FFCP PHASE1:Mm9::chr16:44333123..44333139,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:44333123..44333139,- to FFCP PHASE1:Mm9::chr16:44333123..44333139,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=320007 | |EntrezGene=320007 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_uc007zhe.1_5end | |||
|cluster_id=chr16:44333123..44333139,- | |||
|description=CAGE_peak_5_at_Sidt1_5end | |||
|id=chr16:44333123..44333139,- | |||
|ontology_enrichment_celltype=CL:0000791!1.30e-08!9;CL:0000789!1.30e-08!9;CL:0002420!1.30e-08!9;CL:0002419!1.30e-08!9;CL:0000790!1.30e-08!9;CL:0000624!1.15e-07!8;CL:0000838!4.70e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.23e-10,9;CL:0000789,1.23e-10,9;CL:0002420,1.23e-10,9;CL:0002419,1.23e-10,9;CL:0000790,1.23e-10,9;CL:0000838,4.59e-10,12;CL:0000542,3.33e-09,13;CL:0000051,3.33e-09,13;CL:0000084,1.49e-08,11;CL:0000827,1.49e-08,11;CL:0000624,1.97e-08,8;CL:0002031,2.50e-08,25;CL:0000738,8.86e-07,17;CL:0002087,8.86e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.15e-09!10;UBERON:0000411!1.15e-09!10;UBERON:0001950!1.15e-09!10;UBERON:0000064!1.29e-09!99;UBERON:0007811!4.48e-08!86;UBERON:0007023!6.15e-08!51;UBERON:0000153!2.72e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.99e-20,10;UBERON:0000411,3.99e-20,10;UBERON:0001950,3.99e-20,10;UBERON:0002619,1.28e-13,17;UBERON:0000956,6.34e-13,21;UBERON:0001869,6.34e-13,21;UBERON:0000203,6.34e-13,21;UBERON:0003528,1.03e-08,29;UBERON:0002791,1.03e-08,29;UBERON:0001893,1.03e-08,29;UBERON:0007023,1.88e-07,51;UBERON:0002020,4.22e-07,34 | |||
|phase1_expression=0,0,0,0,0,0.839396359559449,0.934450562382103,6.19791952519566,0.985521055061667,2.10658073689794,0.68487187290202,0.957265907944037,3.25281386869291,6.8187913886818,0.333109761815663,0.404950534779652,0,1.26184866143295,1.64537320326887,1.27316895539409,0.935476191661768,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,1.14014051673824,1.51218077855958,0.665191531965914,0,0,0,0,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,6.5282592781021,14.452033363126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0.742210695324124,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0,0,0,0,1.17112318804619,2.09446706813455,2.29911349687732,0,0,0,0,0,0,2.25971616249959,2.30143911597297,0,0.486723789203273,0,0,0,1.47309299120532,0,0,0,0,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,1.68231958851302,0.308713837137853,0.660837565967596,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.863424909329478,0.144649058581512,0,0,0,1.37968373152366,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0.661585194164886,0,0,0.120625849856312,0,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.27338845544205,1.14389086603261,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,2.46268449254406,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.673482891482306,0.701261413089414,0.453460767230423,0,0,0,1.15913756419314,0,0.549454872801795,0,0.501572104035363,3.3885110557024,3.68260189205742,3.43737308063638,1.89038500578056,0.685082519770642,2.2661816921691,2.70009000092722,2.2516060161211,5.43770890781046,4.14208249401456,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.839396359559449,0.934450562382103,6.19791952519566,0.985521055061667,2.10658073689794,0.68487187290202,0.957265907944037,3.25281386869291,6.8187913886818,0.333109761815663,0.404950534779652,0,1.26184866143295,1.64537320326887,1.27316895539409,0.935476191661768,0,0,0.47997726838022,0.22940928106717,0,0,0.215471232685889,1.14014051673824,1.51218077855958,0.665191531965914,0,0,0,0,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,6.5282592781021,14.452033363126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.662605622854841,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,2.07150306917737,0.742210695324124,0.173485326766136,0,0.230615497256059,0.301445281105245,0.117588707135705,0.628332956648377,0,0.144599356919912,0,0,0,0,0,1.17112318804619,2.09446706813455,2.29911349687732,0,0,0,0,0,0,2.25971616249959,2.30143911597297,0,0.486723789203273,0,0,0,1.47309299120532,0,0,0,0,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,1.68231958851302,0.308713837137853,0.660837565967596,0.528901133327089,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.397912944082302,0.19496408711912,0,1.94524244887225,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,1.47802552133284,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.863424909329478,0.144649058581512,0,0,0,1.37968373152366,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0.661585194164886,0,0,0.120625849856312,0,0.328281799490123,0.291480836629851,0.18542530201051,0.512612642393558,0,0,0.188368457004691,0.27338845544205,1.14389086603261,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,2.46268449254406,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0.39736270956253,0.360586348559907,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0.673482891482306,0.701261413089414,0.453460767230423,0,0,0,1.15913756419314,0,0.549454872801795,0,0.501572104035363,3.3885110557024,3.68260189205742,3.43737308063638,1.89038500578056,0.685082519770642,2.2661816921691,2.70009000092722,2.2516060161211,5.43770890781046,4.14208249401456,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p5@Sidt1 | |||
}} | }} |
Latest revision as of 13:54, 25 September 2015
Short description: | p5@Sidt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sidt1_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_uc007zhe.1_5end |
EntrezGene: | Sidt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.23e-10 | 9 |
alpha-beta T cell | 1.23e-10 | 9 |
immature T cell | 1.23e-10 | 9 |
mature T cell | 1.23e-10 | 9 |
immature alpha-beta T cell | 1.23e-10 | 9 |
lymphoid lineage restricted progenitor cell | 4.59e-10 | 12 |
lymphocyte | 3.33e-09 | 13 |
common lymphoid progenitor | 3.33e-09 | 13 |
T cell | 1.49e-08 | 11 |
pro-T cell | 1.49e-08 | 11 |
CD4-positive, alpha-beta T cell | 1.97e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 2.50e-08 | 25 |
leukocyte | 8.86e-07 | 17 |
nongranular leukocyte | 8.86e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.99e-20 | 10 |
visual cortex | 3.99e-20 | 10 |
neocortex | 3.99e-20 | 10 |
regional part of cerebral cortex | 1.28e-13 | 17 |
cerebral cortex | 6.34e-13 | 21 |
cerebral hemisphere | 6.34e-13 | 21 |
pallium | 6.34e-13 | 21 |
brain grey matter | 1.03e-08 | 29 |
regional part of telencephalon | 1.03e-08 | 29 |
telencephalon | 1.03e-08 | 29 |
adult organism | 1.88e-07 | 51 |
gray matter | 4.22e-07 | 34 |