FFCP PHASE1:Hg19::chr6:138192218..138192238,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7A9,F5GYN2,F5H1G3 | |UniProt=F5H7A9,F5GYN2,F5H1G3 | ||
|association_with_transcript=-109bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | |association_with_transcript=-109bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | ||
|cluster_id=chr6:138192218..138192238,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_TNFAIP3_5end | |description=CAGE_peak_3_at_TNFAIP3_5end | ||
|id=chr6:138192218..138192238,+ | |id=chr6:138192218..138192238,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.03e-36!140;CL:0000766!2.41e-28!76;CL:0002087!1.78e-27!119;CL:0002031!5.01e-27!124;CL:0002057!3.03e-25!42;CL:0000037!2.18e-23!172;CL:0000566!2.18e-23!172;CL:0002009!3.75e-23!65;CL:0000557!5.28e-23!71;CL:0000988!7.33e-23!182;CL:0002032!1.98e-22!165;CL:0000837!1.98e-22!165;CL:0000860!2.20e-22!45;CL:0002194!7.16e-22!63;CL:0000576!7.16e-22!63;CL:0000040!7.16e-22!63;CL:0000559!7.16e-22!63;CL:0000839!3.93e-21!70;CL:0000763!1.43e-16!112;CL:0000049!1.43e-16!112;CL:0000048!1.17e-14!430;CL:0000723!1.91e-14!436;CL:0000034!2.60e-14!444;CL:0000134!1.18e-10!358;CL:0002320!1.10e-09!365;CL:0000219!4.57e-08!390;CL:0000094!4.92e-08!8;CL:0000359!1.73e-07!32;CL:0000990!6.82e-07!8 | |ontology_enrichment_celltype=CL:0000738!1.03e-36!140;CL:0000766!2.41e-28!76;CL:0002087!1.78e-27!119;CL:0002031!5.01e-27!124;CL:0002057!3.03e-25!42;CL:0000037!2.18e-23!172;CL:0000566!2.18e-23!172;CL:0002009!3.75e-23!65;CL:0000557!5.28e-23!71;CL:0000988!7.33e-23!182;CL:0002032!1.98e-22!165;CL:0000837!1.98e-22!165;CL:0000860!2.20e-22!45;CL:0002194!7.16e-22!63;CL:0000576!7.16e-22!63;CL:0000040!7.16e-22!63;CL:0000559!7.16e-22!63;CL:0000839!3.93e-21!70;CL:0000763!1.43e-16!112;CL:0000049!1.43e-16!112;CL:0000048!1.17e-14!430;CL:0000723!1.91e-14!436;CL:0000034!2.60e-14!444;CL:0000134!1.18e-10!358;CL:0002320!1.10e-09!365;CL:0000219!4.57e-08!390;CL:0000094!4.92e-08!8;CL:0000359!1.73e-07!32;CL:0000990!6.82e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.84e-28;33!CL:0002057;1.84e-28;33!CL:0000473;1.07e-24;39!CL:0000234;1.07e-24;39!CL:0000576;1.76e-16;48!CL:0000766;4.15e-16;69!CL:0000094;5.93e-13;8!CL:0002087;3.71e-12;104!CL:0000081;1.85e-11;11!CL:0000738;3.96e-11;136!CL:0000990;2.35e-09;8!CL:0000453;5.24e-08;5!CL:0000988;1.22e-07;177!CL:0000451;2.29e-07;10!CL:0000219;3.67e-07;193!CL:0000763;4.20e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.30e-54,136;CL:0000988,4.82e-40,177;CL:0000766,3.26e-39,72;CL:0000037,6.03e-39,168;CL:0002031,1.45e-38,120;CL:0002087,2.39e-38,115;CL:0002032,1.65e-37,161;CL:0000837,1.65e-37,161;CL:0000473,6.75e-32,48;CL:0000234,6.75e-32,48;CL:0000860,1.33e-31,42;CL:0002057,1.33e-31,42;CL:0000557,9.30e-31,67;CL:0002009,9.23e-30,61;CL:0000839,4.77e-28,66;CL:0002194,1.17e-27,59;CL:0000576,1.17e-27,59;CL:0000040,1.17e-27,59;CL:0000559,1.17e-27,59;CL:0000763,2.28e-27,108;CL:0000049,2.28e-27,108;CL:0000048,8.28e-19,427;CL:0000034,1.07e-18,441;CL:0000723,3.92e-18,433;CL:0000134,8.37e-17,354;CL:0002320,5.65e-16,361;CL:0000219,4.34e-13,386;CL:0000094,5.85e-13,8;CL:0000081,1.83e-11,11;CL:0000838,1.19e-09,52;CL:0000990,1.99e-09,8;CL:0000542,2.38e-09,53;CL:0000051,2.38e-09,53;CL:0000453,4.93e-08,5;CL:0000451,2.01e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.55e-23;42!CL:0000049;6.36e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.68e-22!112;UBERON:0002390!8.04e-21!102;UBERON:0003061!8.04e-21!102;UBERON:0002405!7.45e-20!115;UBERON:0002371!1.26e-19!80;UBERON:0001474!9.32e-17!86;UBERON:0002204!6.06e-15!167;UBERON:0003081!4.88e-14!216;UBERON:0004765!7.77e-13!101;UBERON:0001434!7.77e-13!101;UBERON:0002384!5.32e-09!375;UBERON:0004573!3.15e-07!33;UBERON:0004571!3.15e-07!33;UBERON:0001637!7.89e-07!42;UBERON:0003509!7.89e-07!42;UBERON:0004572!7.89e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!7.68e-22!112;UBERON:0002390!8.04e-21!102;UBERON:0003061!8.04e-21!102;UBERON:0002405!7.45e-20!115;UBERON:0002371!1.26e-19!80;UBERON:0001474!9.32e-17!86;UBERON:0002204!6.06e-15!167;UBERON:0003081!4.88e-14!216;UBERON:0004765!7.77e-13!101;UBERON:0001434!7.77e-13!101;UBERON:0002384!5.32e-09!375;UBERON:0004573!3.15e-07!33;UBERON:0004571!3.15e-07!33;UBERON:0001637!7.89e-07!42;UBERON:0003509!7.89e-07!42;UBERON:0004572!7.89e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.10e-27,98;UBERON:0003061,6.10e-27,98;UBERON:0002193,9.17e-27,108;UBERON:0002371,1.57e-25,76;UBERON:0002405,1.84e-24,93;UBERON:0001474,1.07e-22,82;UBERON:0004765,1.58e-19,90;UBERON:0001434,2.59e-16,100;UBERON:0003081,7.27e-15,203;UBERON:0002384,7.52e-15,371;UBERON:0002204,1.46e-12,167;UBERON:0000926,1.09e-08,315;UBERON:0004120,1.09e-08,315;UBERON:0006603,1.09e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0,0.975865597581014,0,0,0,0,0,0.125542639594803,4.58480434487708,3.85872770414745,3.06972047123349,2.75354993794233,9.97956435052753,3.09632246632152,0,0,0,0,0.142169232487422,0,44.3196326825502,41.111611731379,20.3990218472901,0.223915474239924,0.32389366601898,0.257575567634187,0.581592955118259,0,1.69808842831471,21.1510423584173,16.8578834088949,24.1570969298181,25.3169305243492,15.8819638048042,33.3439944142905,167.891146518733,87.7859169674004,85.3186865544353,7.52969358170419,6.82265375144614,21.124007537838,121.209221378877,97.8833532582086,104.851288631043,1.31940520074686,0.598390972864896,1.70489900213078,203.726885517266,187.804509372767,154.459917750903,2.26123798731069,1.5644487552606,4.77815458351257,168.90646123471,205.130643245074,219.308434496533,0.633765858935825,2.76385589954557,0.419317291016752,0.112328631146495,0.300353785683013,0.964353520182481,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,4.69789751496751,0.764546456250458,2.64342657158052,22.4203425192614,0,1.57367816091066,3.93010762749165,2.46721798799411,0,0.977766799900771,0.473447805734733,0,0.111410456885174,2.3568472597987,0.664601683750863,0.812411591295047,0,0,0,0,0,0.593146252648242,1.07016331235885,0,0,2.68254345521345,2.40539211837841,1.26509846009751,0,0,1.90090408889675,0,0,0,0,0,3.83052812126992,2.94184215361858,1.15859523106239,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,1.29818957461873,1.39303789839414,0.26591592103773,1.66943437013739,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.8985168820977,65.9226449052153,0,0.496971951695318,0.25326102332916,12.1816446348161,0.573673241497627,0,0,0,0.24666754841716,0,0.404132016209064,0,0,0,0,0,0.570471821544449,0.747243402759005,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.370353780634118,0,0,0,0,0,2.88732895522148,3.24089858803628,3.61482889245737,0,0,0,7.02012795417713,1.48631162288728,0,0.503946384596579,0.141775097242386,1.97028749946266,0.871901815541886,0,0,0,1.65862492432618,4.17947864909188,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,3.31583314765545,0,0.699810938274399,1.2162378064119,0.502257091432126,0,0,0,0,0,0.410952645100767,0.358121926479791,0,2.75843064282698,1.94064817373566,2.05348858047597,0,0,0,0,0,23.2192177423627,11.966458368161,12.4324654030811,0,0,0,0,0,0,0.468565659970853,0,0,0,0,0.368738337083406,0,0,0,2.06768026122887,5.39285502046542,8.21802195086521,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,1.14853107599234,0,1.6068392984416,0,0,0,0.413509717453592,0.537101224341368,0.145016693914229,0.170453254832202,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0.464845549297286,1.5740617341532,1.3940745403212,4.92853728281742,0.532306030317022,4.34966496037536,2.22389062924704,1.43124886741991,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0.117812402345686,2.42618977887979,0,0.421258456238981,0,2.92456187557541,1.05650146756755,0,0,0,0.551365343546124,3.3171948762061,2.63070531152258,0,0,0.405820753925408,0.92947049429925,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,1.78309414843965,0,0.23874448473769,0.593929361665277,0,0,0,0.890469640183247,0.329607748453519,0,0.19924798825107,0.552567831062295,0,0.102268682502155,5.90807066213134,0,0.0898683511473268,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24133456896206,0,0,0,1.27600463892768,0,1.06606955203727,0,0,0,0,0,0,0,0,0.843992258112108,0,0,0,0,0,0.611030144933625,80.6537470011292,36.5749259281648,30.3867873060875,0,0.802577647298789,0,0,0,0,0,0,0,0.379119477770928,0.300646838828985,0,0.664653872707185,0,0,0,0,0,0,1.07791637155815,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,4.46908502274835,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0,0.360299883542404,1.16495949527454,0,0.0824158583811665,0.13480708770837,0.0984274815147488,1.6087933092499,0,0,0,0,0,7.64911231275102,1.5476039091159,0,0,0,0.104909176269996,0,8.42650494864371,0,0,0,0,1.62899880526114,0,0.326587360109409,0,0.656740165994712,0,0,0,0,0,0.13223260174269,0,0,1.38823636338003,1.25763444079733,0,0.496166021811951,0,0.487170393523584,0,4.35214242695579,2.0055191521816,6.43325711203269,8.52468839845491,0,0,0,0,0,0,0,0,0,0.151649117541648,1.7127920012698,0,0,0,0,0.233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| ||
|short_description=p3@TNFAIP3 | |short_description=p3@TNFAIP3 | ||
}} | }} |
Latest revision as of 03:25, 25 September 2015
Short description: | p3@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFAIP3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -109bp_to_ENST00000535332, ENST00000535574, ENST00000539356_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2F5H1G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.10e-27 | 98 |
blood island | 6.10e-27 | 98 |
hemolymphoid system | 9.17e-27 | 108 |
bone marrow | 1.57e-25 | 76 |
immune system | 1.84e-24 | 93 |
bone element | 1.07e-22 | 82 |
skeletal element | 1.58e-19 | 90 |
skeletal system | 2.59e-16 | 100 |
lateral plate mesoderm | 7.27e-15 | 203 |
connective tissue | 7.52e-15 | 371 |
musculoskeletal system | 1.46e-12 | 167 |
mesoderm | 1.09e-08 | 315 |
mesoderm-derived structure | 1.09e-08 | 315 |
presumptive mesoderm | 1.09e-08 | 315 |