FFCP PHASE1:Hg19::chr22:43411106..43411165,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11252 | |EntrezGene=11252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8571 | |HGNC=8571 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNF0,B0QYG8 | |UniProt=Q9UNF0,B0QYG8 | ||
|association_with_transcript=0bp_to_ENST00000263246,ENST00000337959,ENST00000453643,uc003bdg.3_5end | |association_with_transcript=0bp_to_ENST00000263246,ENST00000337959,ENST00000453643,uc003bdg.3_5end | ||
|cluster_id=chr22:43411106..43411165,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_PACSIN2_5end | |description=CAGE_peak_1_at_PACSIN2_5end | ||
|id=chr22:43411106..43411165,- | |id=chr22:43411106..43411165,- | ||
|ontology_enrichment_celltype=CL:0000766!4.51e-19!76;CL:0000557!3.27e-18!71;CL:0002057!1.69e-16!42;CL:0002009!3.62e-16!65;CL:0002194!3.50e-15!63;CL:0000576!3.50e-15!63;CL:0000040!3.50e-15!63;CL:0000559!3.50e-15!63;CL:0000839!7.98e-15!70;CL:0000860!3.11e-14!45;CL:0000763!4.37e-13!112;CL:0000049!4.37e-13!112 | |ontology_enrichment_celltype=CL:0000766!4.51e-19!76;CL:0000557!3.27e-18!71;CL:0002057!1.69e-16!42;CL:0002009!3.62e-16!65;CL:0002194!3.50e-15!63;CL:0000576!3.50e-15!63;CL:0000040!3.50e-15!63;CL:0000559!3.50e-15!63;CL:0000839!7.98e-15!70;CL:0000860!3.11e-14!45;CL:0000763!4.37e-13!112;CL:0000049!4.37e-13!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.77e-14;33!CL:0002057;6.77e-14;33!CL:0000473;9.21e-14;39!CL:0000234;9.21e-14;39!CL:0000576;5.30e-10;48!CL:0000766;8.13e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.92e-21,72;CL:0000557,1.94e-20,67;CL:0000473,6.44e-19,48;CL:0000234,6.44e-19,48;CL:0002009,2.41e-18,61;CL:0002194,2.63e-17,59;CL:0000576,2.63e-17,59;CL:0000040,2.63e-17,59;CL:0000559,2.63e-17,59;CL:0000839,9.47e-17,66;CL:0000860,1.69e-16,42;CL:0002057,1.69e-16,42;CL:0000763,2.42e-14,108;CL:0000049,2.42e-14,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.44e-24!216;UBERON:0002390!6.57e-17!102;UBERON:0003061!6.57e-17!102;UBERON:0002193!4.46e-16!112;UBERON:0001474!7.26e-15!86;UBERON:0002371!3.79e-14!80;UBERON:0002405!6.65e-14!115;UBERON:0000926!2.92e-12!448;UBERON:0004120!2.92e-12!448;UBERON:0006603!2.92e-12!448;UBERON:0004765!9.82e-11!101;UBERON:0001434!9.82e-11!101;UBERON:0000467!3.27e-10!625;UBERON:0000480!6.30e-10!626;UBERON:0000468!1.99e-08!659;UBERON:0000062!7.97e-08!511;UBERON:0000922!1.48e-07!612;UBERON:0002050!5.61e-07!605;UBERON:0005423!5.61e-07!605;UBERON:0000923!6.60e-07!604;UBERON:0005291!6.60e-07!604;UBERON:0006598!6.60e-07!604;UBERON:0002532!6.60e-07!604;UBERON:0005631!8.30e-07!14;UBERON:0000158!8.30e-07!14 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,5.10e-23,203;UBERON:0002390,1.61e-18,98;UBERON:0003061,1.61e-18,98;UBERON:0002193,1.57e-17,108;UBERON:0001474,1.59e-16,82;UBERON:0002371,7.82e-16,76;UBERON:0002405,2.21e-14,93;UBERON:0000926,1.75e-13,315;UBERON:0004120,1.75e-13,315;UBERON:0006603,1.75e-13,315;UBERON:0004765,1.89e-13,90;UBERON:0001434,1.01e-10,100;UBERON:0005423,5.69e-08,581;UBERON:0000922,8.67e-08,592;UBERON:0005631,8.30e-07,14;UBERON:0000158,8.30e-07,14 | |||
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|short_description=p1@PACSIN2 | |short_description=p1@PACSIN2 | ||
}} | }} |
Latest revision as of 01:16, 25 September 2015
Short description: | p1@PACSIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PACSIN2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000263246, ENST00000337959, ENST00000453643, uc003bdg.3_5end |
EntrezGene: | PACSIN2 |
HGNC: | 8571 |
UniProt: | Q9UNF0B0QYG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.92e-21 | 72 |
granulocyte monocyte progenitor cell | 1.94e-20 | 67 |
defensive cell | 6.44e-19 | 48 |
phagocyte | 6.44e-19 | 48 |
macrophage dendritic cell progenitor | 2.41e-18 | 61 |
monopoietic cell | 2.63e-17 | 59 |
monocyte | 2.63e-17 | 59 |
monoblast | 2.63e-17 | 59 |
promonocyte | 2.63e-17 | 59 |
myeloid lineage restricted progenitor cell | 9.47e-17 | 66 |
classical monocyte | 1.69e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-16 | 42 |
myeloid cell | 2.42e-14 | 108 |
common myeloid progenitor | 2.42e-14 | 108 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 5.10e-23 | 203 |
hematopoietic system | 1.61e-18 | 98 |
blood island | 1.61e-18 | 98 |
hemolymphoid system | 1.57e-17 | 108 |
bone element | 1.59e-16 | 82 |
bone marrow | 7.82e-16 | 76 |
immune system | 2.21e-14 | 93 |
mesoderm | 1.75e-13 | 315 |
mesoderm-derived structure | 1.75e-13 | 315 |
presumptive mesoderm | 1.75e-13 | 315 |
skeletal element | 1.89e-13 | 90 |
skeletal system | 1.01e-10 | 100 |
developing anatomical structure | 5.69e-08 | 581 |
embryo | 8.67e-08 | 592 |
extraembryonic membrane | 8.30e-07 | 14 |
membranous layer | 8.30e-07 | 14 |