FFCP PHASE1:Hg19::chr8:103136481..103136506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83988 | |EntrezGene=83988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7655 | |HGNC=7655 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHE8,E5RJT1,E5RI95 | |UniProt=E5RHE8,E5RJT1,E5RI95 | ||
|association_with_transcript=0bp_to_ENST00000517639,ENST00000517822,ENST00000518952,ENST00000523923,ENST00000524209_5end | |association_with_transcript=0bp_to_ENST00000517639,ENST00000517822,ENST00000518952,ENST00000523923,ENST00000524209_5end | ||
|cluster_id=chr8:103136481..103136506,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_2_at_NCALD_5end | |description=CAGE_peak_2_at_NCALD_5end | ||
|id=chr8:103136481..103136506,- | |id=chr8:103136481..103136506,- | ||
|ontology_enrichment_celltype=CL:0000791!8.32e-09!18;CL:0000789!8.32e-09!18;CL:0002420!8.32e-09!18;CL:0002419!8.32e-09!18;CL:0000790!8.32e-09!18;CL:0000084!2.40e-07!25;CL:0000827!2.40e-07!25;CL:0000625!4.23e-07!11 | |ontology_enrichment_celltype=CL:0000791!8.32e-09!18;CL:0000789!8.32e-09!18;CL:0002420!8.32e-09!18;CL:0002419!8.32e-09!18;CL:0000790!8.32e-09!18;CL:0000084!2.40e-07!25;CL:0000827!2.40e-07!25;CL:0000625!4.23e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-09;18!CL:0000789;1.63e-09;18!CL:0002419;1.63e-09;18!CL:0000625;5.95e-09;11!CL:0000084;2.13e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.25e-09,18;CL:0000789,1.25e-09,18;CL:0002420,1.25e-09,18;CL:0002419,1.25e-09,18;CL:0000790,1.25e-09,18;CL:0000625,4.75e-09,11;CL:0000084,1.40e-08,25;CL:0000827,1.40e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-27!115;UBERON:0001869!1.67e-16!32;UBERON:0001893!2.01e-16!34;UBERON:0002619!2.92e-16!22;UBERON:0002780!3.11e-16!41;UBERON:0001890!3.11e-16!41;UBERON:0006240!3.11e-16!41;UBERON:0002791!9.79e-16!33;UBERON:0001950!1.02e-15!20;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0003080!2.35e-15!42;UBERON:0000956!6.35e-15!25;UBERON:0000203!6.35e-15!25;UBERON:0001049!1.49e-13!57;UBERON:0005068!1.49e-13!57;UBERON:0006241!1.49e-13!57;UBERON:0007135!1.49e-13!57;UBERON:0001017!2.46e-12!82;UBERON:0002616!1.15e-11!59;UBERON:0005743!2.45e-11!86;UBERON:0000955!4.86e-10!69;UBERON:0006238!4.86e-10!69;UBERON:0000073!3.80e-09!94;UBERON:0001016!3.80e-09!94;UBERON:0003075!1.10e-07!86;UBERON:0007284!1.10e-07!86;UBERON:0003056!1.67e-07!61;UBERON:0000153!9.17e-07!129;UBERON:0007811!9.17e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!2.08e-27!115;UBERON:0001869!1.67e-16!32;UBERON:0001893!2.01e-16!34;UBERON:0002619!2.92e-16!22;UBERON:0002780!3.11e-16!41;UBERON:0001890!3.11e-16!41;UBERON:0006240!3.11e-16!41;UBERON:0002791!9.79e-16!33;UBERON:0001950!1.02e-15!20;UBERON:0002020!1.45e-15!34;UBERON:0003528!1.45e-15!34;UBERON:0003080!2.35e-15!42;UBERON:0000956!6.35e-15!25;UBERON:0000203!6.35e-15!25;UBERON:0001049!1.49e-13!57;UBERON:0005068!1.49e-13!57;UBERON:0006241!1.49e-13!57;UBERON:0007135!1.49e-13!57;UBERON:0001017!2.46e-12!82;UBERON:0002616!1.15e-11!59;UBERON:0005743!2.45e-11!86;UBERON:0000955!4.86e-10!69;UBERON:0006238!4.86e-10!69;UBERON:0000073!3.80e-09!94;UBERON:0001016!3.80e-09!94;UBERON:0003075!1.10e-07!86;UBERON:0007284!1.10e-07!86;UBERON:0003056!1.67e-07!61;UBERON:0000153!9.17e-07!129;UBERON:0007811!9.17e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.49e-21;22!UBERON:0001950;9.17e-21;20!UBERON:0000956;7.86e-18;25!UBERON:0000203;7.86e-18;25!UBERON:0001869;1.81e-17;32!UBERON:0001893;2.60e-16;34!UBERON:0002791;1.18e-15;32!UBERON:0003528;7.01e-15;34!UBERON:0002020;7.01e-15;34!UBERON:0002780;1.32e-13;41!UBERON:0001890;1.32e-13;41!UBERON:0000073;4.63e-08;53!UBERON:0002616;4.63e-08;53!UBERON:0001871;1.22e-07;6!UBERON:0000200;3.95e-07;6 | |||
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| ||
|short_description=p2@NCALD | |short_description=p2@NCALD | ||
}} | }} |
Latest revision as of 22:01, 24 September 2015
Short description: | p2@NCALD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NCALD_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000517639, ENST00000517822, ENST00000518952, ENST00000523923, ENST00000524209_5end |
EntrezGene: | NCALD |
HGNC: | 7655 |
UniProt: | E5RHE8E5RJT1E5RI95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.25e-09 | 18 |
alpha-beta T cell | 1.25e-09 | 18 |
immature T cell | 1.25e-09 | 18 |
mature T cell | 1.25e-09 | 18 |
immature alpha-beta T cell | 1.25e-09 | 18 |
CD8-positive, alpha-beta T cell | 4.75e-09 | 11 |
T cell | 1.40e-08 | 25 |
pro-T cell | 1.40e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.63e-24 | 114 |
regional part of cerebral cortex | 2.02e-21 | 22 |
neocortex | 1.11e-20 | 20 |
cerebral hemisphere | 5.40e-19 | 32 |
telencephalon | 1.66e-18 | 34 |
regional part of forebrain | 1.01e-17 | 41 |
forebrain | 1.01e-17 | 41 |
anterior neural tube | 1.01e-17 | 41 |
future forebrain | 1.01e-17 | 41 |
cerebral cortex | 1.02e-17 | 25 |
pallium | 1.02e-17 | 25 |
regional part of telencephalon | 3.56e-17 | 32 |
brain grey matter | 1.34e-16 | 34 |
gray matter | 1.34e-16 | 34 |
neural tube | 1.02e-13 | 56 |
neural rod | 1.02e-13 | 56 |
future spinal cord | 1.02e-13 | 56 |
neural keel | 1.02e-13 | 56 |
regional part of nervous system | 2.54e-13 | 53 |
regional part of brain | 2.54e-13 | 53 |
central nervous system | 9.63e-12 | 81 |
brain | 5.27e-10 | 68 |
future brain | 5.27e-10 | 68 |
nervous system | 1.27e-09 | 89 |
pre-chordal neural plate | 8.88e-09 | 61 |
neural plate | 4.33e-08 | 82 |
presumptive neural plate | 4.33e-08 | 82 |
temporal lobe | 1.29e-07 | 6 |
neurectoderm | 3.84e-07 | 86 |
gyrus | 4.00e-07 | 6 |