FFCP PHASE1:Hg19::chr6:122720765..122720831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3298 | |EntrezGene=3298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5225 | |HGNC=5225 | ||
|TSSclassifier=strong | |||
|UniProt=Q03933,Q9BS48 | |UniProt=Q03933,Q9BS48 | ||
|association_with_transcript=69bp_to_ENST00000452194,NM_001135564,NM_001243094,NM_004506,uc003pyt.3,uc003pyu.2,uc003pyv.2_5end | |association_with_transcript=69bp_to_ENST00000452194,NM_001135564,NM_001243094,NM_004506,uc003pyt.3,uc003pyu.2,uc003pyv.2_5end | ||
|cluster_id=chr6:122720765..122720831,+ | |||
|description=CAGE_peak_1_at_HSF2_5end | |description=CAGE_peak_1_at_HSF2_5end | ||
|id=chr6:122720765..122720831,+ | |id=chr6:122720765..122720831,+ | ||
|ontology_enrichment_celltype=CL:0000542!3.12e-13!53;CL:0000051!3.12e-13!53;CL:0000838!7.35e-13!52;CL:0000084!2.04e-09!25;CL:0000827!2.04e-09!25;CL:0000791!2.43e-09!18;CL:0000789!2.43e-09!18;CL:0002420!2.43e-09!18;CL:0002419!2.43e-09!18;CL:0000790!2.43e-09!18;CL:0000625!4.01e-07!11 | |ontology_enrichment_celltype=CL:0000542!3.12e-13!53;CL:0000051!3.12e-13!53;CL:0000838!7.35e-13!52;CL:0000084!2.04e-09!25;CL:0000827!2.04e-09!25;CL:0000791!2.43e-09!18;CL:0000789!2.43e-09!18;CL:0002420!2.43e-09!18;CL:0002419!2.43e-09!18;CL:0000790!2.43e-09!18;CL:0000625!4.01e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.85e-09;25!CL:0000791;2.21e-09;18!CL:0000789;2.21e-09;18!CL:0002419;2.21e-09;18!CL:0000542;3.46e-08;53!CL:0000625;3.87e-07;11 | |ontology_enrichment_celltype_v019=CL:0000084;1.85e-09;25!CL:0000791;2.21e-09;18!CL:0000789;2.21e-09;18!CL:0002419;2.21e-09;18!CL:0000542;3.46e-08;53!CL:0000625;3.87e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.12e-13,53;CL:0000051,3.12e-13,53;CL:0000838,7.35e-13,52;CL:0000084,2.04e-09,25;CL:0000827,2.04e-09,25;CL:0000791,2.43e-09,18;CL:0000789,2.43e-09,18;CL:0002420,2.43e-09,18;CL:0002419,2.43e-09,18;CL:0000790,2.43e-09,18;CL:0000625,4.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.21e-09;18!CL:0000051;3.46e-08;53 | |ontology_enrichment_development_v019=CL:0000790;2.21e-09;18!CL:0000051;3.46e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-13!94;UBERON:0001016!1.33e-13!94;UBERON:0001017!4.82e-13!82;UBERON:0005743!1.87e-12!86;UBERON:0000955!1.47e-10!69;UBERON:0006238!1.47e-10!69;UBERON:0001049!1.60e-10!57;UBERON:0005068!1.60e-10!57;UBERON:0006241!1.60e-10!57;UBERON:0007135!1.60e-10!57;UBERON:0002780!7.18e-10!41;UBERON:0001890!7.18e-10!41;UBERON:0006240!7.18e-10!41;UBERON:0003080!1.15e-09!42;UBERON:0002616!1.95e-09!59;UBERON:0001893!9.30e-09!34;UBERON:0001869!1.51e-08!32;UBERON:0002791!2.63e-08!33;UBERON:0002020!3.36e-08!34;UBERON:0003528!3.36e-08!34;UBERON:0002346!7.70e-08!90;UBERON:0007023!1.05e-07!115;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0003075!3.03e-07!86;UBERON:0007284!3.03e-07!86;UBERON:0002619!9.60e-07!22 | |ontology_enrichment_uberon=UBERON:0000073!1.33e-13!94;UBERON:0001016!1.33e-13!94;UBERON:0001017!4.82e-13!82;UBERON:0005743!1.87e-12!86;UBERON:0000955!1.47e-10!69;UBERON:0006238!1.47e-10!69;UBERON:0001049!1.60e-10!57;UBERON:0005068!1.60e-10!57;UBERON:0006241!1.60e-10!57;UBERON:0007135!1.60e-10!57;UBERON:0002780!7.18e-10!41;UBERON:0001890!7.18e-10!41;UBERON:0006240!7.18e-10!41;UBERON:0003080!1.15e-09!42;UBERON:0002616!1.95e-09!59;UBERON:0001893!9.30e-09!34;UBERON:0001869!1.51e-08!32;UBERON:0002791!2.63e-08!33;UBERON:0002020!3.36e-08!34;UBERON:0003528!3.36e-08!34;UBERON:0002346!7.70e-08!90;UBERON:0007023!1.05e-07!115;UBERON:0000956!2.66e-07!25;UBERON:0000203!2.66e-07!25;UBERON:0003075!3.03e-07!86;UBERON:0007284!3.03e-07!86;UBERON:0002619!9.60e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.95e-08;32!UBERON:0001893;8.52e-08;34!UBERON:0002791;9.82e-08;32!UBERON:0003528;1.23e-07;34!UBERON:0002020;1.23e-07;34!UBERON:0002780;2.19e-07;41!UBERON:0001890;2.19e-07;41!UBERON:0000956;2.43e-07;25!UBERON:0000203;2.43e-07;25!UBERON:0000073;6.94e-07;53!UBERON:0002616;6.94e-07;53!UBERON:0002619;9.15e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001869;4.95e-08;32!UBERON:0001893;8.52e-08;34!UBERON:0002791;9.82e-08;32!UBERON:0003528;1.23e-07;34!UBERON:0002020;1.23e-07;34!UBERON:0002780;2.19e-07;41!UBERON:0001890;2.19e-07;41!UBERON:0000956;2.43e-07;25!UBERON:0000203;2.43e-07;25!UBERON:0000073;6.94e-07;53!UBERON:0002616;6.94e-07;53!UBERON:0002619;9.15e-07;22 | ||
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| ||
|short_description=p1@HSF2 | |short_description=p1@HSF2 | ||
}} | }} |
Latest revision as of 04:33, 20 September 2015
Short description: | p1@HSF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 69bp_to_ENST00000452194, NM_001135564, NM_001243094, NM_004506, uc003pyt.3, uc003pyu.2, uc003pyv.2_5end |
EntrezGene: | HSF2 |
HGNC: | 5225 |
UniProt: | Q03933Q9BS48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.12e-13 | 53 |
common lymphoid progenitor | 3.12e-13 | 53 |
lymphoid lineage restricted progenitor cell | 7.35e-13 | 52 |
T cell | 2.04e-09 | 25 |
pro-T cell | 2.04e-09 | 25 |
mature alpha-beta T cell | 2.43e-09 | 18 |
alpha-beta T cell | 2.43e-09 | 18 |
immature T cell | 2.43e-09 | 18 |
mature T cell | 2.43e-09 | 18 |
immature alpha-beta T cell | 2.43e-09 | 18 |
CD8-positive, alpha-beta T cell | 4.01e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.53e-14 | 89 |
central nervous system | 3.48e-13 | 81 |
brain | 1.08e-10 | 68 |
future brain | 1.08e-10 | 68 |
neural tube | 1.10e-10 | 56 |
neural rod | 1.10e-10 | 56 |
future spinal cord | 1.10e-10 | 56 |
neural keel | 1.10e-10 | 56 |
regional part of nervous system | 1.47e-10 | 53 |
regional part of brain | 1.47e-10 | 53 |
regional part of forebrain | 7.18e-10 | 41 |
forebrain | 7.18e-10 | 41 |
anterior neural tube | 7.18e-10 | 41 |
future forebrain | 7.18e-10 | 41 |
telencephalon | 9.30e-09 | 34 |
cerebral hemisphere | 1.51e-08 | 32 |
brain grey matter | 3.36e-08 | 34 |
gray matter | 3.36e-08 | 34 |
regional part of telencephalon | 3.50e-08 | 32 |
adult organism | 1.51e-07 | 114 |
cerebral cortex | 2.66e-07 | 25 |
pallium | 2.66e-07 | 25 |
neurectoderm | 3.08e-07 | 86 |
regional part of cerebral cortex | 9.60e-07 | 22 |