FFCP PHASE1:Hg19::chr11:85780086..85780161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8301 | |EntrezGene=8301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15514 | |HGNC=15514 | ||
|TSSclassifier=strong | |||
|UniProt=Q13492,F8VPG7,E9PKP6,Q4LE54 | |UniProt=Q13492,F8VPG7,E9PKP6,Q4LE54 | ||
|association_with_transcript=0bp_to_ENST00000447890,ENST00000526033,ENST00000528256,ENST00000532317,NM_001008660,NM_001206946,NM_007166,uc001pbl.2,uc001pbm.2,uc001pbn.2_5end | |association_with_transcript=0bp_to_ENST00000447890,ENST00000526033,ENST00000528256,ENST00000532317,NM_001008660,NM_001206946,NM_007166,uc001pbl.2,uc001pbm.2,uc001pbn.2_5end | ||
|cluster_id=chr11:85780086..85780161,- | |||
|description=CAGE_peak_1_at_PICALM_5end | |description=CAGE_peak_1_at_PICALM_5end | ||
|id=chr11:85780086..85780161,- | |id=chr11:85780086..85780161,- | ||
|ontology_enrichment_celltype=CL:0000766!1.22e-18!76;CL:0002194!3.66e-17!63;CL:0000576!3.66e-17!63;CL:0000040!3.66e-17!63;CL:0000559!3.66e-17!63;CL:0000839!6.09e-17!70;CL:0002057!4.65e-16!42;CL:0002009!8.86e-16!65;CL:0000860!1.62e-15!45;CL:0000557!3.72e-14!71;CL:0000763!4.27e-09!112;CL:0000049!4.27e-09!112 | |ontology_enrichment_celltype=CL:0000766!1.22e-18!76;CL:0002194!3.66e-17!63;CL:0000576!3.66e-17!63;CL:0000040!3.66e-17!63;CL:0000559!3.66e-17!63;CL:0000839!6.09e-17!70;CL:0002057!4.65e-16!42;CL:0002009!8.86e-16!65;CL:0000860!1.62e-15!45;CL:0000557!3.72e-14!71;CL:0000763!4.27e-09!112;CL:0000049!4.27e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.81e-16;33!CL:0002057;1.81e-16;33!CL:0000473;8.44e-15;39!CL:0000234;8.44e-15;39!CL:0000576;9.83e-10;48!CL:0000766;3.46e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.64e-18,72;CL:0000473,3.54e-17,48;CL:0000234,3.54e-17,48;CL:0002194,4.28e-17,59;CL:0000576,4.28e-17,59;CL:0000040,4.28e-17,59;CL:0000559,4.28e-17,59;CL:0000839,8.16e-17,66;CL:0000860,4.65e-16,42;CL:0002057,4.65e-16,42;CL:0002009,1.17e-15,61;CL:0000557,5.77e-14,67;CL:0000763,8.52e-09,108;CL:0000049,8.52e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.06e-17!115;UBERON:0000467!1.71e-12!625;UBERON:0002390!2.10e-12!102;UBERON:0003061!2.10e-12!102;UBERON:0000480!3.11e-12!626;UBERON:0000468!3.14e-12!659;UBERON:0002204!3.81e-12!167;UBERON:0003081!5.20e-12!216;UBERON:0002193!3.71e-11!112;UBERON:0002371!4.79e-10!80;UBERON:0001474!1.71e-09!86;UBERON:0000479!1.17e-08!787;UBERON:0004765!1.51e-08!101;UBERON:0001434!1.51e-08!101;UBERON:0002050!7.70e-08!605;UBERON:0005423!7.70e-08!605;UBERON:0000923!9.32e-08!604;UBERON:0005291!9.32e-08!604;UBERON:0006598!9.32e-08!604;UBERON:0002532!9.32e-08!604;UBERON:0000062!4.73e-07!511;UBERON:0000922!9.15e-07!612 | |ontology_enrichment_uberon=UBERON:0007023!3.06e-17!115;UBERON:0000467!1.71e-12!625;UBERON:0002390!2.10e-12!102;UBERON:0003061!2.10e-12!102;UBERON:0000480!3.11e-12!626;UBERON:0000468!3.14e-12!659;UBERON:0002204!3.81e-12!167;UBERON:0003081!5.20e-12!216;UBERON:0002193!3.71e-11!112;UBERON:0002371!4.79e-10!80;UBERON:0001474!1.71e-09!86;UBERON:0000479!1.17e-08!787;UBERON:0004765!1.51e-08!101;UBERON:0001434!1.51e-08!101;UBERON:0002050!7.70e-08!605;UBERON:0005423!7.70e-08!605;UBERON:0000923!9.32e-08!604;UBERON:0005291!9.32e-08!604;UBERON:0006598!9.32e-08!604;UBERON:0002532!9.32e-08!604;UBERON:0000062!4.73e-07!511;UBERON:0000922!9.15e-07!612 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.10e-17,114;UBERON:0002390,4.11e-12,98;UBERON:0003061,4.11e-12,98;UBERON:0003081,4.42e-12,203;UBERON:0002204,6.51e-12,167;UBERON:0000926,1.53e-11,315;UBERON:0004120,1.53e-11,315;UBERON:0006603,1.53e-11,315;UBERON:0002193,7.48e-11,108;UBERON:0002371,8.95e-10,76;UBERON:0001474,3.29e-09,82;UBERON:0000479,5.16e-09,773;UBERON:0004765,1.85e-08,90;UBERON:0001434,2.96e-08,100;UBERON:0002405,3.37e-08,93;UBERON:0002050,4.83e-08,564;UBERON:0000923,5.57e-08,560;UBERON:0010316,5.57e-08,560;UBERON:0005291,5.57e-08,560;UBERON:0006598,5.57e-08,560;UBERON:0010317,5.57e-08,560;UBERON:0002532,5.57e-08,560;UBERON:0005423,1.44e-07,581 | |||
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| ||
|short_description=p1@PICALM | |short_description=p1@PICALM | ||
}} | }} |
Latest revision as of 21:46, 24 September 2015
Short description: | p1@PICALM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PICALM_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000447890, ENST00000526033, ENST00000528256, ENST00000532317, NM_001008660, NM_001206946, NM_007166, uc001pbl.2, uc001pbm.2, uc001pbn.2_5end |
EntrezGene: | PICALM |
HGNC: | 15514 |
UniProt: | Q13492F8VPG7E9PKP6Q4LE54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.64e-18 | 72 |
defensive cell | 3.54e-17 | 48 |
phagocyte | 3.54e-17 | 48 |
monopoietic cell | 4.28e-17 | 59 |
monocyte | 4.28e-17 | 59 |
monoblast | 4.28e-17 | 59 |
promonocyte | 4.28e-17 | 59 |
myeloid lineage restricted progenitor cell | 8.16e-17 | 66 |
classical monocyte | 4.65e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-16 | 42 |
macrophage dendritic cell progenitor | 1.17e-15 | 61 |
granulocyte monocyte progenitor cell | 5.77e-14 | 67 |
myeloid cell | 8.52e-09 | 108 |
common myeloid progenitor | 8.52e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.10e-17 | 114 |
hematopoietic system | 4.11e-12 | 98 |
blood island | 4.11e-12 | 98 |
lateral plate mesoderm | 4.42e-12 | 203 |
musculoskeletal system | 6.51e-12 | 167 |
mesoderm | 1.53e-11 | 315 |
mesoderm-derived structure | 1.53e-11 | 315 |
presumptive mesoderm | 1.53e-11 | 315 |
hemolymphoid system | 7.48e-11 | 108 |
bone marrow | 8.95e-10 | 76 |
bone element | 3.29e-09 | 82 |
tissue | 5.16e-09 | 773 |
skeletal element | 1.85e-08 | 90 |
skeletal system | 2.96e-08 | 100 |
immune system | 3.37e-08 | 93 |
embryonic structure | 4.83e-08 | 564 |
germ layer | 5.57e-08 | 560 |
germ layer / neural crest | 5.57e-08 | 560 |
embryonic tissue | 5.57e-08 | 560 |
presumptive structure | 5.57e-08 | 560 |
germ layer / neural crest derived structure | 5.57e-08 | 560 |
epiblast (generic) | 5.57e-08 | 560 |
developing anatomical structure | 1.44e-07 | 581 |