FFCP PHASE1:Hg19::chr6:138195518..138195568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=Q5PY18 | |UniProt=Q5PY18 | ||
|association_with_transcript=-428bp_to_AY820830_5end | |association_with_transcript=-428bp_to_AY820830_5end | ||
|cluster_id=chr6:138195518..138195568,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_7_at_TNFAIP3_5end | |description=CAGE_peak_7_at_TNFAIP3_5end | ||
|id=chr6:138195518..138195568,+ | |id=chr6:138195518..138195568,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.48e-53!140;CL:0000766!3.36e-52!76;CL:0002057!2.14e-49!42;CL:0000860!3.25e-45!45;CL:0000557!2.58e-42!71;CL:0002009!1.46e-41!65;CL:0000988!5.34e-41!182;CL:0000037!3.60e-40!172;CL:0000566!3.60e-40!172;CL:0000839!6.09e-39!70;CL:0000763!6.13e-39!112;CL:0000049!6.13e-39!112;CL:0002194!6.17e-39!63;CL:0000576!6.17e-39!63;CL:0000040!6.17e-39!63;CL:0000559!6.17e-39!63;CL:0002032!1.02e-38!165;CL:0000837!1.02e-38!165;CL:0002031!1.97e-37!124;CL:0002087!6.77e-37!119;CL:0000134!2.65e-20!358;CL:0002320!2.11e-19!365;CL:0000723!1.23e-16!436;CL:0000048!1.24e-16!430;CL:0000034!1.53e-16!444;CL:0000219!3.00e-16!390;CL:0000094!2.52e-14!8;CL:0000990!1.63e-13!8;CL:0000081!1.36e-12!11;CL:0000451!1.13e-10!10;CL:0000080!3.73e-10!6;CL:0000840!3.14e-09!5;CL:0001029!3.14e-09!5;CL:0000453!9.41e-09!5;CL:0000063!1.61e-08!578;CL:0002371!2.77e-08!591;CL:0000144!1.17e-07!625;CL:0000012!3.41e-07!682;CL:0000548!7.69e-07!679;CL:0000004!7.69e-07!679;CL:0000255!7.69e-07!679 | |ontology_enrichment_celltype=CL:0000738!2.48e-53!140;CL:0000766!3.36e-52!76;CL:0002057!2.14e-49!42;CL:0000860!3.25e-45!45;CL:0000557!2.58e-42!71;CL:0002009!1.46e-41!65;CL:0000988!5.34e-41!182;CL:0000037!3.60e-40!172;CL:0000566!3.60e-40!172;CL:0000839!6.09e-39!70;CL:0000763!6.13e-39!112;CL:0000049!6.13e-39!112;CL:0002194!6.17e-39!63;CL:0000576!6.17e-39!63;CL:0000040!6.17e-39!63;CL:0000559!6.17e-39!63;CL:0002032!1.02e-38!165;CL:0000837!1.02e-38!165;CL:0002031!1.97e-37!124;CL:0002087!6.77e-37!119;CL:0000134!2.65e-20!358;CL:0002320!2.11e-19!365;CL:0000723!1.23e-16!436;CL:0000048!1.24e-16!430;CL:0000034!1.53e-16!444;CL:0000219!3.00e-16!390;CL:0000094!2.52e-14!8;CL:0000990!1.63e-13!8;CL:0000081!1.36e-12!11;CL:0000451!1.13e-10!10;CL:0000080!3.73e-10!6;CL:0000840!3.14e-09!5;CL:0001029!3.14e-09!5;CL:0000453!9.41e-09!5;CL:0000063!1.61e-08!578;CL:0002371!2.77e-08!591;CL:0000144!1.17e-07!625;CL:0000012!3.41e-07!682;CL:0000548!7.69e-07!679;CL:0000004!7.69e-07!679;CL:0000255!7.69e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.94e-68;33!CL:0002057;5.94e-68;33!CL:0000473;5.25e-47;39!CL:0000234;5.25e-47;39!CL:0000576;2.44e-38;48!CL:0000094;7.59e-31;8!CL:0000766;9.67e-31;69!CL:0000081;5.67e-28;11!CL:0000763;3.62e-15;100!CL:0002087;3.26e-14;104!CL:0000775;6.52e-13;3!CL:0000738;9.16e-13;136!CL:0000453;4.64e-12;5!CL:0000767;7.80e-12;3!CL:0000771;1.30e-09;2!CL:0000988;3.31e-09;177!CL:0000219;2.67e-07;193!CL:0000990;9.72e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.82e-73,42;CL:0002057,1.82e-73,42;CL:0000766,7.27e-67,72;CL:0000473,2.29e-63,48;CL:0000234,2.29e-63,48;CL:0000738,5.04e-54,136;CL:0000763,2.09e-52,108;CL:0000049,2.09e-52,108;CL:0002009,6.65e-51,61;CL:0002194,3.14e-49,59;CL:0000576,3.14e-49,59;CL:0000040,3.14e-49,59;CL:0000559,3.14e-49,59;CL:0000557,9.49e-46,67;CL:0000988,9.57e-46,177;CL:0000839,2.54e-43,66;CL:0000037,6.11e-42,168;CL:0002032,4.75e-40,161;CL:0000837,4.75e-40,161;CL:0002087,1.65e-33,115;CL:0000094,7.45e-31,8;CL:0002031,7.22e-30,120;CL:0000081,5.67e-28,11;CL:0000134,9.35e-15,354;CL:0002320,2.82e-14,361;CL:0000775,6.39e-13,3;CL:0000219,1.38e-12,386;CL:0000453,5.07e-12,5;CL:0000767,7.80e-12,3;CL:0000034,1.26e-10,441;CL:0000048,1.61e-10,427;CL:0000723,3.11e-10,433;CL:0000771,1.30e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-55;42!CL:0000049;9.39e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-37!102;UBERON:0003061!5.88e-37!102;UBERON:0002371!8.11e-36!80;UBERON:0002193!2.38e-33!112;UBERON:0001474!3.00e-32!86;UBERON:0002405!3.40e-27!115;UBERON:0004765!2.03e-26!101;UBERON:0001434!2.03e-26!101;UBERON:0002384!8.21e-19!375;UBERON:0002204!1.52e-14!167;UBERON:0003081!1.52e-14!216 | |ontology_enrichment_uberon=UBERON:0002390!5.88e-37!102;UBERON:0003061!5.88e-37!102;UBERON:0002371!8.11e-36!80;UBERON:0002193!2.38e-33!112;UBERON:0001474!3.00e-32!86;UBERON:0002405!3.40e-27!115;UBERON:0004765!2.03e-26!101;UBERON:0001434!2.03e-26!101;UBERON:0002384!8.21e-19!375;UBERON:0002204!1.52e-14!167;UBERON:0003081!1.52e-14!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-43,98;UBERON:0003061,1.31e-43,98;UBERON:0002371,1.59e-39,76;UBERON:0002193,8.04e-39,108;UBERON:0001474,3.98e-36,82;UBERON:0002405,2.61e-33,93;UBERON:0004765,2.71e-32,90;UBERON:0001434,2.34e-28,100;UBERON:0003081,8.80e-17,203;UBERON:0002204,3.93e-14,167;UBERON:0002384,1.27e-13,371;UBERON:0000926,6.36e-08,315;UBERON:0004120,6.36e-08,315;UBERON:0006603,6.36e-08,315 | |||
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|short_description=p7@TNFAIP3 | |short_description=p7@TNFAIP3 | ||
}} | }} |
Latest revision as of 03:40, 25 September 2015
Short description: | p7@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TNFAIP3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -428bp_to_AY820830_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | Q5PY18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-43 | 98 |
blood island | 1.31e-43 | 98 |
bone marrow | 1.59e-39 | 76 |
hemolymphoid system | 8.04e-39 | 108 |
bone element | 3.98e-36 | 82 |
immune system | 2.61e-33 | 93 |
skeletal element | 2.71e-32 | 90 |
skeletal system | 2.34e-28 | 100 |
lateral plate mesoderm | 8.80e-17 | 203 |
musculoskeletal system | 3.93e-14 | 167 |
connective tissue | 1.27e-13 | 371 |
mesoderm | 6.36e-08 | 315 |
mesoderm-derived structure | 6.36e-08 | 315 |
presumptive mesoderm | 6.36e-08 | 315 |