FFCP PHASE1:Mm9::chr11:70246129..70246209,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:70246129..70246209,+
|short_description=p1@Arrb2
|description=CAGE_peak_1_at_Arrb2_5end
|association_with_transcript=0bp_to_ENSMUST00000079056,ENSMUST0000...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216869 | |EntrezGene=216869 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YI4,Q5F2D9,G3UZ54,E9Q4A2 | |UniProt=Q91YI4,Q5F2D9,G3UZ54,E9Q4A2 | ||
|association_with_transcript=0bp_to_ENSMUST00000079056,ENSMUST00000084954,ENSMUST00000102563,ENSMUST00000102564,ENSMUST00000108568,ENSMUST00000124112,ENSMUST00000124943,ENSMUST00000128748,ENSMUST00000150076,ENSMUST00000164318,ENSMUST00000167563,NM_145429,uc007jur.1,uc007jus.1,uc007jut.1,uc007juu.1_5end | |||
|cluster_id=chr11:70246129..70246209,+ | |||
|description=CAGE_peak_1_at_Arrb2_5end | |||
|id=chr11:70246129..70246209,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.27e-10!32;CL:0002032!2.27e-10!32;CL:0000037!2.27e-10!32;CL:0000566!2.27e-10!32;CL:0000837!2.27e-10!32;CL:0000723!2.02e-09!91;CL:0000048!2.02e-09!91;CL:0000034!2.37e-09!97;CL:0002031!5.82e-09!25;CL:0000117!9.04e-09!23;CL:0000337!9.04e-09!23;CL:0000049!4.54e-08!19;CL:0000763!5.29e-07!16;CL:0002320!6.07e-07!46;CL:0000134!6.07e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.27e-10,32;CL:0002032,2.27e-10,32;CL:0000037,2.27e-10,32;CL:0000837,2.27e-10,32;CL:0000723,2.02e-09,91;CL:0000048,2.02e-09,91;CL:0000034,2.37e-09,97;CL:0002031,5.82e-09,25;CL:0000117,9.04e-09,23;CL:0000337,9.04e-09,23;CL:0000049,4.54e-08,19;CL:0000763,5.29e-07,16;CL:0002320,6.07e-07,46;CL:0000134,6.07e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.96e-15!70;UBERON:0002390!1.73e-13!45;UBERON:0003061!1.73e-13!45;UBERON:0002193!7.23e-13!48;UBERON:0005057!5.03e-09!51;UBERON:0002371!1.88e-07!16;UBERON:0004177!2.62e-07!29;UBERON:0002384!6.07e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.72e-13,45;UBERON:0003061,1.72e-13,45;UBERON:0002193,7.20e-13,48;UBERON:0002405,7.20e-13,48;UBERON:0002371,1.88e-07,16;UBERON:0004177,2.61e-07,29;UBERON:0005057,2.61e-07,29;UBERON:0002384,6.07e-07,46 | |||
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| 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| ||
|short_description=p1@Arrb2 | |||
}} | }} |
Latest revision as of 14:30, 25 September 2015
Short description: | p1@Arrb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arrb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000079056, ENSMUST00000084954, ENSMUST00000102563, ENSMUST00000102564, ENSMUST00000108568, ENSMUST00000124112, ENSMUST00000124943, ENSMUST00000128748, ENSMUST00000150076, ENSMUST00000164318, ENSMUST00000167563, NM_145429, uc007jur.1, uc007jus.1, uc007jut.1, uc007juu.1_5end |
EntrezGene: | Arrb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.27e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.27e-10 | 32 |
hematopoietic stem cell | 2.27e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.27e-10 | 32 |
somatic stem cell | 2.02e-09 | 91 |
multi fate stem cell | 2.02e-09 | 91 |
stem cell | 2.37e-09 | 97 |
hematopoietic lineage restricted progenitor cell | 5.82e-09 | 25 |
CNS neuron (sensu Vertebrata) | 9.04e-09 | 23 |
neuroblast (sensu Vertebrata) | 9.04e-09 | 23 |
common myeloid progenitor | 4.54e-08 | 19 |
myeloid cell | 5.29e-07 | 16 |
connective tissue cell | 6.07e-07 | 46 |
mesenchymal cell | 6.07e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.72e-13 | 45 |
blood island | 1.72e-13 | 45 |
hemolymphoid system | 7.20e-13 | 48 |
immune system | 7.20e-13 | 48 |
bone marrow | 1.88e-07 | 16 |
hemopoietic organ | 2.61e-07 | 29 |
immune organ | 2.61e-07 | 29 |
connective tissue | 6.07e-07 | 46 |