FFCP PHASE1:Hg19::chr1:221054922..221054933,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4978 | |||
|TSSclassifier=strong | |||
|UniProt=F8VVX3 | |||
|association_with_transcript=338bp_to_ENST00000549319_5end | |||
|cluster_id=chr1:221054922..221054933,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_16_at_HLX_5end | |||
|id=chr1:221054922..221054933,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-68!42;CL:0002194!1.11e-66!63;CL:0000576!1.11e-66!63;CL:0000040!1.11e-66!63;CL:0000559!1.11e-66!63;CL:0002009!2.21e-64!65;CL:0000860!2.18e-63!45;CL:0000839!3.31e-59!70;CL:0000557!2.95e-58!71;CL:0000766!3.48e-57!76;CL:0000763!8.67e-48!112;CL:0000049!8.67e-48!112;CL:0002087!2.27e-35!119;CL:0000738!2.81e-34!140;CL:0002031!1.33e-31!124;CL:0002032!5.30e-31!165;CL:0000837!5.30e-31!165;CL:0000037!5.31e-31!172;CL:0000566!5.31e-31!172;CL:0000988!9.61e-29!182;CL:0000134!9.10e-13!358;CL:0002320!2.57e-12!365;CL:0000048!5.44e-11!430;CL:0000219!9.92e-11!390;CL:0000723!1.10e-10!436;CL:0000034!2.72e-10!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.77e-110;33!CL:0002057;5.77e-110;33!CL:0000473;1.07e-77;39!CL:0000234;1.07e-77;39!CL:0000576;1.35e-50;48!CL:0000766;3.87e-27;69!CL:0000763;1.28e-17;100!CL:0002087;3.40e-16;104!CL:0000738;2.61e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.70e-96,42;CL:0002057,1.70e-96,42;CL:0000473,3.97e-84,48;CL:0000234,3.97e-84,48;CL:0002194,8.43e-67,59;CL:0000576,8.43e-67,59;CL:0000040,8.43e-67,59;CL:0000559,8.43e-67,59;CL:0002009,1.45e-64,61;CL:0000839,1.48e-59,66;CL:0000557,1.22e-58,67;CL:0000766,1.89e-54,72;CL:0000763,1.35e-35,108;CL:0000049,1.35e-35,108;CL:0002087,2.77e-33,115;CL:0002031,8.50e-32,120;CL:0000738,9.17e-28,136;CL:0002032,4.74e-23,161;CL:0000837,4.74e-23,161;CL:0000037,5.58e-22,168;CL:0000988,1.00e-20,177;CL:0000134,6.59e-09,354;CL:0002320,1.13e-08,361;CL:0000219,7.44e-08,386;CL:0000048,7.57e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;2.75e-67;42!CL:0000049;5.18e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.03e-51!80;UBERON:0001474!1.22e-46!86;UBERON:0002390!1.76e-45!102;UBERON:0003061!1.76e-45!102;UBERON:0002193!6.10e-43!112;UBERON:0004765!8.49e-41!101;UBERON:0001434!8.49e-41!101;UBERON:0002405!7.20e-37!115;UBERON:0002204!4.63e-24!167;UBERON:0003081!6.43e-19!216;UBERON:0002384!1.06e-11!375;UBERON:0000926!2.03e-07!448;UBERON:0004120!2.03e-07!448;UBERON:0006603!2.03e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.74e-51,76;UBERON:0001474,1.41e-47,82;UBERON:0004765,3.66e-43,90;UBERON:0002405,1.06e-41,93;UBERON:0002390,1.84e-39,98;UBERON:0003061,1.84e-39,98;UBERON:0001434,1.26e-38,100;UBERON:0002193,1.35e-35,108;UBERON:0002204,3.97e-22,167;UBERON:0003081,1.01e-17,203;UBERON:0000926,2.18e-10,315;UBERON:0004120,2.18e-10,315;UBERON:0006603,2.18e-10,315;UBERON:0002384,2.34e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0.145398238779565,0,0,0.697287110717054,0.411167888021826,0.619412741790207,12.3707728698525,15.8819638048042,11.3511470346521,3.44745680736619,1.29096936716765,1.35426486594342,0.564727018627814,0,0,3.36692281607993,2.56743221660875,1.91801137739712,3.29851300186716,9.17532825059507,6.81959600852311,4.93355705668593,4.53908179752912,3.73693349397345,10.5524439407832,10.429658368404,9.1219314776149,6.05399502633369,7.73383035573886,3.79754864929061,0,0,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308097234229289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686520205190771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@HLX | |||
}} |
Latest revision as of 07:07, 25 September 2015
Short description: | p16@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 338bp_to_ENST00000549319_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | F8VVX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.70e-96 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.70e-96 | 42 |
defensive cell | 3.97e-84 | 48 |
phagocyte | 3.97e-84 | 48 |
monopoietic cell | 8.43e-67 | 59 |
monocyte | 8.43e-67 | 59 |
monoblast | 8.43e-67 | 59 |
promonocyte | 8.43e-67 | 59 |
macrophage dendritic cell progenitor | 1.45e-64 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-59 | 66 |
granulocyte monocyte progenitor cell | 1.22e-58 | 67 |
myeloid leukocyte | 1.89e-54 | 72 |
myeloid cell | 1.35e-35 | 108 |
common myeloid progenitor | 1.35e-35 | 108 |
nongranular leukocyte | 2.77e-33 | 115 |
hematopoietic lineage restricted progenitor cell | 8.50e-32 | 120 |
leukocyte | 9.17e-28 | 136 |
hematopoietic oligopotent progenitor cell | 4.74e-23 | 161 |
hematopoietic multipotent progenitor cell | 4.74e-23 | 161 |
hematopoietic stem cell | 5.58e-22 | 168 |
hematopoietic cell | 1.00e-20 | 177 |
mesenchymal cell | 6.59e-09 | 354 |
connective tissue cell | 1.13e-08 | 361 |
motile cell | 7.44e-08 | 386 |
multi fate stem cell | 7.57e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.74e-51 | 76 |
bone element | 1.41e-47 | 82 |
skeletal element | 3.66e-43 | 90 |
immune system | 1.06e-41 | 93 |
hematopoietic system | 1.84e-39 | 98 |
blood island | 1.84e-39 | 98 |
skeletal system | 1.26e-38 | 100 |
hemolymphoid system | 1.35e-35 | 108 |
musculoskeletal system | 3.97e-22 | 167 |
lateral plate mesoderm | 1.01e-17 | 203 |
mesoderm | 2.18e-10 | 315 |
mesoderm-derived structure | 2.18e-10 | 315 |
presumptive mesoderm | 2.18e-10 | 315 |
connective tissue | 2.34e-08 | 371 |