FFCP PHASE1:Hg19::chr19:7812475..7812509,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30835 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1641 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NNX6,G5E9C4,F5H0Y7,B2R907,B4E2A8 | |||
|association_with_transcript=-11bp_to_ENST00000204801,ENST00000301357,ENST00000315591,ENST00000315599,ENST00000354397,ENST00000394161,ENST00000394173,ENST00000540789,NM_001144893,NM_001144894,NM_001144895,NM_001144896,NM_001144897,NM_001144899,NM_021155,NR_026692,uc002mhq.2,uc002mhr. | |||
|cluster_id=chr19:7812475..7812509,- | |||
|coexpression_cluster_id=C1560 | |||
|description=CAGE_peak_1_at_CD209_5end | |||
|id=chr19:7812475..7812509,- | |||
|ontology_enrichment_celltype=CL:0002194!5.69e-32!63;CL:0000576!5.69e-32!63;CL:0000040!5.69e-32!63;CL:0000559!5.69e-32!63;CL:0002009!1.51e-30!65;CL:0000839!2.36e-27!70;CL:0000766!8.65e-27!76;CL:0000557!9.04e-27!71;CL:0002057!2.10e-18!42;CL:0000860!1.36e-16!45;CL:0000763!1.11e-14!112;CL:0000049!1.11e-14!112;CL:0002087!1.62e-13!119;CL:0000738!1.66e-11!140;CL:0002031!2.12e-10!124;CL:0000037!1.43e-07!172;CL:0000566!1.43e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.37e-27;6!CL:0002619;4.04e-15;3!CL:0000840;9.23e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.51e-27,6;CL:0002194,3.37e-18,59;CL:0000576,3.37e-18,59;CL:0000040,3.37e-18,59;CL:0000559,3.37e-18,59;CL:0002009,1.76e-17,61;CL:0000839,7.10e-16,66;CL:0000557,1.39e-15,67;CL:0002619,4.06e-15,3;CL:0000766,3.06e-14,72;CL:0000763,2.09e-09,108;CL:0000049,2.09e-09,108;CL:0000840,9.25e-08,5;CL:0001029,9.25e-08,5;CL:0002087,1.54e-07,115;CL:0002031,4.47e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.89e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.12e-36!115;UBERON:0002390!1.48e-23!102;UBERON:0003061!1.48e-23!102;UBERON:0002371!3.41e-22!80;UBERON:0002193!3.50e-22!112;UBERON:0001474!1.07e-19!86;UBERON:0002405!1.22e-18!115;UBERON:0004765!1.21e-15!101;UBERON:0001434!1.21e-15!101;UBERON:0003081!1.70e-11!216;UBERON:0000062!9.68e-11!511;UBERON:0000468!2.15e-09!659;UBERON:0002204!4.55e-09!167;UBERON:0000467!1.10e-08!625;UBERON:0000480!1.29e-08!626;UBERON:0000922!1.79e-08!612;UBERON:0002050!1.05e-07!605;UBERON:0005423!1.05e-07!605;UBERON:0000923!2.34e-07!604;UBERON:0005291!2.34e-07!604;UBERON:0006598!2.34e-07!604;UBERON:0002532!2.34e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.70e-13,76;UBERON:0007023,5.37e-13,114;UBERON:0001474,4.76e-12,82;UBERON:0002405,1.31e-11,93;UBERON:0004765,1.20e-10,90;UBERON:0003081,8.57e-10,203;UBERON:0002390,1.78e-09,98;UBERON:0003061,1.78e-09,98;UBERON:0002193,1.90e-09,108;UBERON:0001434,3.26e-09,100;UBERON:0000926,2.69e-07,315;UBERON:0004120,2.69e-07,315;UBERON:0006603,2.69e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,49.4853198070233,16.518576966968,36.3181550364203,0.872389432677388,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.575384784644301,0.768482119587302,0,0,1.29096936716765,0,0.941211697713023,0.545812300115692,0.224723484445085,0.306083892370903,0.641858054152187,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0,0,0,0,0.217188844705117,0.605399502633369,0,0.632924774881769,0.845021145247767,0.212604299965044,0.838634582033504,0.673971786878971,0.901061357049038,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,38.6211398449073,34.3035582479556,33.6383640112729,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0838706696137,4.21207677250628,11.7418618208095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,9.5428847372104,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54911749049875,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84344458585075,3.13146551049382,2.33588798396672,0,0,0,0,0,0,0,3.51619630252546,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0,0,0,0,0,0,0,1.53471711068062,1.1837208676432,0,0,0,0.185536196323703,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0.219385397153973,0,0,1.00035336054936,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12298154808014,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0,0,0,11.3735843331278,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,0.872901148395775,0,0.677942222341597,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,1.11712960508902,0.687481272035051,0.717873024576814,0.399358000997982,0.429226048136571,2.00854311697685,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.367182116944987,0,0,0,1.42939065274673,1.98627591109629,0,0,0,0,0,0,0,0,1.02586563574658,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0.828478110694391,2.48083010905975,0,0,0,0,0,0.919036730290385,0.327872630709804,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,1.68534503309014,0,0,0.40781839786099,0.0657727735628491,0,0,0.863424021355654,0.157115589916002,0,0.913158720509496,1.51149313853035,0,1.1436247068265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.923965261706223,2.3196288626764,0.971421986118279,0,0,0,0,0,0,0.771741581079447,0.655678681511872,0,0.735444965261716,0,0,0,0.4226557275834,0,0,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0,0.829169439458779,0,1.49263787330687,0,0.193766729508018,0.682821857254437,0.112131862580613,0.636471582781649,0.808468755832877,0.435433495793923,0,0.134704106029175,1.2192774916755,0.99798106963804,0,0,0,0,2.34640942403454,0.488965776731466,0.406896178315738,0,1.81146414231924,0 | |||
|short_description=p1@CD209 | |||
}} |
Latest revision as of 21:58, 24 September 2015
Short description: | p1@CD209 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD209_5end |
Coexpression cluster: | C1560_CD14_Dendritic_Macrophage_dura_Monocytederived_lymph_left |
Association with transcript: | -11bp_to_ENST00000204801, ENST00000301357, ENST00000315591, ENST00000315599, ENST00000354397, ENST00000394161, ENST00000394173, ENST00000540789, NM_001144893, NM_001144894, NM_001144895, NM_001144896, NM_001144897, NM_001144899, NM_021155, NR_026692, uc002mhq.2, uc002mhr. |
EntrezGene: | CD209 |
HGNC: | 1641 |
UniProt: | Q9NNX6G5E9C4F5H0Y7B2R907B4E2A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.51e-27 | 6 |
monopoietic cell | 3.37e-18 | 59 |
monocyte | 3.37e-18 | 59 |
monoblast | 3.37e-18 | 59 |
promonocyte | 3.37e-18 | 59 |
macrophage dendritic cell progenitor | 1.76e-17 | 61 |
myeloid lineage restricted progenitor cell | 7.10e-16 | 66 |
granulocyte monocyte progenitor cell | 1.39e-15 | 67 |
adult endothelial progenitor cell | 4.06e-15 | 3 |
myeloid leukocyte | 3.06e-14 | 72 |
myeloid cell | 2.09e-09 | 108 |
common myeloid progenitor | 2.09e-09 | 108 |
immature conventional dendritic cell | 9.25e-08 | 5 |
common dendritic progenitor | 9.25e-08 | 5 |
nongranular leukocyte | 1.54e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 4.47e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.70e-13 | 76 |
adult organism | 5.37e-13 | 114 |
bone element | 4.76e-12 | 82 |
immune system | 1.31e-11 | 93 |
skeletal element | 1.20e-10 | 90 |
lateral plate mesoderm | 8.57e-10 | 203 |
hematopoietic system | 1.78e-09 | 98 |
blood island | 1.78e-09 | 98 |
hemolymphoid system | 1.90e-09 | 108 |
skeletal system | 3.26e-09 | 100 |
mesoderm | 2.69e-07 | 315 |
mesoderm-derived structure | 2.69e-07 | 315 |
presumptive mesoderm | 2.69e-07 | 315 |