON:0000948!1.12e-07!24;UBERON:0005498!1.12e-07!24;UBERON:0004140!1.12e-07!24;UBERON:0009881!1.12e-07!24;UBERON:0004141!1.12e-07!24;UBERON:0003084!1.12e-07!24;UBERON:0007005!1.12e-07!24;UBERON:0004139!1.12e-07!24;UBERON:0004291!1.12e-07!24;UBERON:0000055!1.16e-07!69;UBERON:0000119!1.42e-07!312;UBERON:0007100!2.13e-07!27;UBERON:0000483!3.20e-07!309;UBERON:0001981!4.21e-07!60;UBERON:0007500!4.21e-07!60;UBERON:0004537!4.21e-07!60;UBERON:0006965!4.21e-07!60;UBERON:0001013!9.12e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.06e-09;198!UBERON:0002097;1.19e-07;41!UBERON:0002199;2.43e-07;46!UBERON:0002416;2.43e-07;46!UBERON:0000478;2.67e-07;24!UBERON:0005631;7.48e-07;10!UBERON:0000158;7.48e-07;10 | |||
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| ||
|short_description=p32@FN1 | |short_description=p32@FN1 | ||
}} | }} |
Latest revision as of 02:34, 20 September 2015
Short description: | p32@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 3bp_to_ENST00000480737_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.92e-27 | 76 |
multi fate stem cell | 1.01e-20 | 427 |
somatic stem cell | 4.61e-20 | 433 |
stem cell | 1.50e-18 | 441 |
muscle precursor cell | 1.82e-14 | 58 |
myoblast | 1.82e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.82e-14 | 58 |
muscle cell | 7.56e-13 | 55 |
connective tissue cell | 9.07e-12 | 361 |
skin fibroblast | 2.54e-11 | 23 |
electrically responsive cell | 3.40e-10 | 61 |
electrically active cell | 3.40e-10 | 61 |
preadipocyte | 6.12e-10 | 12 |
mesenchymal cell | 6.59e-10 | 354 |
extraembryonic cell | 9.21e-10 | 19 |
smooth muscle cell | 1.40e-08 | 43 |
smooth muscle myoblast | 1.40e-08 | 43 |
cardiocyte | 3.93e-08 | 16 |
stromal cell | 7.75e-08 | 28 |
motile cell | 1.28e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.24e-07 | 14 |