FFCP PHASE1:Hg19::chr9:130027223..130027236,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25425 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=362bp_to_ENST00000485331_5end | |||
|cluster_id=chr9:130027223..130027236,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_14_at_GARNL3_5end | |||
|id=chr9:130027223..130027236,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.50e-25;3!UBERON:0006601;1.91e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.17e-63!57;UBERON:0005068!9.17e-63!57;UBERON:0006241!9.17e-63!57;UBERON:0007135!9.17e-63!57;UBERON:0002616!1.02e-56!59;UBERON:0001017!3.31e-55!82;UBERON:0000073!6.71e-55!94;UBERON:0001016!6.71e-55!94;UBERON:0001893!4.24e-53!34;UBERON:0002020!4.67e-53!34;UBERON:0003528!4.67e-53!34;UBERON:0005743!2.98e-52!86;UBERON:0001869!3.22e-52!32;UBERON:0002791!6.33e-50!33;UBERON:0000955!8.60e-50!69;UBERON:0006238!8.60e-50!69;UBERON:0002619!3.69e-47!22;UBERON:0002780!5.96e-47!41;UBERON:0001890!5.96e-47!41;UBERON:0006240!5.96e-47!41;UBERON:0001950!2.10e-46!20;UBERON:0003080!1.06e-45!42;UBERON:0003075!2.01e-41!86;UBERON:0007284!2.01e-41!86;UBERON:0000956!3.69e-41!25;UBERON:0000203!3.69e-41!25;UBERON:0002346!3.32e-39!90;UBERON:0007023!4.59e-37!115;UBERON:0003056!1.22e-29!61;UBERON:0000033!5.23e-28!123;UBERON:0004121!5.25e-28!169;UBERON:0000924!3.91e-27!173;UBERON:0006601!3.91e-27!173;UBERON:0000153!2.62e-26!129;UBERON:0007811!2.62e-26!129;UBERON:0000200!4.79e-22!6;UBERON:0004733!9.43e-18!12;UBERON:0002028!9.43e-18!12;UBERON:0007277!9.43e-18!12;UBERON:0003076!1.81e-17!15;UBERON:0003057!1.81e-17!15;UBERON:0004732!2.81e-16!13;UBERON:0000025!1.11e-15!194;UBERON:0001871!1.13e-15!7;UBERON:0002680!4.85e-14!9;UBERON:0001895!4.85e-14!9;UBERON:0010092!4.85e-14!9;UBERON:0004111!1.34e-13!241;UBERON:0002308!3.84e-13!9;UBERON:0000125!3.84e-13!9;UBERON:0001872!2.65e-12!5;UBERON:0002021!6.01e-12!5;UBERON:0002771!1.16e-11!3;UBERON:0000988!3.01e-11!3;UBERON:0000477!8.06e-11!286;UBERON:0002298!1.27e-10!8;UBERON:0000064!3.19e-10!219;UBERON:0002420!3.73e-09!9;UBERON:0007245!3.73e-09!9;UBERON:0010009!3.73e-09!9;UBERON:0010011!3.73e-09!9;UBERON:0000454!3.73e-09!9;UBERON:0001870!1.92e-08!2;UBERON:0009663!5.95e-08!7;UBERON:0002148!7.14e-08!2;UBERON:0009662!7.14e-08!2;UBERON:0001875!1.24e-07!2;UBERON:0006514!1.24e-07!2;UBERON:0000483!2.82e-07!309;UBERON:0000119!3.99e-07!312;UBERON:0000013!8.48e-07!5;UBERON:0002410!8.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.47e-64;20!UBERON:0002619;9.09e-59;22!UBERON:0000956;9.52e-52;25!UBERON:0000203;9.52e-52;25!UBERON:0001869;7.92e-41;32!UBERON:0001893;1.73e-37;34!UBERON:0002791;1.04e-35;32!UBERON:0003528;8.62e-34;34!UBERON:0002020;8.62e-34;34!UBERON:0001872;7.78e-27;5!UBERON:0000073;9.25e-27;53!UBERON:0002616;9.25e-27;53!UBERON:0001870;5.69e-26;3!UBERON:0002780;2.45e-24;41!UBERON:0001890;2.45e-24;41!UBERON:0000200;1.07e-22;6!UBERON:0001016;6.09e-19;83!UBERON:0002702;4.62e-18;2!UBERON:0000955;8.27e-16;68!UBERON:0002021;1.38e-15;5!UBERON:0001017;1.86e-15;75!UBERON:0002680;4.94e-15;9!UBERON:0001895;4.94e-15;9!UBERON:0002037;4.38e-13;6!UBERON:0004733;2.51e-11;12!UBERON:0002028;2.51e-11;12!UBERON:0004732;1.81e-10;13!UBERON:0002581;1.10e-09;1!UBERON:0002902;1.10e-09;1!UBERON:0002022;1.10e-09;1!UBERON:0003112;1.10e-09;1!UBERON:0011158;1.10e-09;1!UBERON:0009899;1.10e-09;1!UBERON:0007190;1.10e-09;1!UBERON:0003128;1.10e-09;1!UBERON:0001703;1.10e-09;1!UBERON:0002241;1.10e-09;1!UBERON:0011216;9.58e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.05e-64,20;UBERON:0002619,6.69e-59,22;UBERON:0000956,7.26e-52,25;UBERON:0000203,7.26e-52,25;UBERON:0001869,3.73e-47,32;UBERON:0000073,5.80e-47,53;UBERON:0002616,5.80e-47,53;UBERON:0001049,2.45e-44,56;UBERON:0005068,2.45e-44,56;UBERON:0006241,2.45e-44,56;UBERON:0007135,2.45e-44,56;UBERON:0001893,2.50e-44,34;UBERON:0001017,7.53e-41,81;UBERON:0001016,1.82e-40,89;UBERON:0002791,2.04e-40,32;UBERON:0000955,9.62e-40,68;UBERON:0006238,9.62e-40,68;UBERON:0003528,5.51e-38,34;UBERON:0002020,5.51e-38,34;UBERON:0002780,1.50e-36,41;UBERON:0001890,1.50e-36,41;UBERON:0003080,1.50e-36,41;UBERON:0006240,1.50e-36,41;UBERON:0003075,1.63e-29,82;UBERON:0007284,1.63e-29,82;UBERON:0002346,5.11e-28,86;UBERON:0001872,4.60e-27,5;UBERON:0001870,6.81e-26,3;UBERON:0003056,5.41e-24,61;UBERON:0000200,4.30e-23,6;UBERON:0010371,1.08e-22,104;UBERON:0004121,8.54e-20,171;UBERON:0000924,8.54e-20,171;UBERON:0006601,8.54e-20,171;UBERON:0010314,1.94e-19,132;UBERON:0002702,2.24e-18,2;UBERON:0011216,1.18e-17,223;UBERON:0007023,8.15e-16,114;UBERON:0002021,1.29e-15,5;UBERON:0002680,4.79e-15,9;UBERON:0001895,4.79e-15,9;UBERON:0010092,4.79e-15,9;UBERON:0002037,3.97e-13,6;UBERON:0006215,3.97e-13,6;UBERON:0004733,2.46e-11,12;UBERON:0002028,2.46e-11,12;UBERON:0007277,2.46e-11,12;UBERON:0000025,6.45e-11,192;UBERON:0004732,1.77e-10,13;UBERON:0007190,4.46e-10,1;UBERON:0002902,4.87e-10,1;UBERON:0009899,4.87e-10,1;UBERON:0002022,6.31e-10,1;UBERON:0002581,1.36e-09,1;UBERON:0003112,1.76e-09,1;UBERON:0011158,1.76e-09,1;UBERON:0003128,1.76e-09,1;UBERON:0001703,1.76e-09,1;UBERON:0002241,1.76e-09,1;UBERON:0004761,1.76e-09,1;UBERON:0009617,1.76e-09,1;UBERON:0003076,4.22e-09,15;UBERON:0003057,4.22e-09,15;UBERON:0004111,4.18e-08,240 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02044907978036,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,1.52581736317083,1.76926815889959,1.18219047581419,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,1.53036380815245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,1.70098758642469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,2.003054891304,0,0.110929051536852,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,3.82233733672049,0,0,0,0,0,0,0,0,0,0.642292250964595,0,1.11743701340006,0.41023272848151,1.51243017733031,1.79808856406967,1.29180516505481,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,1.95858995393344,0,1.65349437200947,1.52197944465376,1.64092442705466,0,0,0,0,0,0,0,0,0,0,0,1.4953341254903,1.31545547125698,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,1.01987235286372,1.30905207102113,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p14@GARNL3 | |||
}} |
Latest revision as of 03:58, 25 September 2015
Short description: | p14@GARNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_GARNL3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 362bp_to_ENST00000485331_5end |
EntrezGene: | GARNL3 |
HGNC: | 25425 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data