FFCP PHASE1:Hg19::chr3:129546740..129546757,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29116 | |||
|TSSclassifier=strong | |||
|UniProt=O94876 | |||
|association_with_transcript=423bp_to_CR749206_5end | |||
|cluster_id=chr3:129546740..129546757,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_13_at_TMCC1_5end | |||
|id=chr3:129546740..129546757,- | |||
|ontology_enrichment_celltype=CL:0000738!3.69e-53!140;CL:0002087!6.56e-50!119;CL:0000766!8.54e-49!76;CL:0002057!4.07e-43!42;CL:0002031!4.66e-43!124;CL:0002194!4.19e-41!63;CL:0000576!4.19e-41!63;CL:0000040!4.19e-41!63;CL:0000559!4.19e-41!63;CL:0002009!2.61e-39!65;CL:0000860!2.99e-39!45;CL:0000037!6.20e-38!172;CL:0000566!6.20e-38!172;CL:0000839!1.05e-36!70;CL:0002032!1.35e-36!165;CL:0000837!1.35e-36!165;CL:0000557!6.06e-36!71;CL:0000988!2.63e-34!182;CL:0000763!1.19e-26!112;CL:0000049!1.19e-26!112;CL:0002393!3.08e-13!9;CL:0002397!3.08e-13!9;CL:0000094!7.52e-13!8;CL:0000134!9.13e-10!358;CL:0000838!2.01e-09!52;CL:0002320!4.06e-09!365;CL:0000542!4.12e-09!53;CL:0000051!4.12e-09!53;CL:0000081!1.03e-08!11;CL:0000791!7.57e-08!18;CL:0000789!7.57e-08!18;CL:0002420!7.57e-08!18;CL:0002419!7.57e-08!18;CL:0000790!7.57e-08!18;CL:0000219!3.05e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000766;4.93e-31;69!CL:0000473;1.93e-29;39!CL:0000234;1.93e-29;39!CL:0000094;2.18e-29;8!CL:0000576;5.64e-27;48!CL:0000860;1.08e-25;33!CL:0002057;1.08e-25;33!CL:0002393;3.09e-21;6!CL:0002397;3.09e-21;6!CL:0000081;5.81e-21;11!CL:0000763;5.36e-13;100!CL:0000775;2.18e-12;3!CL:0002087;3.01e-12;104!CL:0000738;3.24e-12;136!CL:0000767;1.11e-11;3!CL:0000226;6.64e-11;3!CL:0000842;6.64e-11;3!CL:0000875;1.40e-10;3!CL:0002396;1.40e-10;3!CL:0000235;4.12e-10;6!CL:0000771;8.53e-09;2!CL:0000988;1.03e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.70e-64,72;CL:0000473,1.60e-61,48;CL:0000234,1.60e-61,48;CL:0000738,8.00e-56,136;CL:0000860,1.20e-52,42;CL:0002057,1.20e-52,42;CL:0002194,1.35e-47,59;CL:0000576,1.35e-47,59;CL:0000040,1.35e-47,59;CL:0000559,1.35e-47,59;CL:0002009,8.47e-46,61;CL:0002087,5.14e-45,115;CL:0000037,4.14e-43,168;CL:0000839,8.89e-42,66;CL:0000557,4.81e-41,67;CL:0000988,2.34e-40,177;CL:0000763,7.77e-40,108;CL:0000049,7.77e-40,108;CL:0002032,2.85e-39,161;CL:0000837,2.85e-39,161;CL:0002031,5.07e-36,120;CL:0002393,2.28e-30,9;CL:0002397,2.28e-30,9;CL:0000094,2.07e-29,8;CL:0000081,5.60e-21,11;CL:0000134,1.52e-14,354;CL:0002320,4.84e-14,361;CL:0000775,2.19e-12,3;CL:0000219,2.84e-12,386;CL:0000767,1.04e-11,3;CL:0000226,4.42e-11,3;CL:0000842,4.42e-11,3;CL:0000875,1.32e-10,3;CL:0002396,1.32e-10,3;CL:0000034,3.81e-10,441;CL:0000048,4.09e-10,427;CL:0000235,4.88e-10,6;CL:0000723,8.11e-10,433;CL:0000771,8.57e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-37;42!CL:0000049;4.75e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.93e-37!102;UBERON:0003061!7.93e-37!102;UBERON:0002193!4.63e-34!112;UBERON:0002371!2.30e-31!80;UBERON:0001474!4.03e-29!86;UBERON:0004765!2.33e-24!101;UBERON:0001434!2.33e-24!101;UBERON:0002405!3.36e-22!115;UBERON:0002204!3.90e-11!167;UBERON:0003081!4.26e-10!216;UBERON:0002384!3.00e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.47e-10;15!UBERON:0000179;4.47e-10;15!UBERON:0000463;4.47e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.57e-43,98;UBERON:0003061,2.57e-43,98;UBERON:0002193,1.85e-38,108;UBERON:0002371,2.63e-35,76;UBERON:0001474,3.56e-32,82;UBERON:0002405,1.56e-29,93;UBERON:0004765,1.21e-28,90;UBERON:0001434,5.04e-25,100;UBERON:0003081,2.94e-17,203;UBERON:0002384,2.34e-13,371;UBERON:0002204,5.50e-12,167;UBERON:0000178,5.61e-10,15;UBERON:0000179,5.61e-10,15;UBERON:0000463,5.61e-10,15;UBERON:0000926,7.15e-08,315;UBERON:0004120,7.15e-08,315;UBERON:0006603,7.15e-08,315 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0.164201178899891,0,2.75354993794233,3.0706351847777,2.63187409637329,0,0,0,0.154934401160603,0,0,4.43196326825502,4.61252229181326,4.55722828503289,0.895661896959697,0.647787332037959,0.515151135268373,1.30858414901608,0.755751887377619,1.69808842831471,1.85943229524548,1.23350366406548,3.09706370895104,0,0.256160706529101,0.47296445977717,1.03423704220986,1.29096936716765,1.35426486594342,1.88242339542605,0.545812300115692,0.898893937780338,0.612167784741805,1.28371610830437,1.27867425159808,0.329851300186716,0.797854630486527,0.426224750532694,1.7412554317715,0.56738522469114,1.86846674698672,0,0,0.65156653411535,1.81619850790011,1.10483290796269,3.48108626184973,1.69004229049553,1.70083439972035,2.72556239160889,0.561643155732475,1.50176892841506,2.57160938715328,1.42506371870624,1.19350006319454,1.82664153764634,3.51992488922645,0,0,0,0,0,0.661044872784862,0,1.70763890732835,2.34894875748376,0.382273228125229,0,1.68152568894461,0,0,1.17903228824749,0.411202997999018,0.167186495390678,0.32592226663359,0.473447805734733,0,0.222820913770347,0.294605907474837,1.10766947291811,0.541607727530031,0.128091319725675,0.520237390239513,0,0.829050053357545,0,0.14828656316206,0,0,0.113309342697566,1.53288197440768,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,2.41928091869679,1.60464117470104,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.2546003693104,15.511210565933,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21595305478658,0.936017060556951,3.26988557035202,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52482800575339,2.10833939483032,0,0,0,0,0,0.179060963239896,0,1.18218456121156,0.431255149719035,1.54011643535698,0,0,0,0.167516265334349,0,72.6536813228767,17.9496875522415,30.6667479942666,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.6541442089831,2.80428461064202,1.60091336705167,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,0,1.13929437434833,0.238231775457789,0,1.94541993357815,1.08006287447623,0.79312517629427,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0.496166021811951,0,0.487170393523584,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,1.50794029276486,0.230467975111559,0,0,0.0657727735628491,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,10.3469805199535,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p13@TMCC1 | |||
}} |
Latest revision as of 18:22, 24 September 2015
Short description: | p13@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TMCC1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 423bp_to_CR749206_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | O94876 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.57e-43 | 98 |
blood island | 2.57e-43 | 98 |
hemolymphoid system | 1.85e-38 | 108 |
bone marrow | 2.63e-35 | 76 |
bone element | 3.56e-32 | 82 |
immune system | 1.56e-29 | 93 |
skeletal element | 1.21e-28 | 90 |
skeletal system | 5.04e-25 | 100 |
lateral plate mesoderm | 2.94e-17 | 203 |
connective tissue | 2.34e-13 | 371 |
musculoskeletal system | 5.50e-12 | 167 |
blood | 5.61e-10 | 15 |
haemolymphatic fluid | 5.61e-10 | 15 |
organism substance | 5.61e-10 | 15 |
mesoderm | 7.15e-08 | 315 |
mesoderm-derived structure | 7.15e-08 | 315 |
presumptive mesoderm | 7.15e-08 | 315 |