FFCP PHASE1:Hg19::chr1:205326022..205326074,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:205326022..205326074,- to FFCP PHASE1:Hg19::chr1:205326022..205326074,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYD2 | |UniProt=Q8IYD2 | ||
|association_with_transcript=0bp_to_ENST00000367155,NM_018203,uc001hcf.1,uc010prg.1_5end | |||
|cluster_id=chr1:205326022..205326074,- | |||
|description=CAGE_peak_1_at_KLHDC8A_5end | |||
|id=chr1:205326022..205326074,- | |||
|ontology_enrichment_celltype=CL:0002319!5.95e-09!25;CL:0000133!3.03e-08!59;CL:0000333!1.26e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.85e-09;25!CL:0000047;1.03e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.27e-10,8;CL:0002319,1.72e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.89e-11;82!UBERON:0006215;1.17e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.61e-59!82;UBERON:0000073!4.70e-58!94;UBERON:0001016!4.70e-58!94;UBERON:0005743!1.56e-57!86;UBERON:0001049!1.27e-56!57;UBERON:0005068!1.27e-56!57;UBERON:0006241!1.27e-56!57;UBERON:0007135!1.27e-56!57;UBERON:0000955!1.19e-47!69;UBERON:0006238!1.19e-47!69;UBERON:0002616!1.42e-46!59;UBERON:0002346!1.24e-42!90;UBERON:0002780!4.10e-42!41;UBERON:0001890!4.10e-42!41;UBERON:0006240!4.10e-42!41;UBERON:0003075!4.29e-42!86;UBERON:0007284!4.29e-42!86;UBERON:0003080!7.60e-41!42;UBERON:0007023!2.40e-39!115;UBERON:0000924!9.74e-35!173;UBERON:0006601!9.74e-35!173;UBERON:0002020!1.46e-34!34;UBERON:0003528!1.46e-34!34;UBERON:0001893!1.67e-34!34;UBERON:0004121!7.64e-34!169;UBERON:0002791!2.55e-33!33;UBERON:0001869!8.26e-32!32;UBERON:0003056!1.11e-29!61;UBERON:0000153!2.09e-28!129;UBERON:0007811!2.09e-28!129;UBERON:0000033!3.40e-28!123;UBERON:0000956!1.42e-27!25;UBERON:0000203!1.42e-27!25;UBERON:0002619!7.94e-24!22;UBERON:0001950!7.83e-21!20;UBERON:0003076!2.51e-16!15;UBERON:0003057!2.51e-16!15;UBERON:0000025!1.06e-13!194;UBERON:0004733!3.19e-12!12;UBERON:0002028!3.19e-12!12;UBERON:0007277!3.19e-12!12;UBERON:0004732!4.35e-11!13;UBERON:0004111!3.47e-10!241;UBERON:0001871!1.34e-09!7;UBERON:0002298!1.60e-09!8;UBERON:0000922!1.93e-09!612;UBERON:0001894!6.46e-09!7;UBERON:0006222!6.46e-09!7;UBERON:0002308!1.88e-08!9;UBERON:0000125!1.88e-08!9;UBERON:0001872!3.55e-08!5;UBERON:0002680!4.05e-08!9;UBERON:0001895!4.05e-08!9;UBERON:0010092!4.05e-08!9;UBERON:0003296!5.04e-08!4;UBERON:0010133!5.04e-08!4;UBERON:0002050!1.69e-07!605;UBERON:0005423!1.69e-07!605;UBERON:0000062!2.22e-07!511;UBERON:0000483!2.24e-07!309;UBERON:0000119!3.75e-07!312;UBERON:0000468!4.07e-07!659;UBERON:0000923!4.66e-07!604;UBERON:0005291!4.66e-07!604;UBERON:0006598!4.66e-07!604;UBERON:0002532!4.66e-07!604;UBERON:0000477!4.97e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.87e-31;53!UBERON:0002616;5.87e-31;53!UBERON:0002780;6.90e-30;41!UBERON:0001890;6.90e-30;41!UBERON:0002791;2.50e-24;32!UBERON:0003528;1.70e-23;34!UBERON:0002020;1.70e-23;34!UBERON:0001017;2.95e-23;75!UBERON:0001869;4.36e-23;32!UBERON:0001893;7.48e-23;34!UBERON:0000956;4.32e-22;25!UBERON:0000203;4.32e-22;25!UBERON:0000955;2.35e-21;68!UBERON:0001016;2.29e-20;83!UBERON:0002619;4.22e-19;22!UBERON:0001894;2.71e-15;7!UBERON:0001950;7.65e-15;20!UBERON:0003296;3.57e-13;4!UBERON:0010133;3.57e-13;4!UBERON:0004733;2.29e-11;12!UBERON:0002028;2.29e-11;12!UBERON:0004732;2.06e-10;13!UBERON:0001871;2.51e-10;6!UBERON:0000349;6.39e-10;5!UBERON:0001896;1.62e-09;3!UBERON:0005290;1.62e-09;3!UBERON:0011216;1.93e-08;132!UBERON:0002298;3.32e-08;6!UBERON:0007023;4.96e-08;114!UBERON:0000369;1.33e-07;4!UBERON:0002435;1.33e-07;4!UBERON:0000204;1.33e-07;4!UBERON:0002784;1.72e-07;4!UBERON:0001905;1.89e-07;2!UBERON:0002757;1.89e-07;2!UBERON:0010134;1.89e-07;2!UBERON:0005408;1.89e-07;2!UBERON:0001899;1.89e-07;2!UBERON:0000007;2.15e-07;2!UBERON:0001954;2.43e-07;2!UBERON:0003022;2.43e-07;2!UBERON:0002421;2.43e-07;2!UBERON:0002600;2.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.26e-57,81;UBERON:0001016,3.07e-53,89;UBERON:0001049,5.12e-52,56;UBERON:0005068,5.12e-52,56;UBERON:0006241,5.12e-52,56;UBERON:0007135,5.12e-52,56;UBERON:0000073,1.90e-48,53;UBERON:0002616,1.90e-48,53;UBERON:0000955,1.01e-43,68;UBERON:0006238,1.01e-43,68;UBERON:0002780,7.00e-38,41;UBERON:0001890,7.00e-38,41;UBERON:0003080,7.00e-38,41;UBERON:0006240,7.00e-38,41;UBERON:0003075,4.18e-35,82;UBERON:0007284,4.18e-35,82;UBERON:0002346,4.63e-33,86;UBERON:0004121,3.66e-30,171;UBERON:0000924,3.66e-30,171;UBERON:0006601,3.66e-30,171;UBERON:0010371,1.90e-29,104;UBERON:0003528,7.51e-26,34;UBERON:0002020,7.51e-26,34;UBERON:0001893,8.36e-26,34;UBERON:0003056,1.18e-25,61;UBERON:0002791,1.29e-24,32;UBERON:0001869,1.29e-24,32;UBERON:0007023,6.66e-23,114;UBERON:0011216,1.31e-22,223;UBERON:0000956,8.66e-22,25;UBERON:0000203,8.66e-22,25;UBERON:0010314,3.47e-21,132;UBERON:0002619,7.58e-19,22;UBERON:0001894,3.41e-15,7;UBERON:0006222,3.41e-15,7;UBERON:0003076,8.58e-15,15;UBERON:0003057,8.58e-15,15;UBERON:0001950,1.28e-14,20;UBERON:0003296,3.17e-13,4;UBERON:0010133,3.17e-13,4;UBERON:0004733,1.79e-11,12;UBERON:0002028,1.79e-11,12;UBERON:0007277,1.79e-11,12;UBERON:0000025,7.42e-11,192;UBERON:0004732,1.65e-10,13;UBERON:0001871,3.38e-10,6;UBERON:0000349,4.60e-10,5;UBERON:0001896,1.30e-09,3;UBERON:0005290,1.30e-09,3;UBERON:0010096,1.30e-09,3;UBERON:0004111,2.15e-08,240;UBERON:0002298,2.93e-08,6;UBERON:0000369,9.82e-08,4;UBERON:0002435,9.82e-08,4;UBERON:0000204,9.82e-08,4;UBERON:0010082,9.82e-08,4;UBERON:0001905,1.70e-07,2;UBERON:0002757,1.70e-07,2;UBERON:0010134,1.70e-07,2;UBERON:0005408,1.70e-07,2;UBERON:0001899,1.70e-07,2;UBERON:0002784,1.89e-07,4;UBERON:0000007,2.12e-07,2;UBERON:0001954,2.55e-07,2;UBERON:0003022,2.55e-07,2;UBERON:0002421,2.55e-07,2;UBERON:0002600,2.55e-07,2;UBERON:0002050,6.85e-07,564 | |||
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| ||
|short_description=p1@KLHDC8A | |||
}} | }} |
Latest revision as of 02:49, 20 September 2015
Short description: | p1@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHDC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367155, NM_018203, uc001hcf.1, uc010prg.1_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | Q8IYD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.27e-10 | 8 |
neural cell | 1.72e-09 | 25 |