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FFCP PHASE1:Mm9::chr7:112788831..112788884,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=76932
|EntrezGene=76932
|HGNC=
|HGNC=
|MCL_coexpression_id=414
|TSSclassifier=NA
|UniProt=Q8K221,D6RHM6,D6RI79
|UniProt=Q8K221,D6RHM6,D6RI79
|association_with_transcript=0bp_to_ENSMUST00000084782,ENSMUST00000127759,ENSMUST00000137931,ENSMUST00000157028_5end
|association_with_transcript=0bp_to_ENSMUST00000084782,ENSMUST00000127759,ENSMUST00000137931,ENSMUST00000157028_5end
|cluster_id=chr7:112788831..112788884,-
|description=CAGE_peak_1_at_Arfip2_5end
|description=CAGE_peak_1_at_Arfip2_5end
|id=chr7:112788831..112788884,-
|id=chr7:112788831..112788884,-
|ontology_enrichment_celltype=CL:0000540!3.74e-12!33;CL:0000047!3.74e-12!33;CL:0000031!3.74e-12!33;CL:0000404!3.74e-12!33;CL:0000117!6.28e-11!23;CL:0000337!6.28e-11!23;CL:0000221!2.20e-10!44;CL:0000133!2.20e-10!44;CL:0002319!4.17e-10!43;CL:0000393!8.34e-10!39;CL:0000211!8.34e-10!39;CL:0000055!4.58e-08!50;CL:0002321!9.03e-08!70;CL:0000220!9.03e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000540,3.74e-12,33;CL:0000047,3.74e-12,33;CL:0000031,3.74e-12,33;CL:0000404,3.74e-12,33;CL:0000117,6.28e-11,23;CL:0000337,6.28e-11,23;CL:0000221,2.20e-10,44;CL:0000133,2.20e-10,44;CL:0002319,4.17e-10,43;CL:0000393,8.34e-10,39;CL:0000211,8.34e-10,39;CL:0002321,9.03e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.76e-26!73;UBERON:0005743!1.76e-26!73;UBERON:0000073!5.56e-25!75;UBERON:0001016!5.56e-25!75;UBERON:0004121!1.42e-21!102;UBERON:0000924!1.42e-21!102;UBERON:0006601!1.42e-21!102;UBERON:0001049!3.44e-21!52;UBERON:0005068!3.44e-21!52;UBERON:0006241!3.44e-21!52;UBERON:0007135!3.44e-21!52;UBERON:0000955!1.04e-20!50;UBERON:0006238!1.04e-20!50;UBERON:0000033!1.33e-20!63;UBERON:0002616!2.79e-20!49;UBERON:0002346!2.38e-18!71;UBERON:0003075!2.38e-18!71;UBERON:0007284!2.38e-18!71;UBERON:0003080!3.24e-17!40;UBERON:0002780!7.11e-17!39;UBERON:0001890!7.11e-17!39;UBERON:0006240!7.11e-17!39;UBERON:0003056!2.29e-16!49;UBERON:0002020!2.90e-15!34;UBERON:0002791!8.63e-13!29;UBERON:0003528!8.63e-13!29;UBERON:0001893!8.63e-13!29;UBERON:0000956!3.79e-09!21;UBERON:0001869!3.79e-09!21;UBERON:0000203!3.79e-09!21;UBERON:0007811!1.33e-08!86;UBERON:0000153!2.93e-08!94;UBERON:0002619!6.10e-08!17;UBERON:0002021!1.10e-07!10;UBERON:0000411!1.10e-07!10;UBERON:0001950!1.10e-07!10;UBERON:0001264!1.11e-07!12;UBERON:0003922!1.11e-07!12;UBERON:0002114!1.11e-07!12;UBERON:0003923!1.11e-07!12;UBERON:0003924!1.11e-07!12;UBERON:0003921!1.11e-07!12;UBERON:0001045!4.19e-07!13;UBERON:0002108!6.07e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.76e-26,73;UBERON:0001016,5.56e-25,75;UBERON:0000073,5.54e-23,54;UBERON:0004121,6.89e-23,95;UBERON:0000924,6.89e-23,95;UBERON:0006601,6.89e-23,95;UBERON:0001049,3.44e-21,52;UBERON:0005068,3.44e-21,52;UBERON:0006241,3.44e-21,52;UBERON:0007135,3.44e-21,52;UBERON:0002346,3.71e-20,64;UBERON:0003075,3.71e-20,64;UBERON:0007284,3.71e-20,64;UBERON:0000955,5.47e-19,47;UBERON:0006238,5.47e-19,47;UBERON:0010371,5.69e-19,73;UBERON:0002616,1.44e-18,46;UBERON:0003080,3.24e-17,40;UBERON:0002780,7.11e-17,39;UBERON:0001890,7.11e-17,39;UBERON:0006240,7.11e-17,39;UBERON:0003056,2.29e-16,49;UBERON:0002020,2.90e-15,34;UBERON:0003528,8.63e-13,29;UBERON:0002791,8.63e-13,29;UBERON:0001893,8.63e-13,29;UBERON:0010314,9.02e-11,92;UBERON:0000956,3.79e-09,21;UBERON:0001869,3.79e-09,21;UBERON:0000203,3.79e-09,21;UBERON:0002619,6.10e-08,17;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10;UBERON:0001264,1.11e-07,12
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1.0705323596234,42.0140775796807,41.3994826108648,39.9603491655505,43.6960482286819,48.5175785107722,58.6333310044226,43.5506310260424,73.9393782573441,13.5286305284206,38.8743019714345,43.3501244997596,48.0294435209798,43.3977006885177,39.8736456158236,45.0651796399695,35.8062058320863,33.5549902162275,11.8376219204743,16.9937703692141,19.5926894789471,42.3695699956443,35.9488350076895,28.9723435240483,27.9281645241271,21.8549490259391,20.6736173174346,21.5626709674883,22.9193841382295,22.481007963225,20.3668893976418,22.025481047184,21.6476643690741,22.9078728275875,31.2887929388992,33.2978930061097,28.0804371187659,25.0148078382477,38.6379188064381,42.2285569765159,41.9417219572037,30.6546782083064,76.7405319174106,101.655331671072,99.4302510855502,99.683819338455,99.8466989416825,109.613203163303,102.733570044999,97.8782625336118,88.7132770351714,88.8159121609041,93.1968561153276,30.6172675373321,43.0946863273114,42.6834014385335,39.3832881650636,35.424624484129,46.1447206209535,50.227760483165,43.8854671918845,41.3985780373442,43.9693148469008,47.9075876792553,40.9319160807785,49.1617914216883,42.5127011968332,39.3432962345951,37.1509079200797,46.8172676817216,43.790393045261,49.8623939972001,43.1292835993784,48.0016953339582,49.6932257246145,45.5413122799383,48.6910495718301,48.7486590551413,46.9611073798805,50.4881205128852,44.7218509444333,48.3462645291268,51.0639467208542,42.7086065247027,44.1300081042524,49.9261872667021,44.3119365791863,41.2820147499643,50.4617367434651,41.1719630863919,37.8173055125005,43.2311630475586,40.1476382797518,33.3889683293407
|phase1_expression=60.3761153585073,56.8829914452159,68.2498859084304,52.0238443447748,42.5761370454395,56.7431939062187,47.1897534002962,19.7558684865612,8.4473233291,7.95819389494778,24.4841694562472,26.8832175814284,19.8592846720199,21.3305781902354,18.9872564234928,17.412872995525,11.1929900500503,25.7101664766964,23.8579114473985,22.0682618934976,38.2694805679814,29.7872853602656,31.8663742749501,34.3983709005824,41.0642613110234,47.0870210574317,48.2453435698164,50.420268448498,44.6555035722479,39.0646701127893,51.4414784720307,66.0431900398016,47.9750534315965,79.2408405077194,43.3277429626912,40.7274881128306,37.9755002648007,15.4856703372656,14.8453715459522,16.7527598071615,14.1175557127443,17.0761371239611,17.9638830621527,38.2726326645755,34.9750412707325,33.0384153891027,60.244133514799,40.3346539303826,42.3994332677531,42.3857179981938,33.4567547684616,37.3756667348926,19.9661301208706,21.035502118329,9.07453257684653,44.7631418702548,39.5416147115484,37.1283906439758,66.5621156228077,91.5154394140617,83.0319138593095,51.1655243424389,39.1289710288901,50.3943841677583,41.5323872278129,55.4174489657958,52.7296194512392,53.0221261343745,50.7042204188456,62.6427553859045,52.7915652991969,64.8427734596634,79.7335432835325,53.40598845772,48.3061173931911,54.2339084099912,112.318198619376,62.0560463094012,72.8094967634594,70.6910502233839,56.2649008154819,75.5324387307302,72.8667627393604,79.9122906244986,65.5504482962515,73.0678891974696,68.4807784643685,61.6982165681745,34.0010608065996,25.9966166767342,37.9722480199198,32.6961073252927,16.319312008986,28.6042691568043,24.0417274455638,22.8493712419641,25.5608844639788,17.8951838706961,24.1600984280668,24.7337702157238,53.6613429349153,37.2146784501522,40.7688383530633,63.9960032837998,46.3290827763998,46.1114955164679,48.0248222764044,31.4005669227415,18.9024655062435,37.7043033224655,45.1061849591953,44.4519598335726,40.1270965225542,42.2023393547343,38.8042733547826,32.4219805630563,34.8544904505467,36.2944385868978,11.4999371753484,35.7504738383774,19.4340536245146,28.6076399349781,39.1422698558057,54.7500090411593,56.9695042532598,40.8731288333746,15.9354115592874,13.7977628128484,17.0274104277907,56.7706523344278,64.965085600245,58.9318911409334,62.9244039096041,77.9932144857508,62.336413367868,69.4392605930003,52.0399149275116,41.427521213161,56.8626206475768,33.4602550859494,42.5493848488041,48.7392461398963,39.4336064273715,44.7593308972074,45.652490930541,47.1458490648247,53.0351761008065,48.894937069674,28.2394070742023,32.5262457888649,42.5801720476756,52.3877800501904,53.1070246020892,42.4867643157043,58.236344603448,41.2000932314281,13.3420505589515,14.6688307055388,19.6072814582959,24.2337153866537,28.1431271977315,34.9320399234369,31.487049832833,34.4337405557957,35.6357030769844,28.1366073147993,28.4369805483596,31.0595810696671,28.1397343352052,30.2068133905535,22.6992666728396,26.3159977365598,25.2482632584708,21.8756462579406,62.876694620674,53.20168460009,42.9544417878937,49.7167065327463,35.8324260899193,35.996684138368,34.7942145569652,35.2946168090849,37.1371333220933,37.4744483441741,37.0132668004719,37.8807595865225,42.4756502872455,35.4142520233248,46.2064886472315,38.6492345721315,39.1209870273197,49.3870357670831,38.8819196953817,40.9009675142829,38.3206301288473,37.6754956513831,46.5485969202302,36.9615770821979,41.1669856678915,42.8069429140846,38.9356845046609,44.1761846840046,27.866546946192,14.8492144087324,14.7419246334902,13.9414509678609,11.5630269191447,16.4000468631643,16.0414286622294,15.8232875597946,12.1601420081277,18.1210532704134,10.0637744569148,18.9791883310937,19.3463357331028,16.4176270665623,13.9929982547091,11.5786445127208,34.5488465611551,38.6562480011789,35.8522948172457,41.9270361864715,45.5299081679694,37.0188828946413,43.0858990003685,46.2466745422983,38.778245450123,43.1856144815111,45.9229733733563,40.9658286789345,43.1712454664739,43.1054194572905,43.729472342389,44.0563603893155,59.0117127622843,50.2204878274613,55.550504135776,56.3788212508497,18.0328439914343,18.4303776859192,43.2246260600272,37.0916807081807,51.4861920581389,54.962823529087,50.5752990167035,50.9537755419898,50.1965270076869,54.359589571504,59.2931666919785,60.0870861708779,37.0463622393581,58.9397148138615,45.6083486190013,48.0063057850078,144.692200790559,49.0416885033063,59.557740722056,81.6659995343039,126.979813938732,94.0751552708418,66.4160713442328,61.0736665522209,74.151454704022,104.608166876755,156.019540690998,161.922802899653,81.0246261694015,47.1760066362033,60.5398640103291,51.8695624776453,55.5074931300316,70.6340517704199,67.958745508676,89.5126950396922,30.9766654644098,32.1984747713007,116.43899417302,38.4184969353648,33.9075296061402,32.508666536276,36.766681952966,33.8130253474826,43.4306446578478,45.6146242945854,15.8909919142003,37.7687968372697,28.890346269675,16.9531611304222,14.3528939107076,15.7856939512501,19.0375841593118,19.4532518729885,19.6243962802282,58.2349076989219,38.7511592136891,41.0705323596234,42.0140775796807,41.3994826108648,39.9603491655505,43.6960482286819,48.5175785107722,58.6333310044226,43.5506310260424,73.9393782573441,13.5286305284206,38.8743019714345,43.3501244997596,48.0294435209798,43.3977006885177,39.8736456158236,45.0651796399695,35.8062058320863,33.5549902162275,11.8376219204743,16.9937703692141,19.5926894789471,42.3695699956443,35.9488350076895,28.9723435240483,27.9281645241271,21.8549490259391,20.6736173174346,21.5626709674883,22.9193841382295,22.481007963225,20.3668893976418,22.025481047184,21.6476643690741,22.9078728275875,31.2887929388992,33.2978930061097,28.0804371187659,25.0148078382477,38.6379188064381,42.2285569765159,41.9417219572037,30.6546782083064,76.7405319174106,101.655331671072,99.4302510855502,99.683819338455,99.8466989416825,109.613203163303,102.733570044999,97.8782625336118,88.7132770351714,88.8159121609041,93.1968561153276,30.6172675373321,43.0946863273114,42.6834014385335,39.3832881650636,35.424624484129,46.1447206209535,50.227760483165,43.8854671918845,41.3985780373442,43.9693148469008,47.9075876792553,40.9319160807785,49.1617914216883,42.5127011968332,39.3432962345951,37.1509079200797,46.8172676817216,43.790393045261,49.8623939972001,43.1292835993784,48.0016953339582,49.6932257246145,45.5413122799383,48.6910495718301,48.7486590551413,46.9611073798805,50.4881205128852,44.7218509444333,48.3462645291268,51.0639467208542,42.7086065247027,44.1300081042524,49.9261872667021,44.3119365791863,41.2820147499643,50.4617367434651,41.1719630863919,37.8173055125005,43.2311630475586,40.1476382797518,33.3889683293407
|short_description=p1@Arfip2
|short_description=p1@Arfip2
}}
}}

Latest revision as of 16:37, 25 September 2015

Short description:p1@Arfip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arfip2_5end
Coexpression cluster:MCL_coexpression_mm9:414
Association with transcript: 0bp_to_ENSMUST00000084782, ENSMUST00000127759, ENSMUST00000137931, ENSMUST00000157028_5end
EntrezGene:Arfip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arfip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G760.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I556.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I668.25
CD326+ enterocyte, pool1.CNhs13542.11848-124I352.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I756.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I847.19
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F126.88
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.33
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A118.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.71
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A338.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D134.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D241.06
GP2+ M cell, pool1.CNhs13228.11845-124H947.09
GP2+ M cell, pool2.CNhs13231.11846-124I148.25
GP2+ M cell, pool3.CNhs13240.11847-124I250.42
Ileum epithelium, pool1.CNhs13199.10252-104B944.66
Ileum epithelium, pool2.CNhs13232.10253-104C139.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C851.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I366.04
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G647.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F543.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F640.73
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H316.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D838.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D934.98
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.04
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B760.24
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.33
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B842.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C342.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C433.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.97
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C144.76
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E139.54
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C537.13
Mouse Granule cells, donor1.CNhs12131.11713-123C366.56
Mouse Granule cells, donor2.CNhs12357.11731-123E391.52
Mouse Granule cells, donor3.CNhs12108.11636-122C783.03
Mouse Meningeal cells, donor1.CNhs12132.11716-123C651.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D139.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C750.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E741.53
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D255.42
Mouse Microglia, donor1.CNhs12629.11718-123C852.73
Mouse Microglia, donor2.CNhs12634.11736-123E853.02
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D550.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F562.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D952.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F164.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D579.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D253.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3112.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F362.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D772.81
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D470.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F456.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D875.53
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E472.87
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I665.55
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D673.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F668.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E161.70
Mouse Schwann, donor1.CNhs12507.11728-123D934.00
Mouse Schwann, donor2.CNhs12573.11746-123F926.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.97
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F732.70
Mouse hepatocyte, donor1.CNhs13078.11714-123C416.32
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.60
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.85
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I824.73
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G653.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H137.21
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I840.77
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G146.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G246.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G348.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B631.40
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D737.70
adrenal gland, embryo E14.CNhs11038.406-44C545.11
adrenal gland, embryo E16.CNhs11004.1254-43D644.45
adrenal gland, embryo E17.CNhs11043.1263-45I140.13
adrenal gland, embryo E18.CNhs11026.1262-18F542.20
adrenal gland, neonate N00.CNhs11191.1311-23C138.80
adrenal gland, neonate N25.CNhs11223.1377-27I332.42
amnion, adult pregnant day17.5.CNhs10488.583-22A834.85
aorta, adult.CNhs10498.46-23H136.29
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F535.75
bone (os femoris), neonate N16.CNhs11225.1525-43A619.43
bone (os femoris), neonate N20.CNhs11195.1350-25C328.61
cecum, adult.CNhs10467.37-13H439.14
cerebellum, adult.CNhs10494.15-8B254.75
cerebellum, neonate N30.CNhs11135.1395-42I256.97
colon, adult.CNhs10468.36-18H740.87
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.94
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.03
corpora quadrigemina, adult.CNhs10501.16-22A456.77
corpus striatum, adult.CNhs10487.19-21D864.97
corpus striatum, neonate N00.CNhs11226.630-43F158.93
cortex, adult.CNhs10473.12-14D562.92
cortex, neonate N30.CNhs11107.1392-42F277.99
diencephalon, adult.CNhs10482.20-12F262.34
diencephalon, neonate N30.CNhs11201.1388-42B269.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B152.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.43
epididymis, adult.CNhs10490.58-23B256.86
eyeball, adult.CNhs10484.31-12G433.46
eyeball, embryo E12.CNhs11016.345-16C642.55
eyeball, embryo E14.CNhs10521.399-16E248.74
eyeball, embryo E15.CNhs10593.426-16C939.43
eyeball, embryo E17.CNhs11023.1261-18D444.76
eyeball, neonate N00.CNhs11207.633-15C645.65
eyeball, neonate N01.CNhs11140.1532-43E747.15
eyeball, neonate N02.CNhs11205.1551-44G853.04
eyeball, neonate N16.CNhs11188.777-19A248.89
forelimb, embryo E11.CNhs10596.335-25E228.24
forelimb, embryo E12.CNhs10600.359-14H232.53
forelimb, embryo E13.CNhs10589.384-1E242.58
forelimb, embryo E14.CNhs10577.413-26A852.39
forelimb, embryo E15.CNhs11007.437-20E753.11
forelimb, embryo E17.CNhs10598.1517-43C442.49
forelimb, embryo E18.CNhs11008.1520-43B558.24
gonad, embryo E13.CNhs11044.1564-45I641.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.67
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E924.23
heart, embryo E12.CNhs11015.353-12F528.14
heart, embryo E13.CNhs11013.376-3I934.93
heart, embryo E14.CNhs10597.403-26D431.49
heart, embryo E15.CNhs11017.431-16C834.43
heart, embryo E16.CNhs11021.457-17C635.64
heart, embryo E17.CNhs11025.479-18E528.14
heart, embryo E18.CNhs11030.1283-20G328.44
heart, neonate N00.CNhs11213.639-21E331.06
heart, neonate N03.CNhs11221.1349-25I228.14
heart, neonate N10.CNhs11118.749-24G130.21
heart, neonate N16.CNhs11209.782-15G122.70
heart, neonate N20.CNhs11127.821-26I626.32
heart, neonate N25.CNhs11196.1351-25D325.25
heart, neonate N30.CNhs11202.1390-42D221.88
hippocampus, adult.CNhs10478.13-16E862.88
hippocampus, neonate N00.CNhs11228.627-43G153.20
intestinal mucosa, adult.CNhs10506.860-29I342.95
intestine, adult.CNhs10496.178-9A349.72
intestine, embryo E12.CNhs11019.1251-16I535.83
intestine, embryo E13.CNhs11010.381-16D536.00
intestine, embryo E15.CNhs10602.976-16D834.79
intestine, embryo E16.CNhs10585.463-22H435.29
intestine, embryo E17.CNhs10582.482-18D337.14
intestine, embryo E18.CNhs10526.1289-20F737.47
intestine, neonate N00.CNhs11126.644-26D137.01
intestine, neonate N01.CNhs11192.1322-23E937.88
intestine, neonate N06.CNhs11102.688-20B842.48
intestine, neonate N07.CNhs11095.720-20F235.41
intestine, neonate N10.CNhs11098.755-23A546.21
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E339.12
intestine, neonate N30.CNhs11131.1384-42G149.39
kidney, embryo E14.CNhs10606.411-4I938.88
kidney, embryo E15.CNhs10997.434-16F840.90
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I237.68
kidney, embryo E18.CNhs11001.1288-20C746.55
kidney, neonate N00.CNhs11214.646-21G736.96
kidney, neonate N10.CNhs11206.758-6D541.17
kidney, neonate N20.CNhs11113.832-19I142.81
kidney, neonate N25.CNhs11122.1353-25F338.94
kidney, neonate N30.CNhs11203.1385-42H144.18
liver, adult pregnant day01.CNhs10466.508-5B227.87
liver, embryo E12.CNhs10601.355-15F814.85
liver, embryo E13.CNhs10524.378-3H614.74
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D711.56
liver, embryo E16.CNhs10523.462-17F516.40
liver, embryo E17.CNhs10510.481-18A316.04
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F412.16
liver, neonate N03.CNhs11123.1345-25G218.12
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H218.98
liver, neonate N10.CNhs11115.751-24B919.35
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H113.99
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B134.55
lung, embryo E12.CNhs10522.354-16G238.66
lung, embryo E14.CNhs10604.404-26F835.85
lung, embryo E15.CNhs11020.432-17C541.93
lung, embryo E16.CNhs10998.458-17B645.53
lung, embryo E17.CNhs10605.480-44A637.02
lung, embryo E18.CNhs10583.1287-20I643.09
lung, neonate N00.CNhs11224.640-42C646.25
lung, neonate N06.CNhs11212.683-20E538.78
lung, neonate N07.CNhs11111.715-19A343.19
lung, neonate N10.CNhs11219.750-23E645.92
lung, neonate N20.CNhs11109.822-18A440.97
lung, neonate N25.CNhs11119.1359-25C743.17
lung, neonate N30.CNhs11133.1394-42H243.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A144.06
mammary gland, adult lactating day02.CNhs10480.595-22B659.01
mammary gland, adult pregnant day19.CNhs10476.588-5H250.22
medulla oblongata, adult.CNhs10477.17-12C255.55
medulla oblongata, neonate N30.CNhs11200.1396-42A356.38
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.43
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.09
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E351.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D754.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D850.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D950.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D450.20
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D554.36
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D659.29
olfactory brain, adult.CNhs10489.18-22I960.09
ovary, adult.CNhs10507.91-2I737.05
ovary, embryo E18.CNhs11040.505-44H758.94
ovary, neonate N00.CNhs11217.1299-22I445.61
oviduct, adult pregnant day01.CNhs10500.988-6G648.01
pancreas, adult.CNhs10486.34-16E4144.69
pancreas, embryo E14.CNhs11012.405-44F449.04
pancreas, embryo E15.CNhs11042.1556-45F259.56
pancreas, embryo E16.CNhs11003.460-26E581.67
pancreas, embryo E17.CNhs10599.1558-45G3126.98
pancreas, embryo E18.CNhs10580.1535-43I794.08
pancreas, neonate N00.CNhs11105.645-26G966.42
pancreas, neonate N01.CNhs11138.1531-43D761.07
pancreas, neonate N02.CNhs11139.1539-43D874.15
pancreas, neonate N16.CNhs11136.787-43B6104.61
pancreas, neonate N25.CNhs11094.1555-45E2156.02
pancreas, neonate N30.CNhs11182.1548-44H5161.92
pituitary gland, adult.CNhs10493.21-1G881.02
pituitary gland, embryo E12.CNhs11018.346-16E647.18
pituitary gland, embryo E13.CNhs11009.370-44C760.54
pituitary gland, embryo E14.CNhs11037.398-44A551.87
pituitary gland, embryo E15.CNhs10592.427-16B955.51
pituitary gland, embryo E16.CNhs11036.449-43F670.63
pituitary gland, embryo E17.CNhs11039.1265-44F567.96
pituitary gland, neonate N00.CNhs11190.1308-22E989.51
placenta, adult pregnant day10.CNhs10472.539-13I730.98
placenta, adult pregnant day17.CNhs10464.577-18G332.20
prostate, adult.CNhs10470.859-1F8116.44
skin, adult.CNhs10492.30-1C338.42
skin, neonate N00.CNhs11124.650-25G433.91
skin, neonate N03.CNhs11215.662-22H332.51
skin, neonate N06.CNhs11097.693-20I536.77
skin, neonate N10.CNhs11108.762-6C433.81
small intestine, neonate N16.CNhs11114.790-21I143.43
spinal cord, adult.CNhs10505.24-13C945.61
spleen, adult.CNhs10465.25-2G215.89
spleen, embryo E16.CNhs11035.461-43C137.77
spleen, embryo E18.CNhs11011.1271-21F228.89
spleen, neonate N10.CNhs11116.752-24D116.95
spleen, neonate N20.CNhs11112.824-19H114.35
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.62
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E338.75
stomach, embryo E15.CNhs10603.1252-16G841.07
stomach, embryo E16.CNhs11022.459-17D442.01
stomach, embryo E17.CNhs11006.1035-18D541.40
stomach, embryo E18.CNhs10999.1286-20C639.96
stomach, neonate N03.CNhs11193.1340-24B843.70
stomach, neonate N07.CNhs11210.718-18A948.52
stomach, neonate N25.CNhs11104.1355-25E458.63
stomach, neonate N30.CNhs11134.1386-42I143.55
submandibular gland, adult.CNhs10469.59-29C173.94
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F538.87
testis, embryo E15.CNhs11034.443-27C543.35
testis, embryo E16.CNhs11033.470-26G548.03
testis, embryo E17.CNhs11029.486-18I543.40
testis, embryo E18.CNhs11027.503-18G539.87
testis, neonate N00.CNhs11189.1300-22B745.07
testis, neonate N07.CNhs11222.726-26I435.81
testis, neonate N10.CNhs11204.763-44D933.55
testis, neonate N20.CNhs11110.839-18H311.84
testis, neonate N30.CNhs11130.1391-42E216.99
thymus, adult.CNhs10471.38-12B519.59
thymus, embryo E14.CNhs11041.402-44I442.37
thymus, embryo E15.CNhs11005.430-45I235.95
thymus, embryo E16.CNhs11002.456-26C528.97
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G421.85
thymus, neonate N02.CNhs11181.1541-43F820.67
thymus, neonate N03.CNhs11137.2104-43C721.56
thymus, neonate N06.CNhs11197.681-26C422.92
thymus, neonate N07.CNhs11211.713-19D322.48
thymus, neonate N10.CNhs11194.748-24E420.37
thymus, neonate N20.CNhs11186.820-7A222.03
thymus, neonate N25.CNhs11125.1362-25G721.65
thymus, neonate N30.CNhs11132.1393-42G222.91
tongue, adult.CNhs10499.32-1B431.29
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H333.30
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.08
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.01
urinary bladder, adult.CNhs10481.879-12E438.64
uterus, adult pregnant day19.CNhs10497.590-15F542.23
uterus, adult.CNhs10509.92-27E541.94
vagina, adult.CNhs10502.89-27D530.65
vesicular gland, adult.CNhs10491.51-27F876.74
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1101.66
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A299.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A399.68
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D799.85
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4109.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5102.73
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A697.88
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A788.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A888.82
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A993.20
whole body, embryo E11.CNhs11014.324-5I830.62
whole body, embryo E12.CNhs10587.857-27C943.09
whole body, embryo E13.CNhs10512.372-23H242.68
whole body, embryo E14.5.CNhs10578.420-27D239.38
whole body, embryo E14.CNhs10519.395-14B135.42
whole body, embryo E16.CNhs10514.453-14F246.14
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G550.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G543.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G541.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G543.97
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G547.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G540.93
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G549.16
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G542.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G537.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G546.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G543.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G549.86
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G543.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G548.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G549.69
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G545.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G548.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G548.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G546.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G550.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G544.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G548.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G551.06
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G542.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G544.13
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G549.93
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G544.31
whole body, embryo E17.5.CNhs10513.490-9F941.28
whole body, embryo E17.CNhs10517.475-3I550.46
whole body, embryo E18.CNhs10516.493-3B341.17
whole body, neonate N00.CNhs10525.657-19C237.82
whole body, neonate N01.CNhs10576.659-23C643.23
whole body, neonate N06.CNhs10515.692-21D140.15
whole body, neonate N10.CNhs10518.761-6B433.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.74e-1233
neuronal stem cell3.74e-1233
neuroblast3.74e-1233
electrically signaling cell3.74e-1233
CNS neuron (sensu Vertebrata)6.28e-1123
neuroblast (sensu Vertebrata)6.28e-1123
ectodermal cell2.20e-1044
neurectodermal cell2.20e-1044
neural cell4.17e-1043
electrically responsive cell8.34e-1039
electrically active cell8.34e-1039
embryonic cell9.03e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.76e-2673
nervous system5.56e-2575
regional part of nervous system5.54e-2354
ectoderm-derived structure6.89e-2395
ectoderm6.89e-2395
presumptive ectoderm6.89e-2395
neural tube3.44e-2152
neural rod3.44e-2152
future spinal cord3.44e-2152
neural keel3.44e-2152
neurectoderm3.71e-2064
neural plate3.71e-2064
presumptive neural plate3.71e-2064
brain5.47e-1947
future brain5.47e-1947
ecto-epithelium5.69e-1973
regional part of brain1.44e-1846
anterior neural tube3.24e-1740
regional part of forebrain7.11e-1739
forebrain7.11e-1739
future forebrain7.11e-1739
pre-chordal neural plate2.29e-1649
gray matter2.90e-1534
brain grey matter8.63e-1329
regional part of telencephalon8.63e-1329
telencephalon8.63e-1329
structure with developmental contribution from neural crest9.02e-1192
cerebral cortex3.79e-0921
cerebral hemisphere3.79e-0921
pallium3.79e-0921
regional part of cerebral cortex6.10e-0817
occipital lobe1.10e-0710
visual cortex1.10e-0710
neocortex1.10e-0710
pancreas1.11e-0712
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