FFCP PHASE1:Hg19::chr2:216248853..216248891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-50bp_to_ENST00000480737_5end | |association_with_transcript=-50bp_to_ENST00000480737_5end | ||
|cluster_id=chr2:216248853..216248891,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_2_at_FN1_5end | |description=CAGE_peak_2_at_FN1_5end | ||
|id=chr2:216248853..216248891,- | |id=chr2:216248853..216248891,- | ||
|ontology_enrichment_celltype=CL:0000055!1.05e-36!180;CL:0000057!6.51e-23!75;CL:0000220!7.74e-16!246;CL:0002321!1.76e-15!248;CL:0000680!7.22e-15!57;CL:0000056!7.22e-15!57;CL:0000355!7.22e-15!57;CL:0000183!1.51e-14!59;CL:0002371!1.85e-14!591;CL:0000187!1.30e-13!54;CL:0000222!1.42e-13!119;CL:0000144!1.10e-12!625;CL:0000393!3.82e-12!60;CL:0000211!3.82e-12!60;CL:0002620!8.93e-10!23;CL:0000192!1.60e-09!42;CL:0000514!1.60e-09!42;CL:0000359!5.77e-08!32;CL:0000548!6.83e-08!679;CL:0000004!6.83e-08!679;CL:0000255!6.83e-08!679;CL:0002334!1.13e-07!12;CL:0000012!2.71e-07!682;CL:0002494!6.11e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.05e-36!180;CL:0000057!6.51e-23!75;CL:0000220!7.74e-16!246;CL:0002321!1.76e-15!248;CL:0000680!7.22e-15!57;CL:0000056!7.22e-15!57;CL:0000355!7.22e-15!57;CL:0000183!1.51e-14!59;CL:0002371!1.85e-14!591;CL:0000187!1.30e-13!54;CL:0000222!1.42e-13!119;CL:0000144!1.10e-12!625;CL:0000393!3.82e-12!60;CL:0000211!3.82e-12!60;CL:0002620!8.93e-10!23;CL:0000192!1.60e-09!42;CL:0000514!1.60e-09!42;CL:0000359!5.77e-08!32;CL:0000548!6.83e-08!679;CL:0000004!6.83e-08!679;CL:0000255!6.83e-08!679;CL:0002334!1.13e-07!12;CL:0000012!2.71e-07!682;CL:0002494!6.11e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.65e-12;55!CL:0000723;3.10e-11;61!CL:0000048;1.26e-10;58!CL:0002620;2.72e-10;23!CL:0000057;9.78e-10;73!CL:0002320;4.99e-09;188!CL:0000349;5.95e-09;19!CL:0000187;1.23e-08;55!CL:0000034;1.30e-08;69!CL:0002334;4.60e-08;12!CL:0000359;5.43e-08;32!CL:0000192;1.24e-07;43!CL:0002494;2.86e-07;16!CL:0000499;5.06e-07;28!CL:0000393;8.66e-07;61!CL:0000211;8.66e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.99e-25,76;CL:0000680,4.02e-16,58;CL:0000056,4.02e-16,58;CL:0000355,4.02e-16,58;CL:0002321,2.34e-15,250;CL:0000222,8.60e-15,121;CL:0000187,8.82e-15,55;CL:0000393,2.09e-12,61;CL:0000211,2.09e-12,61;CL:0000048,1.95e-10,427;CL:0000192,2.07e-10,43;CL:0000514,2.07e-10,43;CL:0002620,2.66e-10,23;CL:0000723,3.60e-10,433;CL:0000034,1.85e-09,441;CL:0000349,6.16e-09,19;CL:0000359,2.24e-08,32;CL:0002334,4.58e-08,12;CL:0002494,2.76e-07,16;CL:0000499,4.88e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;7.07e-09;58!CL:0000514;1.24e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.55e-20!143;UBERON:0000914!7.30e-18!83;UBERON:0002329!7.30e-18!83;UBERON:0003077!7.30e-18!83;UBERON:0003059!7.30e-18!83;UBERON:0007282!7.30e-18!83;UBERON:0009618!7.30e-18!83;UBERON:0007285!7.30e-18!83;UBERON:0004290!2.58e-16!70;UBERON:0000486!3.35e-16!82;UBERON:0003914!1.48e-15!118;UBERON:0000490!2.17e-14!138;UBERON:0002100!2.18e-14!216;UBERON:0000475!3.05e-14!365;UBERON:0001134!8.54e-14!61;UBERON:0002036!8.54e-14!61;UBERON:0003082!8.54e-14!61;UBERON:0004872!9.98e-14!84;UBERON:0000468!1.39e-13!659;UBERON:0002385!1.84e-13!63;UBERON:0001015!1.84e-13!63;UBERON:0000383!1.84e-13!63;UBERON:0000119!3.17e-12!312;UBERON:0002049!4.08e-12!79;UBERON:0007798!4.08e-12!79;UBERON:0000483!7.54e-12!309;UBERON:0003102!2.12e-11!95;UBERON:0002199!2.85e-10!45;UBERON:0002416!2.85e-10!45;UBERON:0001637!6.29e-10!42;UBERON:0003509!6.29e-10!42;UBERON:0004572!6.29e-10!42;UBERON:0000055!1.60e-09!69;UBERON:0000481!2.12e-09!347;UBERON:0001981!2.27e-09!60;UBERON:0007500!2.27e-09!60;UBERON:0004537!2.27e-09!60;UBERON:0006965!2.27e-09!60;UBERON:0003104!3.02e-09!238;UBERON:0009142!3.02e-09!238;UBERON:0004535!4.27e-09!110;UBERON:0001009!4.65e-09!113;UBERON:0000467!8.17e-09!625;UBERON:0000480!1.31e-08!626;UBERON:0002097!1.46e-08!40;UBERON:0004573!6.40e-08!33;UBERON:0004571!6.40e-08!33;UBERON:0004923!7.97e-08!57;UBERON:0000477!3.79e-07!286;UBERON:0001013!5.13e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.40e-08;198!UBERON:0001637;1.05e-07;42!UBERON:0003509;1.05e-07;42!UBERON:0004572;1.05e-07;42!UBERON:0004573;1.08e-07;33!UBERON:0004571;1.08e-07;33!UBERON:0001013;2.23e-07;14!UBERON:0002199;3.13e-07;46!UBERON:0002416;3.13e-07;46!UBERON:0002097;3.28e-07;41!UBERON:0000478;5.79e-07;24!UBERON:0002385;9.15e-07;31!UBERON:0001015;9.15e-07;31!UBERON:0000383;9.15e-07;31 | |||
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|phase1_expression=172.412781927758,371.678509474747,107.830119133418,280.205235388765,93.8618298297304,236.4037400312,78.5229622321763,81.4918636720612,12.7980957817921,8.10921990454979,6.97801167972428,53.9550189161526,87.3068697936181,52.3531673020997,50.3724011106432,85.3852935993755,74.1314269469492,58.4248072309899,57.0881374584893,9.60344252998946,16.5240559907845,15.6727360739044,4.57977579409691,4.24310717725941,15.5672873097555,0,0,0,0,0,1.23852898652861,0,1.50602959389125,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,394.967123428618,179.077129540871,58.0496030769628,39.3968676099177,87.2327964506448,78.5068132767665,454.903561713229,1378.14995269706,5.86115866417221,34.58978600416,24.2424008513028,1.5062593682237,0.728590576585084,0.370784442784429,0.649094787309367,0.174129737299267,0.26591592103773,0,0,0,1.98762407366705,7.74211135595512,7.98423153697467,20.3510859092643,30.2039594071132,35.2151093683286,8.56879362800923,6.46041897923322,6.04802646567407,14.7277069616455,6.0424397566372,1.52054421143703,10.7387305321195,3.30896772311282,83.4446206318212,3.30408994651095,2.91888184414021,1.68917220724983,1.53316637465883,2.84779697870439,6.77846452542507,0,0,8.72188104285069,273.334573432425,156.895203952414,225.492834924912,513.437551140377,99.6618153977383,39.2474320099615,132.368754704834,212.134091638758,46.6816553099649,56.578482269269,43.8077900344069,88.9981674552197,265.040925260799,6.56100009134631,144.217955495608,25.6712319695002,148.402539787938,19.96386476944,19.2628803798077,13.4832774434159,12.6575586178034,35.6219520204127,20.4585046728016,8.31602000097437,78.8781504398596,10.0117749813183,33.056434523547,30.8055088535941,20.7696742987461,2.49357703935765,25.8996796319694,79.9933147035441,39.2121333746218,56.7160915800105,198.763716343259,99.0906284118153,213.203492566519,215.765498084685,64.7169883617396,279.539985949508,83.1942347802207,132.320644477153,96.0728870889418,325.639568774908,99.8741400268948,101.190431568576,232.531283098382,51.8873305872347,54.598510723977,13.9147814277574,31.0930577473552,2.00763216772303,0.243947412259191,0.132529768321485,8.13357600086629,3.73179798055334,4.54177531576131,0.36497735907583,45.3703643756466,239.285629007753,27.6269842704961,378.924229274095,300.301864374548,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,1.4763109092493,11.2193419042757,34.983790963169,69.0940943512047,81.1232222859717,79.6090045508877,11.2250082269467,0,13.1597629241132,15.7842385474644,29.5228267749203,5.62008766288098,0.904760751704678,4.35165692245089,8.79682424337877,9.35941306751621,37.5261489265711,0.579652024875384,67.7448165740691,10.6831171343195,12.0376233269919,13.1275365041873,0.790204397959275,0,0,0,0,0,66.1849585103507,4.96212840348353,97.1709971325904,48.5358677318316,45.2391561414949,0,0,0,0,0,0.571481048629521,3.05590740446622,1.17217447210047,15.3965201420435,17.0693637887517,3.90445975197093,0.571652865261156,6.39147180768556,21.3620433728307,24.2749726067345,53.7770337552355,371.962703685958,107.353449574612,28.4553784745811,18.7213386440459,62.7585993199627,56.7396528093113,31.7042393029158,33.885784496981,126.973455661598,29.6366521241077,33.5508269822547,22.3896927707804,45.1412567572055,30.4453770830182,14.816068796205,6.49824442683371,2.43247561282381,0,35.8417697121154,168.935523121566,125.199510059184,12.8373214536647,94.2526306405941,178.764400618834,51.0323745233702,0,0,0,0,1.77866236955724,0,3.09315525111078,0.670065061337395,1.91381625495949,0,0,0,61.7138203347274,189.064456960558,59.4070401902421,147.451340825342,366.49314298937,111.81101225906,127.918425172043,44.5400227597024,4.5481500811197,68.2922270530533,92.9915837949611,59.3668722704284,49.5236602468072,45.0342662164303,59.3638123192781,0,0,0,7.27506171471023,178.085920276232,79.5286471457059,320.55528770186,344.061744111836,516.414573756855,133.777271822952,196.495583641614,295.327799219663,203.332751029638,107.946785661859,139.918639546744,31.2083192852475,51.4061884891785,62.637393989918,21.8755603760836,199.704444422072,0.460404944679482,25.2591785962135,53.8989857299882,61.2351017860511,4.06079651616671,9.24184045252977,3.13739907670742,23.3822759445217,14.3550215294311,5.68666920354483,4.25234263191289,33.6828829119337,27.7609054842521,32.2426260677185,22.5760398234684,3.56826782263054,1.66215201785745,4.70136984916574,0,0,1.02580050046556,11.8085272451894,6.83294628795036,12.3649213977267,1.19040304263846,0.41254749960294,5.16838984196555,14.95138565884,61.0598933407806,34.2214342754112,45.906487900164,61.0944625409996,30.5997190915658,150.280922570715,156.618029427367,51.9882427238215,49.6798758908794,107.765764815358,53.2366486601344,29.7337620112381,44.6105813572975,45.55486383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| ||
|short_description=p2@FN1 | |short_description=p2@FN1 | ||
}} | }} |
Latest revision as of 02:37, 20 September 2015
Short description: | p2@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -50bp_to_ENST00000480737_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.99e-25 | 76 |
muscle precursor cell | 4.02e-16 | 58 |
myoblast | 4.02e-16 | 58 |
multi-potent skeletal muscle stem cell | 4.02e-16 | 58 |
embryonic cell | 2.34e-15 | 250 |
mesodermal cell | 8.60e-15 | 121 |
muscle cell | 8.82e-15 | 55 |
electrically responsive cell | 2.09e-12 | 61 |
electrically active cell | 2.09e-12 | 61 |
multi fate stem cell | 1.95e-10 | 427 |
smooth muscle cell | 2.07e-10 | 43 |
smooth muscle myoblast | 2.07e-10 | 43 |
skin fibroblast | 2.66e-10 | 23 |
somatic stem cell | 3.60e-10 | 433 |
stem cell | 1.85e-09 | 441 |
extraembryonic cell | 6.16e-09 | 19 |
vascular associated smooth muscle cell | 2.24e-08 | 32 |
preadipocyte | 4.58e-08 | 12 |
cardiocyte | 2.76e-07 | 16 |
stromal cell | 4.88e-07 | 28 |