FFCP PHASE1:Hg19::chr2:217236858..217236916,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:217236858..217236916,- to FFCP PHASE1:Hg19::chr2:217236858..217236916,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57574 | |EntrezGene=57574 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29269 | |HGNC=29269 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2E8 | |UniProt=Q9P2E8 | ||
|association_with_transcript=-108bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | |||
|cluster_id=chr2:217236858..217236916,- | |||
|description=CAGE_peak_1_at_MARCH4_5end | |||
|id=chr2:217236858..217236916,- | |||
|ontology_enrichment_celltype=CL:0000055!5.61e-27!180;CL:0000057!7.78e-24!75;CL:0000222!1.80e-20!119;CL:0000220!1.07e-16!246;CL:0002321!1.10e-16!248;CL:0000359!3.67e-15!32;CL:0000192!2.65e-14!42;CL:0000514!2.65e-14!42;CL:0000680!1.83e-11!57;CL:0000056!1.83e-11!57;CL:0000355!1.83e-11!57;CL:0000183!4.58e-11!59;CL:0000187!6.18e-11!54;CL:0002620!5.44e-10!23;CL:0000393!1.34e-09!60;CL:0000211!1.34e-09!60;CL:0000213!6.02e-09!57;CL:0000215!6.02e-09!57;CL:0000144!1.36e-08!625;CL:0000548!2.13e-07!679;CL:0000004!2.13e-07!679;CL:0000255!2.13e-07!679;CL:0000077!2.91e-07!19;CL:0000012!6.03e-07!682;CL:0000076!6.89e-07!62;CL:0002371!7.49e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.41e-15;32!CL:0000057;7.84e-11;73!CL:0002620;4.03e-10;23!CL:0000192;9.68e-10;43!CL:0000077;1.17e-07;19!CL:0002539;1.92e-07;10!CL:1000449;4.11e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.58e-25,76;CL:0000222,5.63e-17,121;CL:0000359,6.76e-16,32;CL:0000192,3.45e-13,43;CL:0000514,3.45e-13,43;CL:0002321,6.50e-12,250;CL:0002620,5.09e-10,23;CL:0000680,3.29e-09,58;CL:0000056,3.29e-09,58;CL:0000355,3.29e-09,58;CL:0000187,1.26e-08,55;CL:0000213,4.83e-08,58;CL:0000215,4.83e-08,58;CL:0000077,8.66e-08,19;CL:0000393,1.59e-07,61;CL:0000211,1.59e-07,61;CL:0002539,2.07e-07,10;CL:1000449,3.20e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;9.68e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.72e-24!312;UBERON:0000483!2.81e-23!309;UBERON:0000475!3.37e-23!365;UBERON:0001637!1.99e-19!42;UBERON:0003509!1.99e-19!42;UBERON:0004572!1.99e-19!42;UBERON:0000055!2.11e-17!69;UBERON:0002049!2.35e-17!79;UBERON:0007798!2.35e-17!79;UBERON:0001981!3.97e-17!60;UBERON:0007500!3.97e-17!60;UBERON:0004537!3.97e-17!60;UBERON:0006965!3.97e-17!60;UBERON:0000025!9.72e-17!194;UBERON:0004111!4.24e-16!241;UBERON:0004573!1.15e-15!33;UBERON:0004571!1.15e-15!33;UBERON:0004872!1.25e-15!84;UBERON:0003914!1.51e-15!118;UBERON:0000914!6.09e-14!83;UBERON:0002329!6.09e-14!83;UBERON:0003077!6.09e-14!83;UBERON:0003059!6.09e-14!83;UBERON:0007282!6.09e-14!83;UBERON:0009618!6.09e-14!83;UBERON:0007285!6.09e-14!83;UBERON:0000486!9.45e-14!82;UBERON:0005256!1.55e-13!143;UBERON:0000477!2.14e-13!286;UBERON:0004290!1.12e-11!70;UBERON:0004535!4.44e-11!110;UBERON:0002100!9.61e-11!216;UBERON:0000467!1.11e-10!625;UBERON:0000480!1.67e-10!626;UBERON:0001009!2.53e-10!113;UBERON:0000468!2.62e-10!659;UBERON:0002097!3.58e-10!40;UBERON:0000481!3.66e-10!347;UBERON:0002199!4.19e-10!45;UBERON:0002416!4.19e-10!45;UBERON:0000947!1.01e-09!21;UBERON:0010191!1.01e-09!21;UBERON:0001134!1.77e-09!61;UBERON:0002036!1.77e-09!61;UBERON:0003082!1.77e-09!61;UBERON:0003102!2.11e-09!95;UBERON:0002385!6.11e-09!63;UBERON:0001015!6.11e-09!63;UBERON:0000383!6.11e-09!63;UBERON:0000064!2.21e-08!219;UBERON:0000490!2.89e-08!138;UBERON:0004121!1.58e-07!169;UBERON:0000033!3.06e-07!123;UBERON:0003056!6.15e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.49e-15;42!UBERON:0003509;6.49e-15;42!UBERON:0004572;6.49e-15;42!UBERON:0004573;3.48e-14;33!UBERON:0004571;3.48e-14;33!UBERON:0003914;1.33e-10;74!UBERON:0007500;2.71e-10;56!UBERON:0001981;2.71e-10;56!UBERON:0004537;2.71e-10;56!UBERON:0000947;9.53e-10;21!UBERON:0010191;9.53e-10;21!UBERON:0002097;9.72e-09;41!UBERON:0000055;4.19e-08;65!UBERON:0004237;1.92e-07;10!UBERON:0004695;1.92e-07;10!UBERON:0002111;1.92e-07;10!UBERON:0004178;1.92e-07;10!UBERON:0002199;2.77e-07;46!UBERON:0002416;2.77e-07;46!UBERON:0003102;3.29e-07;50!UBERON:0006555;4.11e-07;15!UBERON:0004819;4.11e-07;15!UBERON:0001285;4.11e-07;15!UBERON:0007684;4.11e-07;15 | |||
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| ||
|short_description=p1@MARCH4 | |||
}} | }} |
Latest revision as of 06:09, 20 September 2015
Short description: | p1@MARCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MARCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | -108bp_to_ENST00000273067, NM_020814, uc002vgb.2_5end |
EntrezGene: | MARCH4 |
HGNC: | 29269 |
UniProt: | Q9P2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.58e-25 | 76 |
mesodermal cell | 5.63e-17 | 121 |
vascular associated smooth muscle cell | 6.76e-16 | 32 |
smooth muscle cell | 3.45e-13 | 43 |
smooth muscle myoblast | 3.45e-13 | 43 |
embryonic cell | 6.50e-12 | 250 |
skin fibroblast | 5.09e-10 | 23 |
muscle precursor cell | 3.29e-09 | 58 |
myoblast | 3.29e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.29e-09 | 58 |
muscle cell | 1.26e-08 | 55 |
lining cell | 4.83e-08 | 58 |
barrier cell | 4.83e-08 | 58 |
mesothelial cell | 8.66e-08 | 19 |
electrically responsive cell | 1.59e-07 | 61 |
electrically active cell | 1.59e-07 | 61 |
aortic smooth muscle cell | 2.07e-07 | 10 |
epithelial cell of nephron | 3.20e-07 | 15 |