FFCP PHASE1:Hg19::chr18:9708229..9708326,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11031 | |EntrezGene=11031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9771 | |HGNC=9771 | ||
|TSSclassifier=strong | |||
|UniProt=Q13636 | |UniProt=Q13636 | ||
|association_with_transcript=1bp_to_ENST00000306096,NM_006868,uc002kog.2_5end | |association_with_transcript=1bp_to_ENST00000306096,NM_006868,uc002kog.2_5end | ||
|cluster_id=chr18:9708229..9708326,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_RAB31_5end | |description=CAGE_peak_1_at_RAB31_5end | ||
|id=chr18:9708229..9708326,+ | |id=chr18:9708229..9708326,+ | ||
|ontology_enrichment_celltype=CL:0002009!5.31e-33!65;CL:0002194!2.95e-32!63;CL:0000576!2.95e-32!63;CL:0000040!2.95e-32!63;CL:0000559!2.95e-32!63;CL:0000766!1.72e-31!76;CL:0000557!1.34e-27!71;CL:0000860!4.76e-27!45;CL:0002057!6.80e-26!42;CL:0000839!2.72e-24!70;CL:0000763!1.66e-18!112;CL:0000049!1.66e-18!112;CL:0000048!5.81e-07!430 | |ontology_enrichment_celltype=CL:0002009!5.31e-33!65;CL:0002194!2.95e-32!63;CL:0000576!2.95e-32!63;CL:0000040!2.95e-32!63;CL:0000559!2.95e-32!63;CL:0000766!1.72e-31!76;CL:0000557!1.34e-27!71;CL:0000860!4.76e-27!45;CL:0002057!6.80e-26!42;CL:0000839!2.72e-24!70;CL:0000763!1.66e-18!112;CL:0000049!1.66e-18!112;CL:0000048!5.81e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.99e-20;33!CL:0002057;5.99e-20;33!CL:0000473;1.38e-19;39!CL:0000234;1.38e-19;39!CL:0000576;2.06e-17;48!CL:0000766;2.20e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.88e-32,61;CL:0002194,1.02e-31,59;CL:0000576,1.02e-31,59;CL:0000040,1.02e-31,59;CL:0000559,1.02e-31,59;CL:0000766,1.04e-30,72;CL:0000473,2.56e-29,48;CL:0000234,2.56e-29,48;CL:0000557,8.23e-27,67;CL:0000860,6.58e-26,42;CL:0002057,6.58e-26,42;CL:0000839,2.10e-23,66;CL:0000763,1.46e-17,108;CL:0000049,1.46e-17,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.83e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.25e-23!80;UBERON:0004765!2.88e-23!101;UBERON:0001434!2.88e-23!101;UBERON:0002390!4.01e-22!102;UBERON:0003061!4.01e-22!102;UBERON:0001474!1.33e-21!86;UBERON:0002204!3.09e-21!167;UBERON:0002193!1.47e-19!112;UBERON:0000468!8.33e-16!659;UBERON:0000467!3.15e-15!625;UBERON:0000480!4.00e-15!626;UBERON:0002050!4.06e-15!605;UBERON:0005423!4.06e-15!605;UBERON:0003081!5.83e-15!216;UBERON:0000923!6.28e-15!604;UBERON:0005291!6.28e-15!604;UBERON:0006598!6.28e-15!604;UBERON:0002532!6.28e-15!604;UBERON:0000922!6.27e-14!612;UBERON:0002405!2.06e-12!115;UBERON:0000062!9.45e-12!511;UBERON:0000479!1.77e-11!787;UBERON:0000926!5.13e-10!448;UBERON:0004120!5.13e-10!448;UBERON:0006603!5.13e-10!448;UBERON:0007023!4.73e-09!115;UBERON:0002616!8.80e-09!59;UBERON:0001049!1.70e-08!57;UBERON:0005068!1.70e-08!57;UBERON:0006241!1.70e-08!57;UBERON:0007135!1.70e-08!57;UBERON:0001017!9.56e-08!82;UBERON:0002020!3.83e-07!34;UBERON:0003528!3.83e-07!34;UBERON:0000955!4.90e-07!69;UBERON:0006238!4.90e-07!69;UBERON:0005743!5.92e-07!86;UBERON:0001893!7.72e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-22,76;UBERON:0001434,3.40e-22,100;UBERON:0004765,5.49e-22,90;UBERON:0002390,2.83e-21,98;UBERON:0003061,2.83e-21,98;UBERON:0001474,1.00e-20,82;UBERON:0002204,1.62e-20,167;UBERON:0002193,1.02e-18,108;UBERON:0000926,5.33e-17,315;UBERON:0004120,5.33e-17,315;UBERON:0006603,5.33e-17,315;UBERON:0002405,2.09e-16,93;UBERON:0003081,2.74e-16,203;UBERON:0002050,1.52e-15,564;UBERON:0000923,2.05e-14,560;UBERON:0010316,2.05e-14,560;UBERON:0005291,2.05e-14,560;UBERON:0006598,2.05e-14,560;UBERON:0010317,2.05e-14,560;UBERON:0002532,2.05e-14,560;UBERON:0005423,1.81e-12,581;UBERON:0000922,3.81e-12,592;UBERON:0007023,8.80e-09,114;UBERON:0001049,1.09e-08,56;UBERON:0005068,1.09e-08,56;UBERON:0006241,1.09e-08,56;UBERON:0007135,1.09e-08,56;UBERON:0010314,1.28e-08,132;UBERON:0001017,6.80e-08,81;UBERON:0000073,1.16e-07,53;UBERON:0002616,1.16e-07,53;UBERON:0000479,2.32e-07,773;UBERON:0000955,3.44e-07,68;UBERON:0006238,3.44e-07,68;UBERON:0003528,3.80e-07,34;UBERON:0002020,3.80e-07,34;UBERON:0001893,7.66e-07,34 | |||
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| ||
|short_description=p1@RAB31 | |short_description=p1@RAB31 | ||
}} | }} |
Latest revision as of 22:23, 24 September 2015
Short description: | p1@RAB31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAB31_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 1bp_to_ENST00000306096, NM_006868, uc002kog.2_5end |
EntrezGene: | RAB31 |
HGNC: | 9771 |
UniProt: | Q13636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.88e-32 | 61 |
monopoietic cell | 1.02e-31 | 59 |
monocyte | 1.02e-31 | 59 |
monoblast | 1.02e-31 | 59 |
promonocyte | 1.02e-31 | 59 |
myeloid leukocyte | 1.04e-30 | 72 |
defensive cell | 2.56e-29 | 48 |
phagocyte | 2.56e-29 | 48 |
granulocyte monocyte progenitor cell | 8.23e-27 | 67 |
classical monocyte | 6.58e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.58e-26 | 42 |
myeloid lineage restricted progenitor cell | 2.10e-23 | 66 |
myeloid cell | 1.46e-17 | 108 |
common myeloid progenitor | 1.46e-17 | 108 |