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FFCP PHASE1:Mm9::chr2:119114461..119114507,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228545
|EntrezGene=228545
|HGNC=
|HGNC=
|MCL_coexpression_id=247
|TSSclassifier=NA
|UniProt=Q8R307,E9PWR0,E9Q0R7,A2AV60,Q8BLK7
|UniProt=Q8R307,E9PWR0,E9Q0R7,A2AV60,Q8BLK7
|association_with_transcript=0bp_to_ENSMUST00000037280,ENSMUST00000139367,ENSMUST00000170824,ENSMUST00000171090,NM_172269,uc008ltn.2,uc008lto.2_5end
|association_with_transcript=0bp_to_ENSMUST00000037280,ENSMUST00000139367,ENSMUST00000170824,ENSMUST00000171090,NM_172269,uc008ltn.2,uc008lto.2_5end
|cluster_id=chr2:119114461..119114507,+
|description=CAGE_peak_1_at_Vps18_5end
|description=CAGE_peak_1_at_Vps18_5end
|id=chr2:119114461..119114507,+
|id=chr2:119114461..119114507,+
|ontology_enrichment_celltype=CL:0000055!3.50e-13!50;CL:0000221!3.08e-12!44;CL:0000133!3.08e-12!44;CL:0002319!3.61e-12!43;CL:0000117!2.09e-10!23;CL:0000337!2.09e-10!23;CL:0000393!4.85e-09!39;CL:0000211!4.85e-09!39;CL:0000540!5.92e-08!33;CL:0000047!5.92e-08!33;CL:0000031!5.92e-08!33;CL:0000404!5.92e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000221,3.08e-12,44;CL:0000133,3.08e-12,44;CL:0002319,3.61e-12,43;CL:0000117,2.09e-10,23;CL:0000337,2.09e-10,23;CL:0000393,4.85e-09,39;CL:0000211,4.85e-09,39;CL:0000540,5.92e-08,33;CL:0000047,5.92e-08,33;CL:0000031,5.92e-08,33;CL:0000404,5.92e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.05e-24!75;UBERON:0001016!3.05e-24!75;UBERON:0001017!2.58e-23!73;UBERON:0005743!2.58e-23!73;UBERON:0004121!1.07e-21!102;UBERON:0000924!1.07e-21!102;UBERON:0006601!1.07e-21!102;UBERON:0001049!2.70e-19!52;UBERON:0005068!2.70e-19!52;UBERON:0006241!2.70e-19!52;UBERON:0007135!2.70e-19!52;UBERON:0000955!6.84e-19!50;UBERON:0006238!6.84e-19!50;UBERON:0002616!2.22e-18!49;UBERON:0002346!5.05e-18!71;UBERON:0003075!5.05e-18!71;UBERON:0007284!5.05e-18!71;UBERON:0000033!5.66e-16!63;UBERON:0002020!1.24e-13!34;UBERON:0003080!2.40e-13!40;UBERON:0002780!7.54e-13!39;UBERON:0001890!7.54e-13!39;UBERON:0006240!7.54e-13!39;UBERON:0003056!3.42e-12!49;UBERON:0002791!1.50e-11!29;UBERON:0003528!1.50e-11!29;UBERON:0001893!1.50e-11!29;UBERON:0000956!1.14e-08!21;UBERON:0001869!1.14e-08!21;UBERON:0000203!1.14e-08!21;UBERON:0002619!9.50e-08!17;UBERON:0000025!2.05e-07!114;UBERON:0004111!2.63e-07!122;UBERON:0003076!7.15e-07!12;UBERON:0003057!7.15e-07!12;UBERON:0000153!8.29e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.05e-24,75;UBERON:0001017,2.58e-23,73;UBERON:0000073,1.15e-20,54;UBERON:0004121,2.09e-20,95;UBERON:0000924,2.09e-20,95;UBERON:0006601,2.09e-20,95;UBERON:0001049,2.70e-19,52;UBERON:0005068,2.70e-19,52;UBERON:0006241,2.70e-19,52;UBERON:0007135,2.70e-19,52;UBERON:0002346,4.98e-17,64;UBERON:0003075,4.98e-17,64;UBERON:0007284,4.98e-17,64;UBERON:0000955,5.82e-17,47;UBERON:0006238,5.82e-17,47;UBERON:0002616,1.83e-16,46;UBERON:0010371,1.53e-14,73;UBERON:0002020,1.24e-13,34;UBERON:0003080,2.40e-13,40;UBERON:0002780,7.54e-13,39;UBERON:0001890,7.54e-13,39;UBERON:0006240,7.54e-13,39;UBERON:0010314,8.75e-13,92;UBERON:0003056,3.42e-12,49;UBERON:0003528,1.50e-11,29;UBERON:0002791,1.50e-11,29;UBERON:0001893,1.50e-11,29;UBERON:0000956,1.14e-08,21;UBERON:0001869,1.14e-08,21;UBERON:0000203,1.14e-08,21;UBERON:0002619,9.50e-08,17;UBERON:0000025,2.05e-07,114;UBERON:0004111,2.63e-07,122;UBERON:0003076,7.15e-07,12;UBERON:0003057,7.15e-07,12
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1415178489297,7.28267470478032,8.76126630688561,6.28214260761671,8.81381818384192,6.83473244395618,3.94585057078933,7.7748603942869,9.76205093696876,7.58359634541786,9.5578269373521,9.46154302748358,11.1489376713466,8.20287624516886,9.96163772044253,10.6297013163443,8.92893019399383,7.2682557744481,10.5417111950885,8.83314231617514,6.23619950293416,5.01274747868948,7.54989148168807,5.64918612743854,6.20296014133224,7.26958439626663,6.47757856567499,7.4611377001262,5.65255708290564,5.67649865677944,9.23327527234395,6.12172035761071,9.76738194845885,6.9976808155391,8.73000005093208,10.6254276717705,7.69498149349846,9.34073283763052,9.86094543763703,12.5393026008841,13.5540442228096,11.0478056761722,14.3223878359849,12.3734291287455,11.6464028361009,16.6186657425734,16.8755625057951,16.2115633160719,16.3131267234314,15.5328093525546,7.78405106881325,5.58634822761443,7.85374586469017,5.59145449257076,3.98265008993166,5.69914876195044,8.22312892865976,6.79915688888351,6.4183841918363,4.80124702351215,5.0695859978048,5.65879024158229,7.58496210506047,6.33849008808206,6.37533705407307,2.85776214769844,6.72129090480162,6.17309505483856,4.53294490883637,6.91834924631667,4.11443102862498,4.79184676630211,5.24559617884106,4.65108533223451,6.58765662907314,6.59993941555077,5.67076715905595,8.41823076601097,5.83957689537206,2.80571135828869,5.69448086996036,5.31924204828043,6.13846564754534,5.88759996506671,7.52335782826451,11.7410971630835,8.4215379040347,7.73535794573874,9.75570493551101,10.1472052794977,6.4922993973718
|phase1_expression=7.68714466103011,9.77131141390211,6.3699893514535,3.32710632437513,3.50627010962443,6.37941233265181,7.47560449905682,6.97265946584512,2.111830832275,1.17032263160997,5.82141091966717,5.10541817570153,7.19043065711064,6.38168937658681,3.99731714178795,3.84703008040669,6.29605690315332,12.9339487796877,11.2433835556706,13.1560792057389,7.313722952992,13.9007331681239,11.7539905112521,8.31960598525715,7.79991555628378,5.16808767703518,5.59990595006797,4.95583835177545,6.65081968097309,5.29263272495855,6.65191531965914,10.1604907753541,9.84103660135312,0,1.44425809875637,2.99222361645286,2.45003227514843,20.5080499061085,4.6880120671428,22.5115209908733,22.3527965451785,15.0270006690858,20.3914348273085,10.4494358919729,11.4555932278051,11.3798986340243,22.6893489860931,11.9913836009246,11.643367684927,13.8045228342741,11.0589273084036,20.125359011096,17.9527388481778,7.25362142011344,9.07453257684653,10.5476368774738,11.1748041576115,9.7977697532714,19.8270131642406,14.2827564403449,15.8457850876545,16.6033820713875,13.3394219416671,55.343832612806,55.3765163037506,56.838409195688,32.6564120465061,24.5899715405795,11.509546966241,10.6654691282036,11.3575479129746,16.5677570954206,15.6816664075646,9.30930074033651,17.9231030804102,17.4651569455904,22.0231761998777,19.4084753889485,24.2698322544865,12.7929699098288,16.8337264228434,8.33461392890816,22.6138229191119,21.9477417912355,22.6141406709679,12.0797720044204,15.0913981647049,11.7431650869939,13.176357639974,13.5273092591146,7.24661221754194,8.60423876981386,7.47968467078526,11.873470216032,9.09686984426737,2.68816132258401,7.02222100658759,8.52151612890289,7.79358013808606,12.7202246823722,9.85903938436764,6.41632387071589,0,0,6.061749148314,8.61423542615335,3.53867111510348,5.36664234679582,8.54495016035667,8.31275978763019,9.88866362566974,8.52503339273995,13.3756988408514,10.7013074792362,11.4061045921634,11.3099932196708,15.5732829672656,4.916378135277,7.07688441559899,6.47067399789637,9.49618529379692,7.27312879702833,5.59175283654366,18.1524094147159,19.8974371472782,5.8755122697976,7.0690923458493,6.59893004092748,9.27612657633372,15.8778077769112,12.3525162761029,11.1832373380449,12.6891753740362,18.4115129277838,14.7529511637288,14.9261962022337,9.06370338267815,8.58408097209642,6.31806896084187,9.6803253707778,9.62891277924007,8.5063778640385,7.56260945182467,6.78171680260718,10.2735113718505,12.1708034270607,11.2442069471675,5.95017752699736,9.91612767491074,8.13156144721623,11.2608719464927,9.20622076195814,5.28289773528636,11.8405736617537,10.0833246839892,6.96619933864726,2.80885274925294,5.91900186363845,7.95657798307659,6.21377317606506,6.56672967947069,7.92273070428465,8.99629995223799,6.49321964766433,6.01641740260775,8.60375595576509,5.90201483079162,6.889155199663,5.26591519723137,7.05920095540109,6.4044359541226,9.35679919522127,8.12335426576887,8.85762363818454,14.2997165023607,13.8921226712034,8.26046957459495,7.1401652999157,9.17139477301506,9.0572302025571,6.44337306610467,9.07575860805041,9.11749979763968,13.6962450801043,10.9141684155238,9.88193728344065,11.8127548136127,13.7279965708394,9.94316844307513,9.88701349519644,8.42938394511308,7.96565093017469,6.82804443431094,8.79713547094912,11.270773567308,6.92414514674068,5.43066964069352,9.25792822552205,9.67519018001136,6.4948465111025,8.32093257559286,7.89741849099523,8.59712618552732,4.50481785433454,5.11053387294328,6.07127703439105,4.46292267054706,5.06472035480075,5.60176873919124,6.04161888646702,9.07957269940198,7.68771956926628,8.62609239164127,6.32639611036456,7.48890415474945,8.5876818502018,5.74071723270119,10.6137574699941,7.944387177164,7.39016505904891,9.4519686336375,8.48725428875941,8.44884893838608,8.20780661464897,8.33152743101048,9.75668239288994,10.5615546551148,7.0868700687608,10.2051051940792,8.02930242107116,10.3610989119537,10.5593812764503,42.2215595029962,29.3709069262103,11.8023425524569,9.3818493743609,13.6468001489623,17.2301179290539,5.08198330667694,7.32165688892682,8.51872192423893,7.41833614163613,7.75524231838076,10.2756583119597,10.2487390077901,7.07691326972081,8.09621403349789,7.3063964477828,10.2774822266096,15.4234231882467,6.95506417520516,9.25941139069727,10.2618784392753,7.25868541079156,9.2921596837974,8.25454162926937,6.65111825322452,5.28094223316515,11.5167738223501,7.07100840271033,7.75284879504663,7.27067458955011,7.84294232446387,4.42451461110142,8.4334886859999,6.18813259489121,9.87274856685985,8.64293251350289,9.70190128370659,8.57348140126369,9.04435191575595,12.664186049747,10.86023535974,13.3964577610424,10.560226862867,11.6507638975101,7.05690873775878,3.95727007059552,7.42736362801165,5.66941494324665,6.2073618881631,8.69946768648825,7.28702091574627,17.9862542950194,5.98048082792484,8.46186158649212,5.37064129372164,5.27431679613135,7.79157098009843,5.94823250336959,9.34881364966204,9.51669875800874,11.0559979043539,1.90934123603023,6.64305586520384,7.31950081656655,7.66837919834789,3.76358932826044,6.11415178489297,7.28267470478032,8.76126630688561,6.28214260761671,8.81381818384192,6.83473244395618,3.94585057078933,7.7748603942869,9.76205093696876,7.58359634541786,9.5578269373521,9.46154302748358,11.1489376713466,8.20287624516886,9.96163772044253,10.6297013163443,8.92893019399383,7.2682557744481,10.5417111950885,8.83314231617514,6.23619950293416,5.01274747868948,7.54989148168807,5.64918612743854,6.20296014133224,7.26958439626663,6.47757856567499,7.4611377001262,5.65255708290564,5.67649865677944,9.23327527234395,6.12172035761071,9.76738194845885,6.9976808155391,8.73000005093208,10.6254276717705,7.69498149349846,9.34073283763052,9.86094543763703,12.5393026008841,13.5540442228096,11.0478056761722,14.3223878359849,12.3734291287455,11.6464028361009,16.6186657425734,16.8755625057951,16.2115633160719,16.3131267234314,15.5328093525546,7.78405106881325,5.58634822761443,7.85374586469017,5.59145449257076,3.98265008993166,5.69914876195044,8.22312892865976,6.79915688888351,6.4183841918363,4.80124702351215,5.0695859978048,5.65879024158229,7.58496210506047,6.33849008808206,6.37533705407307,2.85776214769844,6.72129090480162,6.17309505483856,4.53294490883637,6.91834924631667,4.11443102862498,4.79184676630211,5.24559617884106,4.65108533223451,6.58765662907314,6.59993941555077,5.67076715905595,8.41823076601097,5.83957689537206,2.80571135828869,5.69448086996036,5.31924204828043,6.13846564754534,5.88759996506671,7.52335782826451,11.7410971630835,8.4215379040347,7.73535794573874,9.75570493551101,10.1472052794977,6.4922993973718
|short_description=p1@Vps18
|short_description=p1@Vps18
}}
}}

Latest revision as of 14:06, 25 September 2015

Short description:p1@Vps18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vps18_5end
Coexpression cluster:MCL_coexpression_mm9:247
Association with transcript: 0bp_to_ENSMUST00000037280, ENSMUST00000139367, ENSMUST00000170824, ENSMUST00000171090, NM_172269, uc008ltn.2, uc008lto.2_5end
EntrezGene:Vps18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vps18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.38
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.16
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.80
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.65
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G820.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H322.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H215.03
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.46
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A217.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.55
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.60
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C755.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E755.38
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D256.84
Mouse Microglia, donor1.CNhs12629.11718-123C832.66
Mouse Microglia, donor2.CNhs12634.11736-123E824.59
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.51
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.68
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F319.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.61
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.74
Mouse Schwann, donor1.CNhs12507.11728-123D913.18
Mouse Schwann, donor2.CNhs12573.11746-123F913.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.25
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.37
accessory axillary lymph node, adult.CNhs10475.1063-29H98.54
adrenal gland, adult.CNhs10508.49-24D78.31
adrenal gland, embryo E14.CNhs11038.406-44C59.89
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I113.38
adrenal gland, embryo E18.CNhs11026.1262-18F510.70
adrenal gland, neonate N00.CNhs11191.1311-23C111.41
adrenal gland, neonate N25.CNhs11223.1377-27I311.31
amnion, adult pregnant day17.5.CNhs10488.583-22A815.57
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A69.50
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.28
corpora quadrigemina, adult.CNhs10501.16-22A415.88
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F111.18
cortex, adult.CNhs10473.12-14D512.69
cortex, neonate N30.CNhs11107.1392-42F218.41
diencephalon, adult.CNhs10482.20-12F214.75
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.58
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E28.51
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D46.78
eyeball, neonate N00.CNhs11207.633-15C610.27
eyeball, neonate N01.CNhs11140.1532-43E712.17
eyeball, neonate N02.CNhs11205.1551-44G811.24
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E29.92
forelimb, embryo E12.CNhs10600.359-14H28.13
forelimb, embryo E13.CNhs10589.384-1E211.26
forelimb, embryo E14.CNhs10577.413-26A89.21
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C66.02
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E36.89
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G16.40
heart, neonate N20.CNhs11127.821-26I69.36
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D28.86
hippocampus, adult.CNhs10478.13-16E814.30
hippocampus, neonate N00.CNhs11228.627-43G113.89
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D59.06
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F713.70
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E99.88
intestine, neonate N06.CNhs11102.688-20B811.81
intestine, neonate N07.CNhs11095.720-20F213.73
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F88.80
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G79.26
kidney, neonate N10.CNhs11206.758-6D59.68
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F38.32
kidney, neonate N30.CNhs11203.1385-42H17.90
liver, adult pregnant day01.CNhs10466.508-5B28.60
liver, embryo E12.CNhs10601.355-15F84.50
liver, embryo E13.CNhs10524.378-3H65.11
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F49.08
liver, neonate N03.CNhs11123.1345-25G27.69
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A38.59
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C58.49
lung, embryo E16.CNhs10998.458-17B68.45
lung, embryo E17.CNhs10605.480-44A68.21
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E610.21
lung, neonate N20.CNhs11109.822-18A48.03
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H210.56
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A129.37
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C213.65
medulla oblongata, neonate N30.CNhs11200.1396-42A317.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.32
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.31
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I915.42
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I410.26
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F48.25
pancreas, embryo E15.CNhs11042.1556-45F26.65
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G97.75
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C79.70
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B99.04
pituitary gland, embryo E16.CNhs11036.449-43F612.66
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G311.65
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H35.67
skin, neonate N06.CNhs11097.693-20I56.21
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C917.99
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C18.46
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D15.27
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.06
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D47.67
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B87.28
stomach, neonate N07.CNhs11210.718-18A98.76
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I18.81
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F57.77
testis, embryo E15.CNhs11034.443-27C59.76
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I59.56
testis, embryo E18.CNhs11027.503-18G59.46
testis, neonate N00.CNhs11189.1300-22B711.15
testis, neonate N07.CNhs11222.726-26I48.20
testis, neonate N10.CNhs11204.763-44D99.96
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B57.27
thymus, embryo E14.CNhs11041.402-44I410.54
thymus, embryo E15.CNhs11005.430-45I28.83
thymus, embryo E16.CNhs11002.456-26C56.24
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C47.27
thymus, neonate N07.CNhs11211.713-19D36.48
thymus, neonate N10.CNhs11194.748-24E47.46
thymus, neonate N20.CNhs11186.820-7A25.65
thymus, neonate N25.CNhs11125.1362-25G75.68
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.73
urinary bladder, adult.CNhs10481.879-12E410.63
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A113.55
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A516.62
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I87.78
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F25.70
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.66
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B38.42
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C69.76
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.08e-1244
neurectodermal cell3.08e-1244
neural cell3.61e-1243
CNS neuron (sensu Vertebrata)2.09e-1023
neuroblast (sensu Vertebrata)2.09e-1023
electrically responsive cell4.85e-0939
electrically active cell4.85e-0939
neuron5.92e-0833
neuronal stem cell5.92e-0833
neuroblast5.92e-0833
electrically signaling cell5.92e-0833

Uber anatomy
Ontology termp-valuen
nervous system3.05e-2475
central nervous system2.58e-2373
regional part of nervous system1.15e-2054
ectoderm-derived structure2.09e-2095
ectoderm2.09e-2095
presumptive ectoderm2.09e-2095
neural tube2.70e-1952
neural rod2.70e-1952
future spinal cord2.70e-1952
neural keel2.70e-1952
neurectoderm4.98e-1764
neural plate4.98e-1764
presumptive neural plate4.98e-1764
brain5.82e-1747
future brain5.82e-1747
regional part of brain1.83e-1646
ecto-epithelium1.53e-1473
gray matter1.24e-1334
anterior neural tube2.40e-1340
regional part of forebrain7.54e-1339
forebrain7.54e-1339
future forebrain7.54e-1339
structure with developmental contribution from neural crest8.75e-1392
pre-chordal neural plate3.42e-1249
brain grey matter1.50e-1129
regional part of telencephalon1.50e-1129
telencephalon1.50e-1129
cerebral cortex1.14e-0821
cerebral hemisphere1.14e-0821
pallium1.14e-0821
regional part of cerebral cortex9.50e-0817
tube2.05e-07114
anatomical conduit2.63e-07122
posterior neural tube7.15e-0712
chordal neural plate7.15e-0712
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