FFCP PHASE1:Hg19::chr12:70093111..70093156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=144453 | |EntrezGene=144453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17105 | |HGNC=17105 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNM2,F8VVX2,F8VR37 | |UniProt=E9PNM2,F8VVX2,F8VR37 | ||
|association_with_transcript=0bp_to_ENST00000331471,ENST00000393365,ENST00000476098,ENST00000533674,ENST00000547208,ENST00000548658_5end | |association_with_transcript=0bp_to_ENST00000331471,ENST00000393365,ENST00000476098,ENST00000533674,ENST00000547208,ENST00000548658_5end | ||
|cluster_id=chr12:70093111..70093156,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_2_at_BEST3_5end | |description=CAGE_peak_2_at_BEST3_5end | ||
|id=chr12:70093111..70093156,- | |id=chr12:70093111..70093156,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;8.23e-08;2!CL:0000242;8.23e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,8.37e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.35e-10;3!UBERON:0006601;1.64e-08;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.90e-51!57;UBERON:0005068!3.90e-51!57;UBERON:0006241!3.90e-51!57;UBERON:0007135!3.90e-51!57;UBERON:0007023!7.69e-44!115;UBERON:0002616!1.28e-41!59;UBERON:0001017!1.91e-41!82;UBERON:0005743!1.94e-40!86;UBERON:0002780!1.31e-37!41;UBERON:0001890!1.31e-37!41;UBERON:0006240!1.31e-37!41;UBERON:0000955!6.10e-37!69;UBERON:0006238!6.10e-37!69;UBERON:0003080!1.76e-36!42;UBERON:0003075!2.19e-35!86;UBERON:0007284!2.19e-35!86;UBERON:0000073!3.70e-35!94;UBERON:0001016!3.70e-35!94;UBERON:0002346!1.25e-34!90;UBERON:0002020!7.26e-29!34;UBERON:0003528!7.26e-29!34;UBERON:0001893!1.30e-28!34;UBERON:0002791!2.47e-27!33;UBERON:0000153!4.43e-27!129;UBERON:0007811!4.43e-27!129;UBERON:0001869!8.33e-26!32;UBERON:0003056!4.80e-25!61;UBERON:0000033!9.46e-24!123;UBERON:0004121!2.18e-22!169;UBERON:0000924!2.29e-22!173;UBERON:0006601!2.29e-22!173;UBERON:0002619!6.03e-20!22;UBERON:0001950!8.43e-20!20;UBERON:0000956!4.03e-19!25;UBERON:0000203!4.03e-19!25;UBERON:0003076!2.42e-15!15;UBERON:0003057!2.42e-15!15;UBERON:0000483!5.81e-14!309;UBERON:0000119!1.23e-13!312;UBERON:0000475!3.60e-13!365;UBERON:0002308!1.73e-11!9;UBERON:0000125!1.73e-11!9;UBERON:0000025!2.98e-11!194;UBERON:0004733!4.06e-11!12;UBERON:0002028!4.06e-11!12;UBERON:0007277!4.06e-11!12;UBERON:0001894!1.02e-10!7;UBERON:0006222!1.02e-10!7;UBERON:0002298!2.29e-10!8;UBERON:0004732!4.25e-10!13;UBERON:0000481!5.35e-10!347;UBERON:0004111!4.21e-09!241;UBERON:0002420!1.30e-08!9;UBERON:0007245!1.30e-08!9;UBERON:0010009!1.30e-08!9;UBERON:0010011!1.30e-08!9;UBERON:0000454!1.30e-08!9;UBERON:0009663!1.77e-08!7;UBERON:0002021!2.58e-08!5;UBERON:0000477!3.62e-08!286;UBERON:0001871!1.33e-07!7;UBERON:0000064!1.55e-07!219;UBERON:0002680!3.64e-07!9;UBERON:0001895!3.64e-07!9;UBERON:0010092!3.64e-07!9;UBERON:0000200!3.79e-07!6 | |ontology_enrichment_uberon=UBERON:0001049!3.90e-51!57;UBERON:0005068!3.90e-51!57;UBERON:0006241!3.90e-51!57;UBERON:0007135!3.90e-51!57;UBERON:0007023!7.69e-44!115;UBERON:0002616!1.28e-41!59;UBERON:0001017!1.91e-41!82;UBERON:0005743!1.94e-40!86;UBERON:0002780!1.31e-37!41;UBERON:0001890!1.31e-37!41;UBERON:0006240!1.31e-37!41;UBERON:0000955!6.10e-37!69;UBERON:0006238!6.10e-37!69;UBERON:0003080!1.76e-36!42;UBERON:0003075!2.19e-35!86;UBERON:0007284!2.19e-35!86;UBERON:0000073!3.70e-35!94;UBERON:0001016!3.70e-35!94;UBERON:0002346!1.25e-34!90;UBERON:0002020!7.26e-29!34;UBERON:0003528!7.26e-29!34;UBERON:0001893!1.30e-28!34;UBERON:0002791!2.47e-27!33;UBERON:0000153!4.43e-27!129;UBERON:0007811!4.43e-27!129;UBERON:0001869!8.33e-26!32;UBERON:0003056!4.80e-25!61;UBERON:0000033!9.46e-24!123;UBERON:0004121!2.18e-22!169;UBERON:0000924!2.29e-22!173;UBERON:0006601!2.29e-22!173;UBERON:0002619!6.03e-20!22;UBERON:0001950!8.43e-20!20;UBERON:0000956!4.03e-19!25;UBERON:0000203!4.03e-19!25;UBERON:0003076!2.42e-15!15;UBERON:0003057!2.42e-15!15;UBERON:0000483!5.81e-14!309;UBERON:0000119!1.23e-13!312;UBERON:0000475!3.60e-13!365;UBERON:0002308!1.73e-11!9;UBERON:0000125!1.73e-11!9;UBERON:0000025!2.98e-11!194;UBERON:0004733!4.06e-11!12;UBERON:0002028!4.06e-11!12;UBERON:0007277!4.06e-11!12;UBERON:0001894!1.02e-10!7;UBERON:0006222!1.02e-10!7;UBERON:0002298!2.29e-10!8;UBERON:0004732!4.25e-10!13;UBERON:0000481!5.35e-10!347;UBERON:0004111!4.21e-09!241;UBERON:0002420!1.30e-08!9;UBERON:0007245!1.30e-08!9;UBERON:0010009!1.30e-08!9;UBERON:0010011!1.30e-08!9;UBERON:0000454!1.30e-08!9;UBERON:0009663!1.77e-08!7;UBERON:0002021!2.58e-08!5;UBERON:0000477!3.62e-08!286;UBERON:0001871!1.33e-07!7;UBERON:0000064!1.55e-07!219;UBERON:0002680!3.64e-07!9;UBERON:0001895!3.64e-07!9;UBERON:0010092!3.64e-07!9;UBERON:0000200!3.79e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.18e-21;53!UBERON:0002616;1.18e-21;53!UBERON:0004733;4.65e-18;12!UBERON:0002028;4.65e-18;12!UBERON:0001950;4.81e-17;20!UBERON:0004732;1.55e-16;13!UBERON:0002298;3.30e-16;6!UBERON:0002619;2.51e-15;22!UBERON:0002780;4.30e-15;41!UBERON:0001890;4.30e-15;41!UBERON:0001017;6.62e-15;75!UBERON:0001893;1.15e-14;34!UBERON:0003528;3.31e-14;34!UBERON:0002020;3.31e-14;34!UBERON:0001016;3.56e-14;83!UBERON:0002791;3.68e-14;32!UBERON:0000956;2.99e-13;25!UBERON:0000203;2.99e-13;25!UBERON:0000955;1.83e-12;68!UBERON:0001869;5.50e-12;32!UBERON:0002680;1.86e-11;9!UBERON:0001895;1.86e-11;9!UBERON:0000988;4.57e-09;3!UBERON:0001896;7.75e-09;3!UBERON:0005290;7.75e-09;3!UBERON:0007023;1.33e-08;114!UBERON:0000125;7.28e-08;9!UBERON:0002308;7.28e-08;9!UBERON:0005090;1.03e-07;2!UBERON:0001630;1.03e-07;2!UBERON:0000341;2.03e-07;2!UBERON:0001875;8.60e-07;2!UBERON:0006514;8.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.11e-37,56;UBERON:0005068,2.11e-37,56;UBERON:0006241,2.11e-37,56;UBERON:0007135,2.11e-37,56;UBERON:0000073,4.04e-34,53;UBERON:0002616,4.04e-34,53;UBERON:0001017,6.43e-33,81;UBERON:0001016,8.48e-29,89;UBERON:0000955,9.49e-29,68;UBERON:0006238,9.49e-29,68;UBERON:0007023,3.66e-25,114;UBERON:0003075,3.53e-23,82;UBERON:0007284,3.53e-23,82;UBERON:0002346,9.43e-22,86;UBERON:0003076,1.99e-21,15;UBERON:0003057,1.99e-21,15;UBERON:0010371,2.20e-21,104;UBERON:0002780,1.53e-19,41;UBERON:0001890,1.53e-19,41;UBERON:0003080,1.53e-19,41;UBERON:0006240,1.53e-19,41;UBERON:0003528,1.92e-19,34;UBERON:0002020,1.92e-19,34;UBERON:0004733,3.82e-18,12;UBERON:0002028,3.82e-18,12;UBERON:0007277,3.82e-18,12;UBERON:0001893,5.90e-17,34;UBERON:0001950,7.14e-17,20;UBERON:0004732,1.29e-16,13;UBERON:0004121,1.91e-16,171;UBERON:0000924,1.91e-16,171;UBERON:0006601,1.91e-16,171;UBERON:0002298,2.20e-16,6;UBERON:0002791,6.58e-16,32;UBERON:0002619,3.58e-15,22;UBERON:0010314,4.81e-15,132;UBERON:0001869,1.06e-13,32;UBERON:0000956,4.07e-13,25;UBERON:0000203,4.07e-13,25;UBERON:0011216,9.32e-13,223;UBERON:0003056,1.00e-11,61;UBERON:0002680,1.60e-11,9;UBERON:0001895,1.60e-11,9;UBERON:0010092,1.60e-11,9;UBERON:0000988,3.15e-09,3;UBERON:0001896,7.44e-09,3;UBERON:0005290,7.44e-09,3;UBERON:0010096,7.44e-09,3;UBERON:0000125,5.20e-08,9;UBERON:0002308,5.20e-08,9;UBERON:0000025,6.99e-08,192;UBERON:0005090,1.05e-07,2;UBERON:0001630,1.05e-07,2;UBERON:0000341,2.10e-07,2;UBERON:0001875,5.93e-07,2;UBERON:0006514,5.93e-07,2;UBERON:0002148,7.76e-07,2;UBERON:0006331,7.76e-07,2;UBERON:0009662,7.76e-07,2 | |||
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| ||
|short_description=p2@BEST3 | |short_description=p2@BEST3 | ||
}} | }} |
Latest revision as of 06:41, 20 September 2015
Short description: | p2@BEST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BEST3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000331471, ENST00000393365, ENST00000476098, ENST00000533674, ENST00000547208, ENST00000548658_5end |
EntrezGene: | BEST3 |
HGNC: | 17105 |
UniProt: | E9PNM2F8VVX2F8VR37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 8.37e-08 | 2 |