FFCP PHASE1:Mm9::chr5:137384051..137384072,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67286 | |EntrezGene=67286 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt=Q9DAI2 | |UniProt=Q9DAI2 | ||
|association_with_transcript=31bp_to_ENSMUST00000008131,NM_026073,uc009abc.1_5end | |association_with_transcript=31bp_to_ENSMUST00000008131,NM_026073,uc009abc.1_5end | ||
|cluster_id=chr5:137384051..137384072,+ | |||
|description=CAGE_peak_2_at_Rabl5_5end | |description=CAGE_peak_2_at_Rabl5_5end | ||
|id=chr5:137384051..137384072,+ | |id=chr5:137384051..137384072,+ | ||
|ontology_enrichment_celltype=CL:0000221!4.10e-17!44;CL:0000133!4.10e-17!44;CL:0002319!5.66e-17!43;CL:0000540!1.19e-13!33;CL:0000047!1.19e-13!33;CL:0000031!1.19e-13!33;CL:0000404!1.19e-13!33;CL:0000055!1.83e-13!50;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!4.17e-11!39;CL:0000211!4.17e-11!39 | |ontology_enrichment_celltype=CL:0000221!4.10e-17!44;CL:0000133!4.10e-17!44;CL:0002319!5.66e-17!43;CL:0000540!1.19e-13!33;CL:0000047!1.19e-13!33;CL:0000031!1.19e-13!33;CL:0000404!1.19e-13!33;CL:0000055!1.83e-13!50;CL:0000117!1.18e-12!23;CL:0000337!1.18e-12!23;CL:0000393!4.17e-11!39;CL:0000211!4.17e-11!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.96e-18,44;CL:0000133,5.96e-18,44;CL:0002319,8.46e-18,43;CL:0000540,1.52e-14,33;CL:0000047,1.52e-14,33;CL:0000031,1.52e-14,33;CL:0000404,1.52e-14,33;CL:0000117,1.78e-13,23;CL:0000337,1.78e-13,23;CL:0000393,1.01e-11,39;CL:0000211,1.01e-11,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.38e-30!73;UBERON:0005743!2.38e-30!73;UBERON:0000073!2.19e-29!75;UBERON:0001016!2.19e-29!75;UBERON:0002346!1.15e-24!71;UBERON:0003075!1.15e-24!71;UBERON:0007284!1.15e-24!71;UBERON:0004121!4.78e-24!102;UBERON:0000924!4.78e-24!102;UBERON:0006601!4.78e-24!102;UBERON:0000033!2.20e-23!63;UBERON:0001049!5.16e-23!52;UBERON:0005068!5.16e-23!52;UBERON:0006241!5.16e-23!52;UBERON:0007135!5.16e-23!52;UBERON:0002616!4.45e-21!49;UBERON:0000955!6.24e-21!50;UBERON:0006238!6.24e-21!50;UBERON:0003056!7.73e-21!49;UBERON:0003080!2.93e-17!40;UBERON:0002780!5.90e-17!39;UBERON:0001890!5.90e-17!39;UBERON:0006240!5.90e-17!39;UBERON:0002020!1.67e-16!34;UBERON:0000153!3.82e-14!94;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0007811!2.18e-13!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0002619!2.67e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!2.38e-30!73;UBERON:0005743!2.38e-30!73;UBERON:0000073!2.19e-29!75;UBERON:0001016!2.19e-29!75;UBERON:0002346!1.15e-24!71;UBERON:0003075!1.15e-24!71;UBERON:0007284!1.15e-24!71;UBERON:0004121!4.78e-24!102;UBERON:0000924!4.78e-24!102;UBERON:0006601!4.78e-24!102;UBERON:0000033!2.20e-23!63;UBERON:0001049!5.16e-23!52;UBERON:0005068!5.16e-23!52;UBERON:0006241!5.16e-23!52;UBERON:0007135!5.16e-23!52;UBERON:0002616!4.45e-21!49;UBERON:0000955!6.24e-21!50;UBERON:0006238!6.24e-21!50;UBERON:0003056!7.73e-21!49;UBERON:0003080!2.93e-17!40;UBERON:0002780!5.90e-17!39;UBERON:0001890!5.90e-17!39;UBERON:0006240!5.90e-17!39;UBERON:0002020!1.67e-16!34;UBERON:0000153!3.82e-14!94;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0007811!2.18e-13!86;UBERON:0000956!1.15e-09!21;UBERON:0001869!1.15e-09!21;UBERON:0000203!1.15e-09!21;UBERON:0002619!2.67e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.71e-32,73;UBERON:0001016,4.06e-31,75;UBERON:0002346,4.23e-29,64;UBERON:0003075,4.23e-29,64;UBERON:0007284,4.23e-29,64;UBERON:0004121,2.67e-27,95;UBERON:0000924,2.67e-27,95;UBERON:0006601,2.67e-27,95;UBERON:0000073,7.69e-26,54;UBERON:0001049,1.31e-24,52;UBERON:0005068,1.31e-24,52;UBERON:0006241,1.31e-24,52;UBERON:0007135,1.31e-24,52;UBERON:0010371,1.77e-23,73;UBERON:0003056,2.86e-22,49;UBERON:0002616,4.07e-21,46;UBERON:0000955,5.89e-21,47;UBERON:0006238,5.89e-21,47;UBERON:0003080,2.01e-18,40;UBERON:0002780,4.26e-18,39;UBERON:0001890,4.26e-18,39;UBERON:0006240,4.26e-18,39;UBERON:0002020,1.30e-17,34;UBERON:0010314,1.93e-16,92;UBERON:0003528,1.51e-14,29;UBERON:0002791,1.51e-14,29;UBERON:0001893,1.51e-14,29;UBERON:0000956,2.87e-10,21;UBERON:0001869,2.87e-10,21;UBERON:0000203,2.87e-10,21;UBERON:0002619,8.43e-09,17;UBERON:0003076,9.00e-07,12;UBERON:0003057,9.00e-07,12 | |||
|phase1_expression=7.04654927261093,0.697950815278722,0.454999239389536,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,1.73504190947031,1.23402990245165,2.97072756258621,11.7359740408476,0.794327609607082,1.82839852397255,0.319984845586813,1.14704640533585,0.57423196411502,0,0.430942465371778,0.190023419456374,0.504060259519861,0.665191531965914,0,0,0,0.866554859253824,0.664938581433969,0.204169356262369,0,0.7813353445238,0,0,0,0,1.1330713617802,0.912392380975631,2.56965453026354,7.04152209913235,6.5407546914134,10.1055644057857,12.2490836416799,4.05960622713551,12.9377307928474,0.335565212115473,0,0,1.02903774414379,0,1.03134418455488,10.3181395038395,8.99284664762456,8.23980824558033,5.08266798103698,7.11435836888911,0.899899717281399,1.97773272513395,2.8419204597844,4.79360176829448,19.2109152660777,4.66603255388149,4.3201900266141,6.73039876324422,9.42648248532552,8.39300455616131,5.87955836231779,5.65488279007595,9.19218786610021,5.50579404996943,6.63974158042976,4.14737639791857,13.1886287730194,16.9252140664458,11.4600941522487,5.30447698102624,6.19038871034848,5.19514042441154,6.18720029494702,7.26095572075425,10.0655700745662,0.757261933331841,1.20914496170857,0,0,0,0.539703191637817,0,0,2.24711072210803,0.852151612890289,0.259786004602869,2.82671659608272,2.81686839553361,1.28326477414318,0,0,0.432982082022428,1.26679932737549,0.505524445014783,1.48439043634778,0.517875767294343,0.148442139064825,2.25530924795977,2.13125834818499,1.15307748628029,0.904335843315735,1.29347577849275,1.13099932196708,0.494389935468748,0.722996784599558,0.884610551949874,0.808834249737046,0.662524555381181,1.45462575940567,0,4.68449275218475,6.0739544975902,1.27728527604296,2.27648736561249,2.99951365496704,1.65191295194984,4.34392854273986,4.57500602818627,5.27748278874031,4.51943232499919,5.11430914660661,3.94797284663164,4.38051410282946,1.83310854930569,1.11966273549084,0.505445516867349,1.05220927943237,8.58794923553845,10.8053989083732,9.72335500948886,8.43946979880004,7.55205140579739,5.63700369253339,6.55912071918102,2.06962696591213,7.11374376678379,3.9712276835242,3.69497360744293,2.41115305670332,2.22437799380478,1.0447564995665,2.05782136407943,4.97585667046233,3.51106593656617,2.83082697826187,1.70498099637356,1.44988040774851,1.40715635988658,1.44049649168812,0.23674473558521,0.787056926989615,1.07986979021165,0.697601834251224,0.268273401399619,0.583826711835847,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0.402619256281115,4.83666881697493,8.43817821510132,0.330418782983798,0,4.69234151177515,2.55460339046482,2.19074684247559,1.21010114774006,0.444756087689741,1.52180500890047,0,0.658795818896044,1.00534083520108,0.596869416123452,0.974820435595601,0,0.216138049874694,0,4.55202962287396,3.42745537829186,4.50830942692322,1.22190796707189,1.93952487167626,1.61312385747733,1.45444035385792,0.738050739898011,0.627994911365499,0.863780147452604,0,1.00107063429656,0.589676985339609,0,0.202860121388503,0.241177159752417,0.50925170356284,0.575392274901621,0.810676133875177,0.549122826376163,0,1.48856379067401,0,0,0,0,0.739012760666419,3.7898282354097,2.44447464663039,2.37643120085263,3.28566347603903,2.1775813467436,1.19021820443007,0.780534591431195,0.315270288212382,2.43611158613652,0.956728611944923,0.655453258862952,0.518054945597687,0.289298117163023,4.52373851817817,3.80733978673097,0.491764273019036,0,4.49541651965817,3.7507739709505,2.45902418065013,0,2.52406575533005,2.34263246577983,2.80050417052639,4.54040716109849,2.00518806674155,1.41538265394416,5.66734982344852,2.33804686329049,2.76701444562566,1.92792789853084,1.41940085208269,4.09550888434687,2.60619134965722,1.48473110675282,0,4.37005145078967,3.62788268357701,0.943025398779491,0.590603785761546,0.922305443831782,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,1.02131881726136,7.92268813737765,7.63216234318252,6.43011105094777,5.85222771019503,4.99432689285798,5.26556865926787,4.87143918583359,0.469343416127421,0,0.882113592219848,0.32977250588296,0.322928853391811,0.663442174209714,0.477489376012546,0.328281799490123,0,3.33765543618917,0.683483523191411,2.27025554759545,1.11116716421827,0.565105371014073,0.683471138605126,0.228778173206523,0.849892149969277,1.11961161858926,1.93479963326193,0,4.58687190692646,1.42323626988794,1.72808545314882,0.627264888043406,1.31017538247707,1.34864346384821,0.661227645802687,0.26175594198403,0.388844919875379,0,88.4997913734179,1.94371509857172,3.47462829959905,2.72231663681667,2.45403664607689,3.04121025883401,1.99507305697782,1.3020438484395,2.20204623293993,31.1643515865548,43.4925309449377,0.632022241256357,2.8381530140623,1.95150818613172,1.55904987573354,0.895133478337407,1.58945083825012,1.68273629327956,1.03382669022204,1.51449674922221,1.295515713135,1.61321896218945,0.584747284438515,1.05833025804362,0.935015217452552,0.453460767230423,0.221985953374065,0.62799699626633,0.671538465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| ||
|short_description=p2@Rabl5 | |short_description=p2@Rabl5 | ||
}} | }} |
Latest revision as of 14:13, 25 September 2015
Short description: | p2@Rabl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rabl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 31bp_to_ENSMUST00000008131, NM_026073, uc009abc.1_5end |
EntrezGene: | Rabl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.96e-18 | 44 |
neurectodermal cell | 5.96e-18 | 44 |
neural cell | 8.46e-18 | 43 |
neuron | 1.52e-14 | 33 |
neuronal stem cell | 1.52e-14 | 33 |
neuroblast | 1.52e-14 | 33 |
electrically signaling cell | 1.52e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.78e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.78e-13 | 23 |
electrically responsive cell | 1.01e-11 | 39 |
electrically active cell | 1.01e-11 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.71e-32 | 73 |
nervous system | 4.06e-31 | 75 |
neurectoderm | 4.23e-29 | 64 |
neural plate | 4.23e-29 | 64 |
presumptive neural plate | 4.23e-29 | 64 |
ectoderm-derived structure | 2.67e-27 | 95 |
ectoderm | 2.67e-27 | 95 |
presumptive ectoderm | 2.67e-27 | 95 |
regional part of nervous system | 7.69e-26 | 54 |
neural tube | 1.31e-24 | 52 |
neural rod | 1.31e-24 | 52 |
future spinal cord | 1.31e-24 | 52 |
neural keel | 1.31e-24 | 52 |
ecto-epithelium | 1.77e-23 | 73 |
pre-chordal neural plate | 2.86e-22 | 49 |
regional part of brain | 4.07e-21 | 46 |
brain | 5.89e-21 | 47 |
future brain | 5.89e-21 | 47 |
anterior neural tube | 2.01e-18 | 40 |
regional part of forebrain | 4.26e-18 | 39 |
forebrain | 4.26e-18 | 39 |
future forebrain | 4.26e-18 | 39 |
gray matter | 1.30e-17 | 34 |
structure with developmental contribution from neural crest | 1.93e-16 | 92 |
brain grey matter | 1.51e-14 | 29 |
regional part of telencephalon | 1.51e-14 | 29 |
telencephalon | 1.51e-14 | 29 |
cerebral cortex | 2.87e-10 | 21 |
cerebral hemisphere | 2.87e-10 | 21 |
pallium | 2.87e-10 | 21 |
regional part of cerebral cortex | 8.43e-09 | 17 |
posterior neural tube | 9.00e-07 | 12 |
chordal neural plate | 9.00e-07 | 12 |