FFCP PHASE1:Hg19::chr5:135382120..135382141,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:135382120..135382141,+ to FFCP PHASE1:Hg19::chr5:135382120..135382141,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7045 | |EntrezGene=7045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11771 | |HGNC=11771 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_uc011cyb.1_5end | |||
|cluster_id=chr5:135382120..135382141,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_4_at_TGFBI_5end | |||
|id=chr5:135382120..135382141,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.50e-28!180;CL:0002371!5.40e-20!591;CL:0000144!2.98e-18!625;CL:0000680!1.22e-17!57;CL:0000056!1.22e-17!57;CL:0000355!1.22e-17!57;CL:0000057!4.28e-16!75;CL:0000187!5.71e-16!54;CL:0000548!6.50e-16!679;CL:0000004!6.50e-16!679;CL:0000255!6.50e-16!679;CL:0000048!6.94e-16!430;CL:0000723!1.34e-15!436;CL:0000183!2.82e-15!59;CL:0000012!4.25e-15!682;CL:0000034!3.48e-14!444;CL:0000192!8.71e-13!42;CL:0000514!8.71e-13!42;CL:0000393!1.04e-12!60;CL:0000211!1.04e-12!60;CL:0000359!5.65e-12!32;CL:0002194!4.34e-08!63;CL:0000576!4.34e-08!63;CL:0000040!4.34e-08!63;CL:0000559!4.34e-08!63;CL:0000003!6.05e-08!722;CL:0002009!6.44e-08!65;CL:0000222!9.11e-08!119;CL:0002334!9.37e-08!12;CL:0002620!1.05e-07!23;CL:0002057!1.36e-07!42;CL:0002320!4.79e-07!365;CL:0000860!7.71e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.58e-11;32!CL:0000187;3.00e-09;55!CL:0000192;3.45e-09;43!CL:0002620;1.09e-08;23!CL:0002334;1.34e-08;12!CL:0000860;2.06e-08;33!CL:0002057;2.06e-08;33!CL:0000473;2.22e-08;39!CL:0000234;2.22e-08;39!CL:0000393;5.32e-07;61!CL:0000211;5.32e-07;61!CL:0000057;5.59e-07;73!CL:0000134;8.00e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.62e-22,427;CL:0000723,1.81e-21,433;CL:0000034,1.38e-19,441;CL:0000680,5.26e-18,58;CL:0000056,5.26e-18,58;CL:0000355,5.26e-18,58;CL:0000057,1.83e-17,76;CL:0000187,3.64e-16,55;CL:0000393,1.27e-12,61;CL:0000211,1.27e-12,61;CL:0000192,1.46e-12,43;CL:0000514,1.46e-12,43;CL:0000359,5.29e-12,32;CL:0002320,2.04e-11,361;CL:0000134,1.13e-10,354;CL:0000219,7.20e-09,386;CL:0000473,7.41e-09,48;CL:0000234,7.41e-09,48;CL:0002334,1.28e-08,12;CL:0002620,1.51e-08,23;CL:0000860,1.27e-07,42;CL:0002057,1.27e-07,42;CL:0002194,1.53e-07,59;CL:0000576,1.53e-07,59;CL:0000040,1.53e-07,59;CL:0000559,1.53e-07,59;CL:0000222,1.75e-07,121;CL:0002009,3.09e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000355;8.80e-10;58!CL:0000514;3.45e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!4.72e-18!167;UBERON:0000486!8.52e-18!82;UBERON:0004290!1.24e-16!70;UBERON:0001134!5.05e-16!61;UBERON:0002036!5.05e-16!61;UBERON:0003082!5.05e-16!61;UBERON:0000914!8.69e-16!83;UBERON:0002329!8.69e-16!83;UBERON:0003077!8.69e-16!83;UBERON:0003059!8.69e-16!83;UBERON:0007282!8.69e-16!83;UBERON:0009618!8.69e-16!83;UBERON:0007285!8.69e-16!83;UBERON:0000926!1.12e-15!448;UBERON:0004120!1.12e-15!448;UBERON:0006603!1.12e-15!448;UBERON:0002385!2.39e-15!63;UBERON:0001015!2.39e-15!63;UBERON:0000383!2.39e-15!63;UBERON:0000468!6.96e-14!659;UBERON:0005256!1.35e-11!143;UBERON:0000467!2.19e-11!625;UBERON:0000480!3.67e-11!626;UBERON:0003081!3.82e-11!216;UBERON:0001637!2.91e-09!42;UBERON:0003509!2.91e-09!42;UBERON:0004572!2.91e-09!42;UBERON:0002100!4.49e-09!216;UBERON:0000490!6.71e-09!138;UBERON:0004872!1.77e-08!84;UBERON:0002050!1.99e-08!605;UBERON:0005423!1.99e-08!605;UBERON:0000923!2.64e-08!604;UBERON:0005291!2.64e-08!604;UBERON:0006598!2.64e-08!604;UBERON:0002532!2.64e-08!604;UBERON:0004573!4.14e-08!33;UBERON:0004571!4.14e-08!33;UBERON:0000922!4.22e-08!612;UBERON:0002199!6.78e-08!45;UBERON:0002416!6.78e-08!45;UBERON:0000479!2.86e-07!787;UBERON:0002097!4.15e-07!40;UBERON:0004535!5.54e-07!110;UBERON:0002384!6.52e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.10e-08;33!UBERON:0004571;1.10e-08;33!UBERON:0002385;1.50e-07;31!UBERON:0001015;1.50e-07;31!UBERON:0000383;1.50e-07;31!UBERON:0001637;3.35e-07;42!UBERON:0003509;3.35e-07;42!UBERON:0004572;3.35e-07;42 | |||
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|phase1_expression=16.5327325136207,65.7288608345318,20.0155253816279,12.0087958023756,37.0977708374649,13.9574163856059,12.6649939084155,3.15859936713415,0,4.42321085702716,3.48900583986214,6.11635841964482,12.6608149549658,0.990130823680373,3.31397375727916,35.6332327619441,21.6970030088632,26.2911632539454,24.8845727383159,9.35720041383588,21.2160718894023,14.7323719094701,1.43117993565528,6.02247470320691,3.38965126905968,0,0,0,0,0.383829398097213,0.77408061658038,2.75826367343678,6.024118375565,4.80680213216824,0,0,0,0,4.8130667392834,1.08505435357926,0.671746422719773,0.647787332037959,1.28787783817093,8.57849608799432,7.17964293008738,8.00527401919793,7.67015821788759,4.11167888021826,7.74265927237759,10.0692337312753,5.63553554364021,3.78371567821736,7.92915065694223,3.22742341791913,1.35426486594342,9.22387463758763,11.7349644524874,4.49446968890169,8.87643287875617,6.73950956859797,12.1474053901818,9.23583640522805,7.57961898962201,6.39337125799041,5.80418477257168,0.56738522469114,4.35975574296902,8.54245461872927,6.25779502104242,4.12658804939722,7.87019353423379,2.20966581592539,2.21523671208619,1.90129757680748,1.91343869968539,1.04829322754188,1.46027220490444,2.55300717830561,3.2145117339416,0.570025487482497,1.19350006319454,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,10.0605128955545,1.40648818027883,18.4333967716129,33.0883021019687,35.6322436643626,21.4727205703797,64.2358028799479,6.71197201864882,22.6163985411815,11.5941917114926,0.130979075497713,2.18577172975525,1.11235332835329,2.92092654289215,4.35324343248168,11.4343846046224,1.90792499444274,1.71598473234038,1.11437250398869,0,0,0,0,0.838998872419812,0,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0,0.976248230192678,0,3.24056779152704,0,0,0.225222960966644,0,0,0,0,0,0.872188104285069,26.3395134398519,11.7766375848059,3.17782033951725,39.8702902840851,9.22137793715728,12.8955848032731,11.7423895302675,34.2867892299852,1.8672662123986,2.96363478553314,2.7788523529288,3.17850598054356,10.37116664064,0.937285727335186,4.37024107562449,1.71141546463335,2.24173020827702,1.17434498643765,2.42809416552197,1.12360645361799,0.204154171254893,1.22834317311768,1.75653827998801,2.37600571456411,4.69807165629258,4.55080680969013,12.2165084108761,0,0.875829639103749,0.277064115484183,1.31693286264251,8.58165828237255,12.9204730659673,2.60894021268048,46.1031363720375,10.4643120521098,11.0204588602972,47.4143931813356,21.7440836693106,42.5106891075288,15.447699075522,34.0928191127358,59.826321168976,39.1272350078377,14.8200336814102,15.0330832841495,115.3781175679,47.1519819705356,4.57813599238317,4.83152132908242,1.63647672354501,1.14721838155602,0.121973706129595,0,0.232387885739037,0.207322110030741,0.252320850875628,0,4.69348596989448,3.21620469096443,2.76269842704961,1.85747171212792,0,0.946454400318751,1.01150814046861,0.482022059766964,1.32352767278873,0.435758888184812,0.237270619111097,1.21348177344148,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,2.057870056657,10.2906097969879,0,0,0,0,0.245976877086227,6.17644117074692,2.85350742062426,2.24803506515239,0.402115889646523,0.740707561268237,0.651616610620649,0,10.1031939417691,0.231860809950154,2.81780866165972,0.288732895522148,0.925971025153221,0,0,0,3.44703808522356,1.17002132569619,7.43155811443641,0,22.0056587940506,3.54437743105966,0,0,1.15014803749563,0,0,0,0,0,0,0,0,1.71072446022705,0.308482478109971,0.600686115687835,0,0.336393253036082,11.7709218584986,1.1734125731352,7.10994436667778,7.15312891703765,11.834238535784,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,2.39779961114489,9.86548156241218,13.5655401347861,10.70212437815,4.88604276440603,9.95097456479128,15.0470855857352,1.50719688529793,3.48613383440118,2.39935178836937,3.64871341923571,7.03159928004977,8.43335757932127,5.03212196532324,17.2292903751171,2.85273810081437,18.0976633334474,35.7528801237667,25.9638396697849,0,0.591092280605782,0,0.128343036279748,0.508189248444927,0,0,0.502548796003046,0,0,0,0,6.87072353627183,9.50323990013386,1.08506009479894,11.4383973841944,11.5978842718155,1.26161932027148,2.81139395982512,3.00946099727719,6.82222512167955,2.0694614258501,6.64225598535437,8.29661258437664,2.25897397617015,2.34961388955289,3.0882908142977,0.82707210449155,2.37285620900479,1.06727557803444,3.03127571446259,1.66435439510497,18.7481981864402,37.2161711728165,18.8758227144317,82.2334076688905,64.0695746278505,11.7692667285342,31.3665146230035,11.8734453155993,17.7341147873054,16.8683639047471,3.28508624055237,35.3093011844862,12.2020897382957,0.604297247958111,18.8476082085088,0.736647911487171,8.95552695683933,8.5582848963157,15.8660542100903,0.902399225814824,1.07821471946181,0,4.38417673959782,4.53872004239366,0,0.340187410553031,1.94324324491925,0,0.270946437543853,1.00337954770971,0,0,1.79099803777743,0,0,0,1.96808787419823,1.30151357865721,1.1334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| ||
|short_description=p4@TGFBI | |||
}} | }} |
Latest revision as of 19:18, 24 September 2015
Short description: | p4@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGFBI_5end |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | 96bp_to_uc011cyb.1_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.62e-22 | 427 |
somatic stem cell | 1.81e-21 | 433 |
stem cell | 1.38e-19 | 441 |
muscle precursor cell | 5.26e-18 | 58 |
myoblast | 5.26e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.26e-18 | 58 |
fibroblast | 1.83e-17 | 76 |
muscle cell | 3.64e-16 | 55 |
electrically responsive cell | 1.27e-12 | 61 |
electrically active cell | 1.27e-12 | 61 |
smooth muscle cell | 1.46e-12 | 43 |
smooth muscle myoblast | 1.46e-12 | 43 |
vascular associated smooth muscle cell | 5.29e-12 | 32 |
connective tissue cell | 2.04e-11 | 361 |
mesenchymal cell | 1.13e-10 | 354 |
motile cell | 7.20e-09 | 386 |
defensive cell | 7.41e-09 | 48 |
phagocyte | 7.41e-09 | 48 |
preadipocyte | 1.28e-08 | 12 |
skin fibroblast | 1.51e-08 | 23 |
classical monocyte | 1.27e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-07 | 42 |
monopoietic cell | 1.53e-07 | 59 |
monocyte | 1.53e-07 | 59 |
monoblast | 1.53e-07 | 59 |
promonocyte | 1.53e-07 | 59 |
mesodermal cell | 1.75e-07 | 121 |
macrophage dendritic cell progenitor | 3.09e-07 | 61 |