FFCP PHASE1:Mm9::chr8:47825203..47825225,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:47825203..47825225,+
|short_description=p3@Irf2
|description=CAGE_peak_3_at_Irf2_5end
|association_with_transcript=104bp_to_ENSMUST00000034041,NM_008391,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16363 | |EntrezGene=16363 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=P23906,Q3U2Z2 | |UniProt=P23906,Q3U2Z2 | ||
|association_with_transcript=104bp_to_ENSMUST00000034041,NM_008391,uc009lqo.2,uc012gdl.1_5end | |||
|cluster_id=chr8:47825203..47825225,+ | |||
|description=CAGE_peak_3_at_Irf2_5end | |||
|id=chr8:47825203..47825225,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.14e-11!32;CL:0002032!4.14e-11!32;CL:0000037!4.14e-11!32;CL:0000566!4.14e-11!32;CL:0000837!4.14e-11!32;CL:0000063!5.43e-10!66;CL:0002320!7.02e-10!46;CL:0000134!7.02e-10!46;CL:0002031!9.69e-10!25;CL:0000738!1.27e-08!17;CL:0002087!1.27e-08!17;CL:0000838!2.77e-08!12;CL:0000084!1.37e-07!11;CL:0000827!1.37e-07!11;CL:0000542!1.47e-07!13;CL:0000051!1.47e-07!13;CL:0000219!7.74e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.55e-16,32;CL:0002032,1.55e-16,32;CL:0000037,1.55e-16,32;CL:0000837,1.55e-16,32;CL:0002031,2.06e-15,25;CL:0002320,7.25e-14,46;CL:0000134,7.25e-14,46;CL:0000838,1.48e-12,12;CL:0000084,2.01e-11,11;CL:0000827,2.01e-11,11;CL:0000542,2.86e-11,13;CL:0000051,2.86e-11,13;CL:0000738,2.95e-11,17;CL:0002087,2.95e-11,17;CL:0000219,2.42e-10,54;CL:0000791,6.37e-10,9;CL:0000789,6.37e-10,9;CL:0002420,6.37e-10,9;CL:0002419,6.37e-10,9;CL:0000790,6.37e-10,9;CL:0000624,5.63e-09,8;CL:0002563,3.16e-07,9;CL:0002251,3.16e-07,9;CL:0000049,3.70e-07,19;CL:0000893,6.88e-07,6;CL:0002489,6.88e-07,6;CL:0000898,6.88e-07,6;CL:0000809,6.88e-07,6;CL:0000810,6.88e-07,6;CL:0000895,6.88e-07,6;CL:0000808,6.88e-07,6;CL:0000894,6.88e-07,6;CL:0000806,6.88e-07,6;CL:0000807,6.88e-07,6;CL:0000805,6.88e-07,6;CL:0002425,6.88e-07,6;CL:0002436,6.88e-07,6;CL:0002427,6.88e-07,6;CL:0002428,6.88e-07,6;CL:0002429,6.88e-07,6;CL:0002433,6.88e-07,6;CL:0002431,6.88e-07,6;CL:0002432,6.88e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.88e-14!48;UBERON:0002405!2.15e-12!70;UBERON:0002390!5.85e-12!45;UBERON:0003061!5.85e-12!45;UBERON:0002384!7.02e-10!46;UBERON:0001007!4.88e-09!128;UBERON:0001555!4.88e-09!128;UBERON:0007026!4.88e-09!128;UBERON:0004923!6.60e-09!24;UBERON:0004119!7.37e-09!130;UBERON:0000925!7.37e-09!130;UBERON:0006595!7.37e-09!130;UBERON:0005911!2.70e-08!69;UBERON:0004921!3.01e-08!126;UBERON:0004185!3.01e-08!126;UBERON:0003081!5.05e-08!88;UBERON:0000344!6.05e-08!15;UBERON:0003929!2.82e-07!55;UBERON:0000490!2.84e-07!66;UBERON:0004177!5.15e-07!29;UBERON:0001242!8.57e-07!13;UBERON:0000060!8.57e-07!13;UBERON:0001262!8.57e-07!13;UBERON:0004786!8.57e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.44e-15,48;UBERON:0002405,1.44e-15,48;UBERON:0002384,7.25e-14,46;UBERON:0002390,5.22e-13,45;UBERON:0003061,5.22e-13,45;UBERON:0000344,5.31e-12,15;UBERON:0001007,6.09e-12,116;UBERON:0001555,6.09e-12,116;UBERON:0007026,6.09e-12,116;UBERON:0004119,1.83e-11,118;UBERON:0000925,1.83e-11,118;UBERON:0006595,1.83e-11,118;UBERON:0004923,4.99e-11,24;UBERON:0004921,9.87e-11,114;UBERON:0001242,3.97e-10,13;UBERON:0001262,3.97e-10,13;UBERON:0004786,3.97e-10,13;UBERON:0005911,1.50e-09,69;UBERON:0003929,5.55e-09,55;UBERON:0004177,1.07e-07,29;UBERON:0005057,1.07e-07,29;UBERON:0000160,2.86e-07,31;UBERON:0003350,3.16e-07,9;UBERON:0004808,3.16e-07,9;UBERON:0001277,3.16e-07,9 | |||
|phase1_expression=0,3.14077866875425,5.0049916332849,2.72217790176147,2.50447864973174,1.84667199103079,2.80335168714631,7.36002943616985,4.36445038670167,3.27690336850791,3.5955773327356,3.90883579077148,4.79362043807376,4.28359971853087,2.99798785634096,6.07425802169478,0,27.6029394688458,26.6002001195133,18.6731446791133,1.02051948181284,3.3758923408301,2.35079810225042,5.91971964335605,3.67054849707472,1.14846392823004,4.30761996159075,4.30942465371778,1.33016393619462,3.52842181663903,2.21730510655305,0,0,15.8481681015439,2.3108129580102,1.32987716286794,1.22501613757421,1.25559489221072,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.755380907853464,0.506884656097573,0.734187008646726,0,0,0.439372365468944,0,0.419959264876088,0,19.6305649087552,6.5282592781021,4.36921938885203,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.898800331555214,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0.075726193333184,0.0755715601067855,2.31891590961342,0.860423876981386,0.679971333707751,0,3.24888208723835,1.34408066129201,2.52799956237153,0,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,1.82694207550496,34.9566142923682,1.1875371125186,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,3.03658649531814,1.76922110389975,0.323533699894818,0.662524555381181,0.969750506270444,0,0.292780797011547,0,5.36459815938042,3.35482348616577,1.19980546198682,1.77898317902291,0.149790639404823,1.37250180845588,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0.305518091550949,1.49288364732112,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,0.671032093801859,0.420579897128254,0.102904612379284,7.26921322564356,1.85115396664481,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,1.89811624617805,0.494096864172033,1.25667604400135,0.994782360205754,0.974820435595601,1.79763881730844,2.16138049874694,3.18626037206988,0,0,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0.493588655687202,1.48226313543574,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,2.18426371180192,0.252578877947112,0.358794827043824,3.37710464954357,9.42241269849684,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,1.36593553500459,0.945810864637146,0.8858587585951,1.11618338060241,3.4411296090305,3.45369963731791,2.16973587872267,10.5553898757491,8.15858525728064,0.983528546038072,1.65562047782839,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.809621403349789,0,0,0.963963949265421,0.709700426041343,0.178065603667255,0.325773918707152,1.64970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0.938686832254841,0,0.441056796109924,1.31909002353184,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0.874442509889552,0.370850604021019,6.83483523191411,0.82554747185289,0.925972636848558,1.88368457004691,5.46776910884101,5.0331198105435,2.20971958992012,0.979660166265606,2.07299960706636,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,1.42576470620972,1.24267862617385,0,0,0,0.388902376688095,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,2.8441000856536,0.202725215290164,0.718976700153791,0.77952493786677,0.716106782669926,1.58945083825012,1.68273629327956,1.03382669022204,0.706765149637033,1.143102099825,2.01652370273681,2.0466154955348,1.73181314952593,2.22066114144981,0,0.221985953374065,0.269141569828427,0,0.579568782096571,1.12609485270709,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0,0.429742108096597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| |phase1_expression=0,3.14077866875425,5.0049916332849,2.72217790176147,2.50447864973174,1.84667199103079,2.80335168714631,7.36002943616985,4.36445038670167,3.27690336850791,3.5955773327356,3.90883579077148,4.79362043807376,4.28359971853087,2.99798785634096,6.07425802169478,0,27.6029394688458,26.6002001195133,18.6731446791133,1.02051948181284,3.3758923408301,2.35079810225042,5.91971964335605,3.67054849707472,1.14846392823004,4.30761996159075,4.30942465371778,1.33016393619462,3.52842181663903,2.21730510655305,0,0,15.8481681015439,2.3108129580102,1.32987716286794,1.22501613757421,1.25559489221072,0.7813353445238,0.523523743973798,0.588231488031014,0,0.485510353031154,0.755380907853464,0.506884656097573,0.734187008646726,0,0,0.439372365468944,0,0.419959264876088,0,19.6305649087552,6.5282592781021,4.36921938885203,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,2.1314403448383,0.898800331555214,0.384218305321555,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0.45839474333043,0,0,0,0.075726193333184,0.0755715601067855,2.31891590961342,0.860423876981386,0.679971333707751,0,3.24888208723835,1.34408066129201,2.52799956237153,0,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,1.82694207550496,34.9566142923682,1.1875371125186,0.346970653532272,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0.247194967734374,3.03658649531814,1.76922110389975,0.323533699894818,0.662524555381181,0.969750506270444,0,0.292780797011547,0,5.36459815938042,3.35482348616577,1.19980546198682,1.77898317902291,0.149790639404823,1.37250180845588,0,0.173824320192276,0.255715457330331,0,0.324482526135515,0.305518091550949,1.49288364732112,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0.517406741478031,0,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0,1.40442637462647,2.05878325691772,0.852490498186778,0,0,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.438599962275997,0.878200461164203,0.671032093801859,0.420579897128254,0.102904612379284,7.26921322564356,1.85115396664481,0.213288250535234,0.232236671860439,0.257734922644187,0,0.22237804384487,0,1.89811624617805,0.494096864172033,1.25667604400135,0.994782360205754,0.974820435595601,1.79763881730844,2.16138049874694,3.18626037206988,0,0,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.442830443938806,0.156998727841375,0.493588655687202,1.48226313543574,0,0,0.224862112384854,0,0,0,0.287696137450811,0.648540907100142,0.823684239564244,2.87536413054709,1.48856379067401,2.18426371180192,0.252578877947112,0.358794827043824,3.37710464954357,9.42241269849684,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0.476087281772027,1.36593553500459,0.945810864637146,0.8858587585951,1.11618338060241,3.4411296090305,3.45369963731791,2.16973587872267,10.5553898757491,8.15858525728064,0.983528546038072,1.65562047782839,0.321101179975584,0.586058432961016,0,0.252470927204373,0,0.390438744296638,0,0.238968797952552,0,0,0.809621403349789,0,0,0.963963949265421,0.709700426041343,0.178065603667255,0.325773918707152,1.64970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0,0,0.164549020602121,0.608929898229199,0.938686832254841,0,0.441056796109924,1.31909002353184,0.322928853391811,0.241251699712623,0.119372344003136,0.164140899745061,0.874442509889552,0.370850604021019,6.83483523191411,0.82554747185289,0.925972636848558,1.88368457004691,5.46776910884101,5.0331198105435,2.20971958992012,0.979660166265606,2.07299960706636,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,1.42576470620972,1.24267862617385,0,0,0,0.388902376688095,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,0,2.8441000856536,0.202725215290164,0.718976700153791,0.77952493786677,0.716106782669926,1.58945083825012,1.68273629327956,1.03382669022204,0.706765149637033,1.143102099825,2.01652370273681,2.0466154955348,1.73181314952593,2.22066114144981,0,0.221985953374065,0.269141569828427,0,0.579568782096571,1.12609485270709,0.549454872801795,0.428736758158132,1.00314420807073,0,0,0.572895513439397,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0,0.25347929989024,0.377252682772152,0,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.423073039458382,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.0985044823755635,0.409231043169689,0.309873682371932,0,0,0,0.429742108096597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| ||
|short_description=p3@Irf2 | |||
}} | }} |
Latest revision as of 14:39, 25 September 2015
Short description: | p3@Irf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Irf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 104bp_to_ENSMUST00000034041, NM_008391, uc009lqo.2, uc012gdl.1_5end |
EntrezGene: | Irf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.44e-15 | 48 |
immune system | 1.44e-15 | 48 |
connective tissue | 7.25e-14 | 46 |
hematopoietic system | 5.22e-13 | 45 |
blood island | 5.22e-13 | 45 |
mucosa | 5.31e-12 | 15 |
digestive system | 6.09e-12 | 116 |
digestive tract | 6.09e-12 | 116 |
primitive gut | 6.09e-12 | 116 |
endoderm-derived structure | 1.83e-11 | 118 |
endoderm | 1.83e-11 | 118 |
presumptive endoderm | 1.83e-11 | 118 |
organ component layer | 4.99e-11 | 24 |
subdivision of digestive tract | 9.87e-11 | 114 |
intestinal mucosa | 3.97e-10 | 13 |
wall of intestine | 3.97e-10 | 13 |
gastrointestinal system mucosa | 3.97e-10 | 13 |
endo-epithelium | 1.50e-09 | 69 |
gut epithelium | 5.55e-09 | 55 |
hemopoietic organ | 1.07e-07 | 29 |
immune organ | 1.07e-07 | 29 |
intestine | 2.86e-07 | 31 |
epithelium of mucosa | 3.16e-07 | 9 |
gastrointestinal system epithelium | 3.16e-07 | 9 |
intestinal epithelium | 3.16e-07 | 9 |