FFCP PHASE1:Hg19::chr12:85306494..85306558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55117 | |EntrezGene=55117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13621 | |HGNC=13621 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H9F5,F8VX16 | |UniProt=Q9H9F5,F8VX16 | ||
|association_with_transcript=13bp_to_ENST00000450363,ENST00000551612_5end | |association_with_transcript=13bp_to_ENST00000450363,ENST00000551612_5end | ||
|cluster_id=chr12:85306494..85306558,- | |||
|coexpression_cluster_id=C2246 | |||
|description=CAGE_peak_1_at_SLC6A15_5end | |description=CAGE_peak_1_at_SLC6A15_5end | ||
|id=chr12:85306494..85306558,- | |id=chr12:85306494..85306558,- | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-11!180;CL:0000221!5.50e-11!71;CL:0002321!1.24e-10!248;CL:0000220!1.71e-10!246;CL:0000393!1.71e-09!60;CL:0000211!1.71e-09!60;CL:0000680!4.19e-09!57;CL:0000056!4.19e-09!57;CL:0000355!4.19e-09!57;CL:0000187!1.93e-08!54;CL:0000133!1.95e-08!59;CL:0000183!2.54e-08!59;CL:0000333!4.88e-08!41 | |ontology_enrichment_celltype=CL:0000055!1.29e-11!180;CL:0000221!5.50e-11!71;CL:0002321!1.24e-10!248;CL:0000220!1.71e-10!246;CL:0000393!1.71e-09!60;CL:0000211!1.71e-09!60;CL:0000680!4.19e-09!57;CL:0000056!4.19e-09!57;CL:0000355!4.19e-09!57;CL:0000187!1.93e-08!54;CL:0000133!1.95e-08!59;CL:0000183!2.54e-08!59;CL:0000333!4.88e-08!41 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.30e-10,72;CL:0002321,9.92e-10,250;CL:0000393,1.14e-09,61;CL:0000211,1.14e-09,61;CL:0000680,3.05e-09,58;CL:0000056,3.05e-09,58;CL:0000355,3.05e-09,58;CL:0000187,1.58e-08,55;CL:0000333,4.37e-08,41;CL:0000133,5.73e-08,59;CL:0000192,9.72e-07,43;CL:0000514,9.72e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.62e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;6.35e-14;34!UBERON:0002020;6.35e-14;34!UBERON:0002780;7.04e-14;41!UBERON:0001890;7.04e-14;41!UBERON:0001869;8.99e-14;32!UBERON:0002619;9.25e-14;22!UBERON:0001893;1.28e-13;34!UBERON:0002791;1.45e-13;32!UBERON:0000073;2.15e-13;53!UBERON:0002616;2.15e-13;53!UBERON:0001950;1.33e-12;20!UBERON:0000955;1.15e-11;68!UBERON:0000956;1.27e-11;25!UBERON:0000203;1.27e-11;25!UBERON:0001017;1.06e-10;75!UBERON:0001016;2.44e-10;83!UBERON:0001032;1.50e-07;24!UBERON:0004456;1.50e-07;24!UBERON:0002104;2.82e-07;21!UBERON:0000020;3.23e-07;23!UBERON:0000970;6.10e-07;20!UBERON:0010371;9.56e-07;31 | |||
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| ||
|short_description=p1@SLC6A15 | |short_description=p1@SLC6A15 | ||
}} | }} |
Latest revision as of 03:34, 25 September 2015
Short description: | p1@SLC6A15 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A15_5end |
Coexpression cluster: | C2246_carcinoid_Fibroblast_neuroblastoma_salivary_anaplastic_epitheloid_melanoma |
Association with transcript: | 13bp_to_ENST00000450363, ENST00000551612_5end |
EntrezGene: | SLC6A15 |
HGNC: | 13621 |
UniProt: | Q9H9F5F8VX16 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.30e-10 | 72 |
embryonic cell | 9.92e-10 | 250 |
electrically responsive cell | 1.14e-09 | 61 |
electrically active cell | 1.14e-09 | 61 |
muscle precursor cell | 3.05e-09 | 58 |
myoblast | 3.05e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-09 | 58 |
muscle cell | 1.58e-08 | 55 |
migratory neural crest cell | 4.37e-08 | 41 |
neurectodermal cell | 5.73e-08 | 59 |
smooth muscle cell | 9.72e-07 | 43 |
smooth muscle myoblast | 9.72e-07 | 43 |