FFCP PHASE1:Hg19::chr22:44577612..44577668,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:44577612..44577668,+ to FFCP PHASE1:Hg19::chr22:44577612..44577668,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64098 | |EntrezGene=64098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14654 | |HGNC=14654 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000471836,ENST00000475485,uc003ber.2_5end | |||
|cluster_id=chr22:44577612..44577668,+ | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_1_at_PARVG_5end | |||
|id=chr22:44577612..44577668,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.83e-73!172;CL:0000566!1.83e-73!172;CL:0002032!9.93e-69!165;CL:0000837!9.93e-69!165;CL:0000738!3.69e-66!140;CL:0000988!9.88e-66!182;CL:0002031!5.29e-54!124;CL:0002087!5.53e-53!119;CL:0000763!2.93e-52!112;CL:0000049!2.93e-52!112;CL:0000766!2.65e-46!76;CL:0000557!3.33e-41!71;CL:0000839!1.27e-39!70;CL:0002009!3.23e-38!65;CL:0002194!2.45e-37!63;CL:0000576!2.45e-37!63;CL:0000040!2.45e-37!63;CL:0000559!2.45e-37!63;CL:0002057!3.58e-33!42;CL:0000860!1.87e-29!45;CL:0000542!5.26e-14!53;CL:0000051!5.26e-14!53;CL:0000838!1.22e-13!52;CL:0000134!2.10e-11!358;CL:0002320!1.46e-10!365;CL:0000791!1.24e-09!18;CL:0000789!1.24e-09!18;CL:0002420!1.24e-09!18;CL:0002419!1.24e-09!18;CL:0000790!1.24e-09!18;CL:0002393!3.62e-09!9;CL:0002397!3.62e-09!9;CL:0000094!5.71e-08!8;CL:0000084!9.05e-08!25;CL:0000827!9.05e-08!25;CL:0000219!2.29e-07!390;CL:0000625!5.99e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.95e-26;48!CL:0000473;6.77e-26;39!CL:0000234;6.77e-26;39!CL:0000860;7.81e-26;33!CL:0002057;7.81e-26;33!CL:0000766;8.94e-24;69!CL:0000763;2.25e-17;100!CL:0002087;1.13e-16;104!CL:0000738;7.46e-16;136!CL:0000988;1.15e-12;177!CL:0000791;1.09e-10;18!CL:0000789;1.09e-10;18!CL:0002419;1.09e-10;18!CL:0000094;8.95e-09;8!CL:0000542;4.44e-08;53!CL:0000625;1.25e-07;11!CL:0000084;1.26e-07;25!CL:0002393;3.86e-07;6!CL:0002397;3.86e-07;6!CL:0000451;4.04e-07;10!CL:0000219;7.90e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.07e-81,168;CL:0002032,4.19e-76,161;CL:0000837,4.19e-76,161;CL:0000738,1.10e-75,136;CL:0000988,2.53e-74,177;CL:0002031,6.17e-61,120;CL:0002087,8.20e-61,115;CL:0000763,1.10e-60,108;CL:0000049,1.10e-60,108;CL:0000766,2.42e-57,72;CL:0000557,2.02e-51,67;CL:0000839,2.03e-48,66;CL:0002009,3.94e-48,61;CL:0002194,3.53e-47,59;CL:0000576,3.53e-47,59;CL:0000040,3.53e-47,59;CL:0000559,3.53e-47,59;CL:0000473,2.76e-42,48;CL:0000234,2.76e-42,48;CL:0000860,3.92e-37,42;CL:0002057,3.92e-37,42;CL:0000134,8.23e-14,354;CL:0000542,1.13e-13,53;CL:0000051,1.13e-13,53;CL:0000838,2.84e-13,52;CL:0002320,1.01e-12,361;CL:0000791,1.22e-10,18;CL:0000789,1.22e-10,18;CL:0002420,1.22e-10,18;CL:0002419,1.22e-10,18;CL:0000790,1.22e-10,18;CL:0002393,4.08e-10,9;CL:0002397,4.08e-10,9;CL:0000219,2.34e-09,386;CL:0000094,9.03e-09,8;CL:0000625,1.27e-07,11;CL:0000084,1.42e-07,25;CL:0000827,1.42e-07,25;CL:0000451,4.34e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-26;42!CL:0000049;6.42e-17;108!CL:0000790;1.09e-10;18!CL:0000051;4.44e-08;53 | |||
|ontology_enrichment_disease=DOID:1240!3.19e-07!39;DOID:8692!5.77e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.44e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-43!102;UBERON:0003061!2.46e-43!102;UBERON:0002193!2.85e-38!112;UBERON:0002371!3.46e-34!80;UBERON:0001474!2.20e-30!86;UBERON:0007023!2.05e-28!115;UBERON:0002405!3.29e-25!115;UBERON:0004765!5.53e-24!101;UBERON:0001434!5.53e-24!101;UBERON:0002384!9.05e-10!375;UBERON:0003081!1.02e-08!216;UBERON:0000178!1.17e-07!15;UBERON:0000179!1.17e-07!15;UBERON:0000463!1.17e-07!15;UBERON:0001049!1.59e-07!57;UBERON:0005068!1.59e-07!57;UBERON:0006241!1.59e-07!57;UBERON:0007135!1.59e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-08;15!UBERON:0000179;1.07e-08;15!UBERON:0000463;1.07e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.55e-54,98;UBERON:0003061,6.55e-54,98;UBERON:0002193,3.21e-48,108;UBERON:0002371,3.00e-43,76;UBERON:0002405,6.84e-40,93;UBERON:0001474,6.23e-38,82;UBERON:0004765,5.20e-32,90;UBERON:0001434,1.60e-27,100;UBERON:0007023,1.14e-18,114;UBERON:0003081,8.51e-15,203;UBERON:0002384,5.17e-12,371;UBERON:0000178,1.07e-08,15;UBERON:0000179,1.07e-08,15;UBERON:0000463,1.07e-08,15;UBERON:0002204,1.81e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.45185470921107,1.06730766284929,1.10195093839151,65.691834233767,22.2621050896383,76.3243487948255,0,0,0,0,0.568676929949686,7.04641054403633,61.4934903470384,44.7214117858416,60.5460329297227,80.8334862006127,38.8672399222775,64.909043043815,48.2722152748155,42.6999816368355,45.1206353809338,45.5560912335142,34.1269347058115,37.4744708783075,51.7846306179871,37.1433024467196,37.8371567821736,48.6091409838632,38.0835963314457,27.0852973188684,51.7666433742163,35.7507056575778,30.3376704000864,47.4430033174899,37.869625194979,30.688182038354,44.5299255252067,40.092195181948,38.3602275479425,47.8845243737164,40.2843509530709,39.2378016867212,46.4810030724975,49.0193943314989,37.3564812892801,38.7455681685356,36.8277635987565,37.3425617180244,138.372212534322,116.294552080879,134.810509061886,95.9286509991068,88.1538360979642,97.7211567118247,139.371231689471,139.83842407096,158.187157160173,8.79981222306614,14.7457425040775,15.1216573156804,13.2286368995617,18.0178194166206,24.7143549180428,15.2040320740518,16.2189138271012,19.3532409497212,15.8554041130153,10.3213771593812,6.60856642895129,7.8471198817415,7.37475437370216,6.09800287352883,5.10913991573914,10.2800749499755,28.0873312256339,7.49621213257258,3.78758244587787,9.74133642039557,18.4941358429388,11.1950244840438,11.5197625183483,20.8518975099062,22.8002549111702,26.5321069022152,22.856868739911,23.2134014940113,14.7799573724877,4.00373720537563,5.88589821797369,7.31748666634838,20.8489190563522,13.4127172760672,12.026960591892,12.3979649089556,10.1940932583711,11.7195021694155,19.0090408889675,13.250610478844,14.7184602827581,14.9916871862815,18.4686256594333,15.6014319414999,11.4915843638097,6.15112450302067,9.70323506014753,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.76821751921912,0,0,16.2273696827342,21.0696982132113,26.4586341432542,24.5645343034502,24.0237862527654,18.9443325678078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.3011878462285,108.578473961531,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,3.9313088667105,2.95394953340702,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.2282692418291,30.1865502029617,32.5502245412315,0,0,0,0,0,0,2.46331618947972,10.3016667795474,9.12243708379397,12.1060760870248,8.58448547299384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.5683232244167,70.8182498919298,46.383466686267,0,0,0,0,0,0,3.13838403181876,14.7773070151445,8.62510299438069,10.2674429023799,0,0,0,0.502548796003046,0,116.84509573576,56.8406772487647,100.702969764957,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7031882580306,47.8885525817329,29.4568059537506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.8300481571743,0,0,0,12.4679624093744,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,1.26664581178598,0,0,0,0,0.670302275535787,0,14.0274263157401,0,0,0,0,66.9830844186464,70.3466230570985,100.257904942653,52.4109906007136,53.4770955012052,74.5744307871625,73.4442754643836,65.8293896324244,0,0,0,6.68891430452587,0.432807638929335,0.497992903438899,1.27541018183058,0.59873811429845,9.00075239622124,15.4521715388434,8.764792387413,10.9510899464249,9.58585651939407,7.36395510133209,27.5697924799074,5.0787533340481,6.58411107925168,9.08098682359714,8.0910785161162,18.5492886168113,13.2113528652637,14.3152709051146,12.847383911817,5.27547857585509,0,1.23087398947712,4.59774653409171,0.66614393599564,2.81974010175699,0,8.79049075631364,0,0,0,0,0.890894042497916,0,0,4.07941307590487,0,0,0,3.38721580026819,14.3667636076197,0,0,2.70786572014353,0,0,0,15.3471711068062,1.57829449019094,67.0552658571431,0,1.93866549219044,0.556608588971108,0,0,0,4.34999745260876,0,0,0,0,0,0,1.77148277162768,2.89431452700979,3.05163472634166,1.43753037910592,0.886642856860642,0.438770794307945,0,0,1.76985594558733,0,0,0,0,0.957003479195758,0.0915975934018623,2.13213910407454,4.08773192782946,6.12222999940597,6.64846727600626,0,0,0,0,1.58936578980379,0,0,0,0,6.96683351754953,3.98059040265026,3.05515072466813,0,0,0,2.76344645220776,0.802577647298789,0.702793337176017,0,0,0,0.789168805698781,1.20990716048664,0.61214552326098,4.04394109622323,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,2.90967049465258,0,1.12990370390266,0,0,0.759729551470544,0,0,2.77488893161158,0,0,0,0,0,0,0.235694034616795,0,0,0,0,4.20294202096853,7.11907970238364,52.3761011074587,0,0,3.35138881526705,1.14580212005842,5.74298419661451,1.59743200399193,1.71690419254628,8.03417246790741,1.2764859772478,0,0,0,0,0,0,0,2.38568906942791,4.63091580779357,0,0,0,6.29926896344201,10.8332273638113,1.39723980313457,0,2.67939404817274,1.04909176269996,0.105600336519406,0,0,7.14695326373367,5.2967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| ||
|short_description=p1@PARVG | |||
}} | }} |
Latest revision as of 02:31, 25 September 2015
Short description: | p1@PARVG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARVG_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 0bp_to_ENST00000471836, ENST00000475485, uc003ber.2_5end |
EntrezGene: | PARVG |
HGNC: | 14654 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.55e-54 | 98 |
blood island | 6.55e-54 | 98 |
hemolymphoid system | 3.21e-48 | 108 |
bone marrow | 3.00e-43 | 76 |
immune system | 6.84e-40 | 93 |
bone element | 6.23e-38 | 82 |
skeletal element | 5.20e-32 | 90 |
skeletal system | 1.60e-27 | 100 |
adult organism | 1.14e-18 | 114 |
lateral plate mesoderm | 8.51e-15 | 203 |
connective tissue | 5.17e-12 | 371 |
blood | 1.07e-08 | 15 |
haemolymphatic fluid | 1.07e-08 | 15 |
organism substance | 1.07e-08 | 15 |
musculoskeletal system | 1.81e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.44e-07 | 31 |