FFCP PHASE1:Mm9::chr2:117937615..117937635,+: Difference between revisions
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{{FFCP|EntrezGene=21825|HGNC=|MCL_coexpression_id=1182|UniProt=Q80YQ1|association_with_transcript=3bp_to_ENSMUST00000039559_5end|description=CAGE_peak_1_at_Thbs1_5end|id=chr2:117937615..117937635,+|ontology_enrichment_celltype=CL:0000355!8.65e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,8.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!7.05e-09!17;UBERON:0005181!7.05e-09!17;UBERON:0002224!7.05e-09!17;UBERON:0000915!7.05e-09!17;UBERON:0008947!7.05e-09!17;UBERON:0003258!7.05e-09!17;UBERON:0000914!1.83e-08!17;UBERON:0002048!4.71e-07!14;UBERON:0000117!4.71e-07!14;UBERON:0000171!4.71e-07!14;UBERON:0000170!4.71e-07!14;UBERON:0005597!4.71e-07!14;UBERON:0000118!4.71e-07!14;UBERON:0002329!6.83e-07!11;UBERON:0003077!6.83e-07!11;UBERON:0003059!6.83e-07!11;UBERON:0007282!6.83e-07!11;UBERON:0009618!6.83e-07!11;UBERON:0007285!6.83e-07!11;UBERON:0001134!8.65e-07!9;UBERON:0002036!8.65e-07!9;UBERON:0002385!8.65e-07!9;UBERON:0000486!8.65e-07!9;UBERON:0001015!8.65e-07!9;UBERON:0004290!8.65e-07!9;UBERON:0003082!8.65e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.05e-09,17;UBERON:0005181,7.05e-09,17;UBERON:0002224,7.05e-09,17;UBERON:0000915,7.05e-09,17;UBERON:0008947,7.05e-09,17;UBERON:0003258,7.05e-09,17;UBERON:0002048,4.70e-07,14;UBERON:0000117,4.70e-07,14;UBERON:0000171,4.70e-07,14;UBERON:0000170,4.70e-07,14;UBERON:0005597,4.70e-07,14;UBERON:0000118,4.70e-07,14;UBERON:0002100,5.34e-07,90;UBERON:0007524,6.83e-07,11;UBERON:0003077,6.83e-07,11;UBERON:0007285,6.83e-07,11;UBERON:0001134,8.65e-07,9;UBERON:0002036,8.65e-07,9;UBERON:0002385,8.65e-07,9;UBERON:0000486,8.65e-07,9;UBERON:0007503,8.65e-07,9;UBERON:0001015,8.65e-07,9;UBERON:0002329,8.65e-07,9;UBERON:0003082,8.65e-07,9;UBERON:0003059,8.65e-07,9;UBERON:0007282,8.65e-07,9;UBERON:0004290,8.65e-07,9;UBERON:0009618,8.65e-07,9|phase1_expression=89.8435032257894,26.1731555729521,16.3799726180233,3.62957053568196,6.01074875935617,117.683369610235,103.023174502627,0.129123323441576,1.54867594366833,6.55380673701582,0.34243593645101,0.159544317990673,0,0.0874204024189974,39.3069518942482,24.7019826215588,39.1754651751762,13.4071420277251,18.5104485367747,16.1268067683251,40.8207792725135,15.1915155337354,26.6423784921714,6.39969691173627,8.48814339948529,20.0981187440257,21.9688618041128,45.8953725620944,4.56056206695297,5.29263272495855,11.7517170647311,64.7731286928824,47.3599886440119,206.02618532007,13.2871745085586,2.99222361645286,23.6836453264348,482.985501870392,275.811376616902,216.738830005152,1070.58130821645,993.831180614538,631.648969293531,1833.05766972441,1894.73484449273,4293.15853306173,54.7673941043627,1322.32257344741,1620.84465621493,1988.62900773177,347.866257739026,493.071295771852,0.167782606057736,0,4.03312558970957,1308.42149167883,420.344556390156,1473.79083972893,4.45096213891115,7.93486468908049,6.33831403506179,198.901740324581,62.2506357277798,248.822271828307,319.403835109133,269.271963564572,110.252840670773,126.407822450791,19.5973367263023,22.4109857630606,20.8221711737868,9.99778445413313,21.4242484723065,16.046294697159,19.1690942036473,21.1420320920305,0,2.68143409978894,2.30409799884365,5.40733779693795,5.39777097254217,4.68822033501084,1.95428099300967,1.12552522006336,1.98637722109853,21.5078867395777,17.6540884190888,10.8111678578674,24.6110128332848,35.9720626108299,142.323463952524,18.9293252935905,24.478968013479,0,1.94932925234301,0,51.1217689279577,671.154610312391,427.088191567116,521.175872402752,160.843185384969,1840.20168612132,517.254636604491,547.521361428065,678.699413570156,760.839676021721,712.28394302583,34.8260833143133,99.6910852041611,30.1337542301594,31.921300124969,36.2313919191448,36.2066330692012,23.8141772073144,62.6747809033307,14.2003248202533,572.50354527281,103.966937625416,369.767210715047,251.547451668221,195.886426874369,187.161847710196,123.018562403961,4.39171195517321,8.58731497935166,39.5958435573317,13.1796636956512,16.7972764678154,19.568814969252,5.69204429738326,4.11750542536764,8.04187853522332,4.69325664519146,5.11430914660661,3.1168206683934,2.92034273521964,114.671123695456,210.745408213498,8.84529654517861,58.5028359364398,64.4096192665383,38.6235535448235,46.0959052301694,67.0636439368932,108.994471640427,95.0603804513585,83.3008331335989,155.998132555626,51.5207503109493,130.10498315546,192.842432083688,203.194443960362,215.486618149838,157.758231434541,139.520288484586,29.855140022774,70.9235319186367,71.2853702707761,99.4572247884574,140.638399551606,180.819592245425,125.143132715405,136.838457168252,70.2448307338232,62.6324478322756,53.2502733478434,67.604897152704,85.2386999280337,65.6593801154787,69.7711722336155,50.8301435852515,45.9067960515543,52.9115777851432,43.8854989346416,3.78521907415429,22.5361101110633,2.31293148088659,32.2629691329524,42.4443618565116,47.3762810595295,47.2943583052082,57.8831715668993,66.935791197306,74.5684454361232,46.5038480313621,98.9840717891305,57.807098024062,62.07441927683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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21825 | |||
|HGNC= | |||
|MCL_coexpression_id=1182 | |||
|TSSclassifier=NA | |||
|UniProt=Q80YQ1 | |||
|association_with_transcript=3bp_to_ENSMUST00000039559_5end | |||
|cluster_id=chr2:117937615..117937635,+ | |||
|description=CAGE_peak_1_at_Thbs1_5end | |||
|id=chr2:117937615..117937635,+ | |||
|ontology_enrichment_celltype=CL:0000355!8.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,8.65e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!7.05e-09!17;UBERON:0005181!7.05e-09!17;UBERON:0002224!7.05e-09!17;UBERON:0000915!7.05e-09!17;UBERON:0008947!7.05e-09!17;UBERON:0003258!7.05e-09!17;UBERON:0000914!1.83e-08!17;UBERON:0002048!4.71e-07!14;UBERON:0000117!4.71e-07!14;UBERON:0000171!4.71e-07!14;UBERON:0000170!4.71e-07!14;UBERON:0005597!4.71e-07!14;UBERON:0000118!4.71e-07!14;UBERON:0002329!6.83e-07!11;UBERON:0003077!6.83e-07!11;UBERON:0003059!6.83e-07!11;UBERON:0007282!6.83e-07!11;UBERON:0009618!6.83e-07!11;UBERON:0007285!6.83e-07!11;UBERON:0001134!8.65e-07!9;UBERON:0002036!8.65e-07!9;UBERON:0002385!8.65e-07!9;UBERON:0000486!8.65e-07!9;UBERON:0001015!8.65e-07!9;UBERON:0004290!8.65e-07!9;UBERON:0003082!8.65e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,7.05e-09,17;UBERON:0005181,7.05e-09,17;UBERON:0002224,7.05e-09,17;UBERON:0000915,7.05e-09,17;UBERON:0008947,7.05e-09,17;UBERON:0003258,7.05e-09,17;UBERON:0002048,4.70e-07,14;UBERON:0000117,4.70e-07,14;UBERON:0000171,4.70e-07,14;UBERON:0000170,4.70e-07,14;UBERON:0005597,4.70e-07,14;UBERON:0000118,4.70e-07,14;UBERON:0002100,5.34e-07,90;UBERON:0007524,6.83e-07,11;UBERON:0003077,6.83e-07,11;UBERON:0007285,6.83e-07,11;UBERON:0001134,8.65e-07,9;UBERON:0002036,8.65e-07,9;UBERON:0002385,8.65e-07,9;UBERON:0000486,8.65e-07,9;UBERON:0007503,8.65e-07,9;UBERON:0001015,8.65e-07,9;UBERON:0002329,8.65e-07,9;UBERON:0003082,8.65e-07,9;UBERON:0003059,8.65e-07,9;UBERON:0007282,8.65e-07,9;UBERON:0004290,8.65e-07,9;UBERON:0009618,8.65e-07,9 | |||
|phase1_expression=89.8435032257894,26.1731555729521,16.3799726180233,3.62957053568196,6.01074875935617,117.683369610235,103.023174502627,0.129123323441576,1.54867594366833,6.55380673701582,0.34243593645101,0.159544317990673,0,0.0874204024189974,39.3069518942482,24.7019826215588,39.1754651751762,13.4071420277251,18.5104485367747,16.1268067683251,40.8207792725135,15.1915155337354,26.6423784921714,6.39969691173627,8.48814339948529,20.0981187440257,21.9688618041128,45.8953725620944,4.56056206695297,5.29263272495855,11.7517170647311,64.7731286928824,47.3599886440119,206.02618532007,13.2871745085586,2.99222361645286,23.6836453264348,482.985501870392,275.811376616902,216.738830005152,1070.58130821645,993.831180614538,631.648969293531,1833.05766972441,1894.73484449273,4293.15853306173,54.7673941043627,1322.32257344741,1620.84465621493,1988.62900773177,347.866257739026,493.071295771852,0.167782606057736,0,4.03312558970957,1308.42149167883,420.344556390156,1473.79083972893,4.45096213891115,7.93486468908049,6.33831403506179,198.901740324581,62.2506357277798,248.822271828307,319.403835109133,269.271963564572,110.252840670773,126.407822450791,19.5973367263023,22.4109857630606,20.8221711737868,9.99778445413313,21.4242484723065,16.046294697159,19.1690942036473,21.1420320920305,0,2.68143409978894,2.30409799884365,5.40733779693795,5.39777097254217,4.68822033501084,1.95428099300967,1.12552522006336,1.98637722109853,21.5078867395777,17.6540884190888,10.8111678578674,24.6110128332848,35.9720626108299,142.323463952524,18.9293252935905,24.478968013479,0,1.94932925234301,0,51.1217689279577,671.154610312391,427.088191567116,521.175872402752,160.843185384969,1840.20168612132,517.254636604491,547.521361428065,678.699413570156,760.839676021721,712.28394302583,34.8260833143133,99.6910852041611,30.1337542301594,31.921300124969,36.2313919191448,36.2066330692012,23.8141772073144,62.6747809033307,14.2003248202533,572.50354527281,103.966937625416,369.767210715047,251.547451668221,195.886426874369,187.161847710196,123.018562403961,4.39171195517321,8.58731497935166,39.5958435573317,13.1796636956512,16.7972764678154,19.568814969252,5.69204429738326,4.11750542536764,8.04187853522332,4.69325664519146,5.11430914660661,3.1168206683934,2.92034273521964,114.671123695456,210.745408213498,8.84529654517861,58.5028359364398,64.4096192665383,38.6235535448235,46.0959052301694,67.0636439368932,108.994471640427,95.0603804513585,83.3008331335989,155.998132555626,51.5207503109493,130.10498315546,192.842432083688,203.194443960362,215.486618149838,157.758231434541,139.520288484586,29.855140022774,70.9235319186367,71.2853702707761,99.4572247884574,140.638399551606,180.819592245425,125.143132715405,136.838457168252,70.2448307338232,62.6324478322756,53.2502733478434,67.604897152704,85.2386999280337,65.6593801154787,69.7711722336155,50.8301435852515,45.9067960515543,52.9115777851432,43.8854989346416,3.78521907415429,22.5361101110633,2.31293148088659,32.2629691329524,42.4443618565116,47.3762810595295,47.2943583052082,57.8831715668993,66.935791197306,74.5684454361232,46.5038480313621,98.9840717891305,57.807098024062,62.0744192768391,51.6654830865668,46.7386092500195,61.5993442142879,63.5260661681431,33.5712184686955,45.5851565312818,96.9286526788492,100.40010462774,103.570628147512,112.497855104071,122.172989724065,92.1087323392717,81.6393384775149,67.7450429930685,2.37162101669719,158.669695536005,137.984414569468,106.359779158036,128.207596717534,123.482705793237,144.882109663628,198.222638703609,173.160422195738,93.9000033103239,37.3797336971122,75.9167533243747,30.5796919652269,6.56705082662491,5.74071723270119,3.85954817090694,189.556773110936,206.924621653369,421.427429079079,385.660834881227,303.219800788745,234.006241646217,179.484905228054,431.830762709309,340.17664098116,347.699562748577,269.797468568468,133.548601493326,132.622066073008,153.183353037821,3.01582567878545,8.70249094109935,23.1129208318947,84.9885178618576,7.06422595946285,4.57125577709592,340.165011656602,92.6568302840049,183.941291919678,236.605879043763,56.6563536037261,34.65047570312,31.1918143715352,15.8522857241746,281.343437664052,328.203328434403,226.499896763358,6.74774764485795,356.411553957962,110.044543066364,150.833324361411,187.900970065718,26.5490276679926,39.573243693262,33.8602383800521,33.7603092763058,66.7382277910547,79.3182681695333,140.326563190344,66.890206223861,73.0819625688679,48.9856974800515,57.9802347162493,38.1601510018291,23.1498931912576,99.9339071873772,58.7288424373705,51.6552254426137,41.1429342050075,71.3475270408282,67.958745508676,81.9010713118272,49.9850738175703,60.3721401961888,54.2499859215206,114.925718300212,144.833590746227,69.0582990427385,84.9931089302332,108.989557430721,58.0046864893403,6.86073617438886,115.508715419348,172.126647881328,200.750867668767,180.268613353489,65.7499235338131,59.9398813801089,44.3643702283962,48.703105408633,78.3593851471083,22.9120948323627,50.6137589729817,124.024874947378,131.766515802598,123.153006352522,101.32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| |||
|short_description=p1@Thbs1 | |||
}} |
Latest revision as of 13:37, 25 September 2015
Short description: | p1@Thbs1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Thbs1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1182 |
Association with transcript: | 3bp_to_ENSMUST00000039559_5end |
EntrezGene: | Thbs1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 8.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 7.05e-09 | 17 |
thoracic segment organ | 7.05e-09 | 17 |
thoracic cavity | 7.05e-09 | 17 |
thoracic segment of trunk | 7.05e-09 | 17 |
respiratory primordium | 7.05e-09 | 17 |
endoderm of foregut | 7.05e-09 | 17 |
lung | 4.70e-07 | 14 |
respiratory tube | 4.70e-07 | 14 |
respiration organ | 4.70e-07 | 14 |
pair of lungs | 4.70e-07 | 14 |
lung primordium | 4.70e-07 | 14 |
lung bud | 4.70e-07 | 14 |
trunk | 5.34e-07 | 90 |
dense mesenchyme tissue | 6.83e-07 | 11 |
paraxial mesoderm | 6.83e-07 | 11 |
presumptive paraxial mesoderm | 6.83e-07 | 11 |
skeletal muscle tissue | 8.65e-07 | 9 |
striated muscle tissue | 8.65e-07 | 9 |
muscle tissue | 8.65e-07 | 9 |
multilaminar epithelium | 8.65e-07 | 9 |
epithelial vesicle | 8.65e-07 | 9 |
musculature | 8.65e-07 | 9 |
somite | 8.65e-07 | 9 |
myotome | 8.65e-07 | 9 |
presomitic mesoderm | 8.65e-07 | 9 |
presumptive segmental plate | 8.65e-07 | 9 |
dermomyotome | 8.65e-07 | 9 |
trunk paraxial mesoderm | 8.65e-07 | 9 |