FFCP PHASE1:Hg19::chr20:1875110..1875143,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140885 | |EntrezGene=140885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9662 | |HGNC=9662 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000400068_5end | |association_with_transcript=-10bp_to_ENST00000400068_5end | ||
|cluster_id=chr20:1875110..1875143,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_8_at_SIRPA_5end | |description=CAGE_peak_8_at_SIRPA_5end | ||
|id=chr20:1875110..1875143,+ | |id=chr20:1875110..1875143,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.08e-29!76;CL:0002009!2.18e-25!65;CL:0002057!8.61e-25!42;CL:0002194!2.55e-24!63;CL:0000576!2.55e-24!63;CL:0000040!2.55e-24!63;CL:0000559!2.55e-24!63;CL:0000557!3.89e-24!71;CL:0000839!3.40e-22!70;CL:0000860!4.67e-21!45;CL:0000763!7.06e-13!112;CL:0000049!7.06e-13!112 | |ontology_enrichment_celltype=CL:0000766!5.08e-29!76;CL:0002009!2.18e-25!65;CL:0002057!8.61e-25!42;CL:0002194!2.55e-24!63;CL:0000576!2.55e-24!63;CL:0000040!2.55e-24!63;CL:0000559!2.55e-24!63;CL:0000557!3.89e-24!71;CL:0000839!3.40e-22!70;CL:0000860!4.67e-21!45;CL:0000763!7.06e-13!112;CL:0000049!7.06e-13!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-28;33!CL:0002057;1.06e-28;33!CL:0000473;2.32e-28;39!CL:0000234;2.32e-28;39!CL:0000576;7.39e-22;48!CL:0000766;1.62e-18;69!CL:0000094;1.21e-08;8!CL:0000763;4.71e-08;100!CL:0000081;6.71e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.04e-44,72;CL:0002009,4.28e-39,61;CL:0000473,6.81e-39,48;CL:0000234,6.81e-39,48;CL:0002194,1.59e-37,59;CL:0000576,1.59e-37,59;CL:0000040,1.59e-37,59;CL:0000559,1.59e-37,59;CL:0000557,1.90e-37,67;CL:0000839,5.49e-35,66;CL:0000860,9.66e-34,42;CL:0002057,9.66e-34,42;CL:0000763,2.22e-25,108;CL:0000049,2.22e-25,108;CL:0000738,1.12e-16,136;CL:0002087,2.05e-11,115;CL:0002031,4.09e-11,120;CL:0000037,1.43e-09,168;CL:0002032,3.47e-09,161;CL:0000837,3.47e-09,161;CL:0000988,3.68e-09,177;CL:0000094,9.81e-09,8;CL:0000081,5.89e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-24;42!CL:0000049;2.22e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.36e-24!112;UBERON:0002390!3.17e-24!102;UBERON:0003061!3.17e-24!102;UBERON:0002371!6.00e-21!80;UBERON:0003081!8.18e-20!216;UBERON:0002405!9.79e-19!115;UBERON:0001474!1.73e-18!86;UBERON:0004765!3.98e-17!101;UBERON:0001434!3.98e-17!101;UBERON:0000467!9.77e-15!625;UBERON:0000480!1.79e-14!626;UBERON:0007023!2.93e-14!115;UBERON:0002204!4.99e-14!167;UBERON:0000468!2.27e-13!659;UBERON:0002050!2.93e-11!605;UBERON:0005423!2.93e-11!605;UBERON:0000923!3.83e-11!604;UBERON:0005291!3.83e-11!604;UBERON:0006598!3.83e-11!604;UBERON:0002532!3.83e-11!604;UBERON:0000922!1.96e-10!612;UBERON:0000062!1.88e-08!511;UBERON:0000926!1.88e-08!448;UBERON:0004120!1.88e-08!448;UBERON:0006603!1.88e-08!448;UBERON:0000025!4.59e-08!194;UBERON:0004111!1.08e-07!241 | |ontology_enrichment_uberon=UBERON:0002193!1.36e-24!112;UBERON:0002390!3.17e-24!102;UBERON:0003061!3.17e-24!102;UBERON:0002371!6.00e-21!80;UBERON:0003081!8.18e-20!216;UBERON:0002405!9.79e-19!115;UBERON:0001474!1.73e-18!86;UBERON:0004765!3.98e-17!101;UBERON:0001434!3.98e-17!101;UBERON:0000467!9.77e-15!625;UBERON:0000480!1.79e-14!626;UBERON:0007023!2.93e-14!115;UBERON:0002204!4.99e-14!167;UBERON:0000468!2.27e-13!659;UBERON:0002050!2.93e-11!605;UBERON:0005423!2.93e-11!605;UBERON:0000923!3.83e-11!604;UBERON:0005291!3.83e-11!604;UBERON:0006598!3.83e-11!604;UBERON:0002532!3.83e-11!604;UBERON:0000922!1.96e-10!612;UBERON:0000062!1.88e-08!511;UBERON:0000926!1.88e-08!448;UBERON:0004120!1.88e-08!448;UBERON:0006603!1.88e-08!448;UBERON:0000025!4.59e-08!194;UBERON:0004111!1.08e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.37e-07;15!UBERON:0000179;1.37e-07;15!UBERON:0000463;1.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-36,98;UBERON:0003061,1.05e-36,98;UBERON:0002193,1.62e-36,108;UBERON:0002371,1.72e-32,76;UBERON:0002405,1.32e-29,93;UBERON:0001474,2.72e-28,82;UBERON:0004765,2.34e-24,90;UBERON:0001434,1.90e-22,100;UBERON:0003081,4.65e-20,203;UBERON:0002204,1.38e-14,167;UBERON:0007023,1.67e-10,114;UBERON:0000926,7.40e-10,315;UBERON:0004120,7.40e-10,315;UBERON:0006603,7.40e-10,315;UBERON:0000178,1.18e-07,15;UBERON:0000179,1.18e-07,15;UBERON:0000463,1.18e-07,15 | |||
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|phase1_expression=1.63510541343501,1.2846031433459,2.25527046553554,1.0007329835313,0,6.10636966870258,0,0.631719873426831,0.261185628199839,1.22866968250754,0.697801167972428,0.218441372130172,0.263766978228454,0.74259811776028,0.662794751455832,0.672325146451775,0.602694528023977,0,0.487932798790507,0.123121058076788,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,0.502170558379211,0.0764134057479513,0.0821005894499457,0,3.93364276848904,2.68680578668049,8.82451902901633,0.919421224478927,3.0120591877825,0.369754010166788,0,0,0,19.3898392986157,22.0598892217156,14.7567392086779,6.71746422719773,7.12566065241755,9.78787157009909,12.358850296263,13.2256580291083,12.8569552429543,25.5671940596253,16.8578834088949,11.7688420940139,10.0692337312753,10.5025889676931,5.91205574721463,16.5477926753577,11.6187243045089,24.3767675869815,19.5772033124309,9.00590295190891,6.96642801779762,22.9562919278177,13.799948164272,15.983428144976,11.5447955065351,8.7764009353518,4.68847225585964,20.0244374653723,23.8301794370279,19.9303119678584,8.29120595347253,4.17186334736161,5.86409880703815,14.5295880632009,10.6800514436394,22.7852918957437,3.38008458099107,2.97646019951061,3.77385561915077,12.3561494261145,8.40990599912435,6.26829788118613,0.855038231223746,1.19350006319454,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,1.44575660953827,2.50668955317945,3.76600949298142,2.3858578411533,5.35298357332899,0.0945348171640679,0.443458794925128,0.43917392846563,0.916853528483988,1.82147644146271,0,14.2800853208061,14.6268979331384,9.44001519683943,0.476981248610684,0,0,0.596287222100115,0.860234595106124,1.04142150482278,0.56530794192401,0.838998872419812,1.10047216776027,1.04497483268405,0.516833518338658,0,1.00416183829401,2.41697590265488,0.760272105718513,2.19655851793353,0,0.81014194788176,0.267899184852239,0,0.675668882899933,0,0,0.549605231791222,46.1231461026221,62.0448422637321,0.436094052142534,1.49091585508596,0.759783069987479,0.529636723252875,1.43418310374407,1.06400514659507,0.560677600142307,2.1349799145941,1.48000529050296,0.622422070799533,0.942974704487816,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0,0.375355559615893,0,0.438977620880838,0.919463387397059,2.40380894250555,0.340296549480063,0,0.427114777637135,0.423863802319124,0.300091096084402,0.824420233907511,1.28820270022815,1.8611685633159,0.843881661206331,0.584622030967192,0.504867548488229,1.10459878370759,0.323292113637624,1.06502877754984,0.503760491138201,1.18692414617341,1.15956511897978,0.818238361772504,1.14721838155602,0.121973706129595,0.265059536642971,0.116193942869518,0,0,0,0,0,0,1.39310378409594,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0.982827216677626,3.54473944008842,0,0.983907508344908,0,0.439001141634502,0,0.201057944823262,0,0.325808305310325,0,0,0.115930404975077,0.352226082707465,3.89789408954899,5.09284063834272,4.75635380586496,0,0,8.12516120088411,7.48813648445561,7.13429578985896,0,1.00789276919316,0.850650583454319,0.358234090811393,0.871901815541886,0.766765358330422,0,0.528290604079356,2.28060927094849,1.00883967391873,2.65109110195398,0.63497894292169,2.67391897890794,1.17217447210047,0,0.822619941626588,1.8020583470635,2.00078502841405,0.336393253036082,0.87192013766656,0.51336800074665,0.775630294546667,3.57656445851882,0,0,0,0.514414748524284,2.83698264046557,1.3321108950805,0.142977993658148,0,0,0.325736184293735,0,0,1.80863626235752,0,1.29964888536674,8.51366464488333,7.5338563714819,4.21667878966063,0.718874566474748,2.29723871668228,0,1.01346914667305,1.84928690295345,1.07436577943937,0,0.985153801009636,0.215627574859517,0.385029108839245,0.508189248444927,0,0.773288812777695,0.167516265334349,0,29.2112739339401,38.8909896965232,33.1532410748828,0.12269149171914,0,0.271265023699736,1.24782516918484,0.892144943985809,0.630809660135739,1.17141414992713,0.601892199455438,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0.391602314925481,0,3.92859249633486,6.90285442619574,4.802740101155,0,0,0,2.48107807818777,1.84154367945675,3.64858122762996,4.35673107469383,2.55853624533352,4.02134802859019,1.48418066444991,0.154209693802656,0.532685175939381,0.410635780069046,0,0.813472649219715,0.725156697549733,1.60405176242628,0.552485933615378,0.459257792658427,0.546273504020151,0.655622074797121,1.35359883872224,0.616122696835318,2.35304930753057,1.46139224653261,0.633309773357254,2.27466768141793,0.510281115829547,0.647747748306418,3.08454505380579,1.35473218771926,1.00337954770971,2.03901018436031,1.66215201785745,1.56712328305525,0,0,0.256450125116389,0,0.650756789328606,3.81251743096572,0.27470839445503,0,4.01985876597321,1.95018073810956,0,0.096670718292122,0.616194468458578,0.1535036747261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| ||
|short_description=p8@SIRPA | |short_description=p8@SIRPA | ||
}} | }} |
Latest revision as of 07:42, 20 September 2015
Short description: | p8@SIRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SIRPA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -10bp_to_ENST00000400068_5end |
EntrezGene: | SIRPA |
HGNC: | 9662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.04e-44 | 72 |
macrophage dendritic cell progenitor | 4.28e-39 | 61 |
defensive cell | 6.81e-39 | 48 |
phagocyte | 6.81e-39 | 48 |
monopoietic cell | 1.59e-37 | 59 |
monocyte | 1.59e-37 | 59 |
monoblast | 1.59e-37 | 59 |
promonocyte | 1.59e-37 | 59 |
granulocyte monocyte progenitor cell | 1.90e-37 | 67 |
myeloid lineage restricted progenitor cell | 5.49e-35 | 66 |
classical monocyte | 9.66e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.66e-34 | 42 |
myeloid cell | 2.22e-25 | 108 |
common myeloid progenitor | 2.22e-25 | 108 |
leukocyte | 1.12e-16 | 136 |
nongranular leukocyte | 2.05e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 4.09e-11 | 120 |
hematopoietic stem cell | 1.43e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.47e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.47e-09 | 161 |
hematopoietic cell | 3.68e-09 | 177 |
granulocyte | 9.81e-09 | 8 |
blood cell | 5.89e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-36 | 98 |
blood island | 1.05e-36 | 98 |
hemolymphoid system | 1.62e-36 | 108 |
bone marrow | 1.72e-32 | 76 |
immune system | 1.32e-29 | 93 |
bone element | 2.72e-28 | 82 |
skeletal element | 2.34e-24 | 90 |
skeletal system | 1.90e-22 | 100 |
lateral plate mesoderm | 4.65e-20 | 203 |
musculoskeletal system | 1.38e-14 | 167 |
adult organism | 1.67e-10 | 114 |
mesoderm | 7.40e-10 | 315 |
mesoderm-derived structure | 7.40e-10 | 315 |
presumptive mesoderm | 7.40e-10 | 315 |
blood | 1.18e-07 | 15 |
haemolymphatic fluid | 1.18e-07 | 15 |
organism substance | 1.18e-07 | 15 |