FFCP PHASE1:Hg19::chr10:98592776..98592796,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:98592776..98592796,+ to FFCP PHASE1:Hg19::chr10:98592776..98592796,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84458 | |EntrezGene=84458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29503 | |HGNC=29503 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JN0 | |UniProt=Q96JN0 | ||
|association_with_transcript=-2bp_to_ENST00000356016,uc001kmu.1_5end | |||
|cluster_id=chr10:98592776..98592796,+ | |||
|description=CAGE_peak_4_at_LCOR_5end | |||
|id=chr10:98592776..98592796,+ | |||
|ontology_enrichment_celltype=CL:0000839!8.52e-20!70;CL:0000557!1.10e-17!71;CL:0000766!7.11e-17!76;CL:0002057!1.94e-16!42;CL:0002194!2.01e-16!63;CL:0000576!2.01e-16!63;CL:0000040!2.01e-16!63;CL:0000559!2.01e-16!63;CL:0002009!4.97e-16!65;CL:0000860!2.04e-15!45;CL:0002031!3.04e-13!124;CL:0000763!5.92e-12!112;CL:0000049!5.92e-12!112;CL:0002087!2.38e-11!119;CL:0000738!3.23e-11!140;CL:0002032!1.25e-09!165;CL:0000837!1.25e-09!165;CL:0000037!2.14e-09!172;CL:0000566!2.14e-09!172;CL:0000988!2.13e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.44e-17;33!CL:0002057;2.44e-17;33!CL:0000473;4.82e-17;39!CL:0000234;4.82e-17;39!CL:0000576;3.92e-11;48!CL:0000766;5.15e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.34e-23,66;CL:0000473,6.33e-23,48;CL:0000234,6.33e-23,48;CL:0000557,1.28e-21,67;CL:0000766,1.21e-20,72;CL:0000860,2.78e-20,42;CL:0002057,2.78e-20,42;CL:0002009,2.82e-18,61;CL:0002194,3.41e-18,59;CL:0000576,3.41e-18,59;CL:0000040,3.41e-18,59;CL:0000559,3.41e-18,59;CL:0000763,5.68e-14,108;CL:0000049,5.68e-14,108;CL:0002031,8.01e-14,120;CL:0000738,1.19e-11,136;CL:0002087,8.66e-10,115;CL:0002032,1.66e-09,161;CL:0000837,1.66e-09,161;CL:0000037,2.06e-09,168;CL:0000988,5.61e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.76e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.24e-16!57;UBERON:0005068!4.24e-16!57;UBERON:0006241!4.24e-16!57;UBERON:0007135!4.24e-16!57;UBERON:0002390!7.35e-16!102;UBERON:0003061!7.35e-16!102;UBERON:0007023!3.33e-15!115;UBERON:0002371!4.03e-15!80;UBERON:0001474!1.07e-13!86;UBERON:0001017!1.68e-13!82;UBERON:0002193!6.39e-13!112;UBERON:0003080!6.71e-13!42;UBERON:0002780!7.59e-13!41;UBERON:0001890!7.59e-13!41;UBERON:0006240!7.59e-13!41;UBERON:0000955!3.61e-12!69;UBERON:0006238!3.61e-12!69;UBERON:0002616!4.58e-12!59;UBERON:0005743!5.45e-12!86;UBERON:0002405!2.19e-11!115;UBERON:0000073!3.34e-11!94;UBERON:0001016!3.34e-11!94;UBERON:0002020!9.37e-11!34;UBERON:0003528!9.37e-11!34;UBERON:0004765!1.02e-10!101;UBERON:0001434!1.02e-10!101;UBERON:0001893!1.54e-10!34;UBERON:0002791!2.58e-10!33;UBERON:0001869!1.09e-09!32;UBERON:0003075!3.54e-08!86;UBERON:0007284!3.54e-08!86;UBERON:0001950!4.88e-08!20;UBERON:0000062!9.76e-08!511;UBERON:0000956!1.68e-07!25;UBERON:0000203!1.68e-07!25;UBERON:0002619!3.60e-07!22;UBERON:0002346!5.19e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.34e-11;41!UBERON:0001890;6.34e-11;41!UBERON:0001950;1.70e-09;20!UBERON:0000073;4.76e-09;53!UBERON:0002616;4.76e-09;53!UBERON:0002791;9.89e-09;32!UBERON:0003528;1.16e-08;34!UBERON:0002020;1.16e-08;34!UBERON:0001893;1.42e-08;34!UBERON:0001869;1.47e-08;32!UBERON:0002619;2.86e-08;22!UBERON:0001016;2.49e-07;83!UBERON:0000956;8.25e-07;25!UBERON:0000203;8.25e-07;25 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,1.34088328328186,0.872338524100369,0,1.26343974685366,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0.85870796139317,0.821246550437305,0.753255837568817,1.29902789771517,1.23150884174919,1.8890587515283,0,0.383829398097213,2.94150634300544,0,0.6024118375565,1.47901604066715,0,0.284338464974843,0,2.21598163412751,3.40925560699241,2.17010870715852,0.223915474239924,0.647787332037959,0.77272670290256,1.59938062657521,0.755751887377619,2.91100873425379,1.16214518452842,1.23350366406548,1.23882548358041,4.60307827715441,3.07392847834921,3.31075121844019,1.72372840368309,1.93645405075148,1.35426486594342,2.07066573496865,2.45615535052061,0.449446968890169,1.22433556948361,2.24650318953266,1.91801137739712,2.96866170168044,4.3882004676759,2.98357325372886,1.16083695451434,1.13477044938228,1.86846674698672,3.01498398308092,5.21482918420201,4.99534342821768,1.81619850790011,0.736555271975129,0.949387162322653,0.845021145247767,1.4882300997553,2.30624510059213,1.57260083605093,0.600707571366025,0.48217676009124,0.855038231223746,0.39783335439818,0.365328307529268,0,0,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0,0,0.587237189370939,0.764546456250458,2.64342657158052,5.60508562981536,0.526768169550154,0.786839080455332,0.786021525498329,0.411202997999018,0.83593247695339,0,0,0,0.222820913770347,0.294605907474837,0.664601683750863,0.541607727530031,0,0.130059347559878,0.164437904603676,0.552700035571697,0.289803085735052,0.741432815810302,0.535081656179426,0,0,0.383220493601921,0,0.759059076058509,0.637130828648193,0.651083453856419,0.950452044448374,0.301150238155546,0.76791966692651,0,0,0,1.41124720257313,0.267440195783507,1.44824403882799,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0,0.665188192387692,0.175669571386252,0.589405839739707,0,0,0.324547393654683,1.39303789839414,2.6591592103773,0.476981248610684,0,1.48583000531826,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0.496971951695318,0.633152558322899,0.662045904066094,0.860509862246441,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,0.134710672069688,0.490385709340376,0,0,0,0.312160076830321,0,0.149448680551801,0.352303495931295,0.485618833104395,0,0.204154171254893,0.122834317311768,0.309977343527296,0,0,0,0,0.336672227908132,0.375355559615893,0.831192346452549,0,0.919463387397059,0,0.453728732640084,0.358779271377724,0,0.847727604638247,0.300091096084402,0.309157587715317,0.772921620136887,0.37223371266318,0.843881661206331,0.584622030967192,0.504867548488229,0.368199594569197,0.323292113637624,0.710019185033229,0.503760491138201,0.339121184620975,1.15956511897978,1.09098448236334,0.860413786167011,0.121973706129595,0.132529768321485,0.116193942869518,0.310983165046111,0.504641701751257,0,0,0,1.38134921352481,0,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,0,1.96565443335525,1.18157981336281,0,0.860919069801795,0.343135620597051,0.548751427043128,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0.144366447761074,0,0,1.58040879591855,0,0.738651018262192,1.17002132569619,1.48631162288728,0,0.503946384596579,0.708875486211932,0.447792613514241,0.871901815541886,0,2.46331618947972,1.23267807618516,2.69526550203004,2.45003920808834,2.27236380167484,0.190493682876507,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0.602878754119172,0,0.899756920638513,1.2162378064119,1.50677127429638,2.10833939483032,0.958499421966331,0,0,0.723906533337896,1.02738161275192,1.07436577943937,0.224170287987055,3.15249216323084,2.58753089831421,2.05348858047597,1.01637849688985,1.30139853857622,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0.828831026872071,0.24538298343828,0,0,1.03985430765404,0.713715955188647,0.157702415033935,0.702848489956279,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0,0,0.620304078368662,1.2942852049117,0.853820462427555,0,0,0,0,0.61384789315225,0,0.256278298511402,0,0.64341568457443,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0.232420756919918,1.32945394550784,0.802025881213139,0.276242966807689,0.459257792658427,0.546273504020151,0.655622074797121,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,1.75407901316748,1.5686127061494,0,0,0,0.515205058238611,0.366277859273374,0.990113999047056,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.214840489736547,0.290033387828457,0.767039646744908,0.178064071293475,0.826424576804891,0.576570202095319,1.53135254993501,0.50578890427775,0.929691098594572,0.94443704049192,0.6970372701606,0,0.532306030317022,1.73986598415015,0.74129687641568,0.715624433709956,0.372158369359667,0.316379424718726,0,0,0,0,0,0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| ||
|short_description=p4@LCOR | |||
}} | }} |
Latest revision as of 06:00, 20 September 2015
Short description: | p4@LCOR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LCOR_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000356016, uc001kmu.1_5end |
EntrezGene: | LCOR |
HGNC: | 29503 |
UniProt: | Q96JN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.34e-23 | 66 |
defensive cell | 6.33e-23 | 48 |
phagocyte | 6.33e-23 | 48 |
granulocyte monocyte progenitor cell | 1.28e-21 | 67 |
myeloid leukocyte | 1.21e-20 | 72 |
classical monocyte | 2.78e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-20 | 42 |
macrophage dendritic cell progenitor | 2.82e-18 | 61 |
monopoietic cell | 3.41e-18 | 59 |
monocyte | 3.41e-18 | 59 |
monoblast | 3.41e-18 | 59 |
promonocyte | 3.41e-18 | 59 |
myeloid cell | 5.68e-14 | 108 |
common myeloid progenitor | 5.68e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 8.01e-14 | 120 |
leukocyte | 1.19e-11 | 136 |
nongranular leukocyte | 8.66e-10 | 115 |
hematopoietic oligopotent progenitor cell | 1.66e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-09 | 161 |
hematopoietic stem cell | 2.06e-09 | 168 |
hematopoietic cell | 5.61e-09 | 177 |