FFCP PHASE1:Mm9::chr3:75361452..75361483,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20713 | |EntrezGene=20713 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=O35684,E0CYW0 | |UniProt=O35684,E0CYW0 | ||
|association_with_transcript=0bp_to_ENSMUST00000029423,ENSMUST00000161776,NM_009250,uc008pnd.2,uc008pne.2_5end | |association_with_transcript=0bp_to_ENSMUST00000029423,ENSMUST00000161776,NM_009250,uc008pnd.2,uc008pne.2_5end | ||
|cluster_id=chr3:75361452..75361483,+ | |||
|description=CAGE_peak_1_at_Serpini1_5end | |description=CAGE_peak_1_at_Serpini1_5end | ||
|id=chr3:75361452..75361483,+ | |id=chr3:75361452..75361483,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.56e-14!33;CL:0000047!1.56e-14!33;CL:0000031!1.56e-14!33;CL:0000404!1.56e-14!33;CL:0000393!1.76e-11!39;CL:0000211!1.76e-11!39;CL:0000117!1.36e-09!23;CL:0000337!1.36e-09!23;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!1.63e-07!43 | |ontology_enrichment_celltype=CL:0000540!1.56e-14!33;CL:0000047!1.56e-14!33;CL:0000031!1.56e-14!33;CL:0000404!1.56e-14!33;CL:0000393!1.76e-11!39;CL:0000211!1.76e-11!39;CL:0000117!1.36e-09!23;CL:0000337!1.36e-09!23;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!1.63e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-14,33;CL:0000047,1.22e-14,33;CL:0000031,1.22e-14,33;CL:0000404,1.22e-14,33;CL:0000393,1.28e-11,39;CL:0000211,1.28e-11,39;CL:0000117,1.17e-09,23;CL:0000337,1.17e-09,23;CL:0000221,1.72e-07,44;CL:0000133,1.72e-07,44;CL:0002319,2.58e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.49e-21!73;UBERON:0005743!8.49e-21!73;UBERON:0000073!5.36e-20!75;UBERON:0001016!5.36e-20!75;UBERON:0002346!1.10e-17!71;UBERON:0003075!1.10e-17!71;UBERON:0007284!1.10e-17!71;UBERON:0001049!4.18e-16!52;UBERON:0005068!4.18e-16!52;UBERON:0006241!4.18e-16!52;UBERON:0007135!4.18e-16!52;UBERON:0000955!1.59e-15!50;UBERON:0006238!1.59e-15!50;UBERON:0004121!4.36e-15!102;UBERON:0000924!4.36e-15!102;UBERON:0006601!4.36e-15!102;UBERON:0000033!6.72e-15!63;UBERON:0002616!7.16e-15!49;UBERON:0002020!1.17e-14!34;UBERON:0003080!7.35e-13!40;UBERON:0003056!8.00e-13!49;UBERON:0002791!2.15e-12!29;UBERON:0003528!2.15e-12!29;UBERON:0001893!2.15e-12!29;UBERON:0002780!2.65e-12!39;UBERON:0001890!2.65e-12!39;UBERON:0006240!2.65e-12!39;UBERON:0000956!4.30e-09!21;UBERON:0001869!4.30e-09!21;UBERON:0000203!4.30e-09!21;UBERON:0007811!7.97e-09!86;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0000153!2.01e-07!94;UBERON:0002619!3.14e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!8.49e-21!73;UBERON:0005743!8.49e-21!73;UBERON:0000073!5.36e-20!75;UBERON:0001016!5.36e-20!75;UBERON:0002346!1.10e-17!71;UBERON:0003075!1.10e-17!71;UBERON:0007284!1.10e-17!71;UBERON:0001049!4.18e-16!52;UBERON:0005068!4.18e-16!52;UBERON:0006241!4.18e-16!52;UBERON:0007135!4.18e-16!52;UBERON:0000955!1.59e-15!50;UBERON:0006238!1.59e-15!50;UBERON:0004121!4.36e-15!102;UBERON:0000924!4.36e-15!102;UBERON:0006601!4.36e-15!102;UBERON:0000033!6.72e-15!63;UBERON:0002616!7.16e-15!49;UBERON:0002020!1.17e-14!34;UBERON:0003080!7.35e-13!40;UBERON:0003056!8.00e-13!49;UBERON:0002791!2.15e-12!29;UBERON:0003528!2.15e-12!29;UBERON:0001893!2.15e-12!29;UBERON:0002780!2.65e-12!39;UBERON:0001890!2.65e-12!39;UBERON:0006240!2.65e-12!39;UBERON:0000956!4.30e-09!21;UBERON:0001869!4.30e-09!21;UBERON:0000203!4.30e-09!21;UBERON:0007811!7.97e-09!86;UBERON:0002021!1.11e-07!10;UBERON:0000411!1.11e-07!10;UBERON:0001950!1.11e-07!10;UBERON:0000153!2.01e-07!94;UBERON:0002619!3.14e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.34e-20,73;UBERON:0001016,8.34e-20,75;UBERON:0002346,4.61e-18,64;UBERON:0003075,4.61e-18,64;UBERON:0007284,4.61e-18,64;UBERON:0000073,4.08e-17,54;UBERON:0001049,5.21e-16,52;UBERON:0005068,5.21e-16,52;UBERON:0006241,5.21e-16,52;UBERON:0007135,5.21e-16,52;UBERON:0002020,9.18e-15,34;UBERON:0004121,1.17e-14,95;UBERON:0000924,1.17e-14,95;UBERON:0006601,1.17e-14,95;UBERON:0010314,4.54e-14,92;UBERON:0000955,7.77e-14,47;UBERON:0006238,7.77e-14,47;UBERON:0010371,1.07e-13,73;UBERON:0002616,3.36e-13,46;UBERON:0003080,5.96e-13,40;UBERON:0003056,6.49e-13,49;UBERON:0003528,1.76e-12,29;UBERON:0002791,1.76e-12,29;UBERON:0001893,1.76e-12,29;UBERON:0002780,2.17e-12,39;UBERON:0001890,2.17e-12,39;UBERON:0006240,2.17e-12,39;UBERON:0000956,3.74e-09,21;UBERON:0001869,3.74e-09,21;UBERON:0000203,3.74e-09,21;UBERON:0002021,9.94e-08,10;UBERON:0000411,9.94e-08,10;UBERON:0001950,9.94e-08,10;UBERON:0002619,2.83e-07,17 | |||
|phase1_expression=12.0111635328595,7.67745896806594,5.45999087267443,0.30246421130683,0,7.21880869221126,7.2419918584613,15.4947988129892,11.403886494285,16.8526458951835,0.68487187290202,0.159544317990673,15.2368649638773,11.1023911072127,3.99731714178795,6.88415909125408,0.699561878128147,23.5019313191887,22.0754238105239,14.004858509335,44.6477273293116,5.26242041364692,1.30599894569468,4.31979541542198,6.42345986988076,2.8711598205751,8.18447792702242,8.83432054012145,0.760093677825496,0.504060259519861,7.53883736228036,0.635030673459631,0.61506478758457,0,0.577703239502549,1.16364251750945,1.83752420636132,0.418531630736908,0,1.57057123192139,0,2.73218193983378,0.971020706062307,1.51076181570693,1.4192770370732,0.183546752161682,0.782391344348039,0.65407546914134,1.31811709640683,1.74986909166855,0.699932108126813,0,23.8251300601986,16.6833292662609,17.8129713545506,10.0331180054019,5.44413535883638,10.3134418455488,20.0293296251002,21.6886301501533,8.87363964908651,1.0165335962074,0,0,0,0,0.599200221036809,0.768436610643109,53.6075295634829,38.0716746095368,43.1166170770333,20.2812198926701,29.3755159465646,30.5002090045236,15.7186572469908,11.9498442259303,99.1042928994498,74.6970927798348,86.1732651567526,14.2437190748609,20.4017445233374,30.2129754922921,63.0953577743121,127.18434986716,110.014738399303,73.3625177829433,97.5246013473855,58.5294259891444,2.72614295999463,4.53429360640713,4.63783181922684,0.860423876981386,0,0,0.649776417447669,0,9.40977614882737,0,0,0,15.0702459161048,0,0,0,0.432982082022428,0.253359865475099,0,8.22123933977232,16.0541487861246,5.78924342352817,5.03107447621794,13.7009465240464,9.91646638201052,13.2635923686308,9.64227398512779,4.27266410520897,0.494389935468748,12.7247434089522,0.884610551949874,1.45590164952668,1.98757366614354,0.484875253135222,0,86.9558967124295,94.6699114796817,4.85368404896324,5.87094110079009,5.39912457894067,6.09937089950711,123.876858787788,70.4550928340685,36.9423795211821,258.129115485531,254.94831095834,78.9594569326328,99.9406180497387,2.13862664085664,2.23932547098167,0.505445516867349,6.52369753248069,2.86264974517948,9.88579049063934,8.46292010085141,14.0155480587215,10.4776208693045,17.039124797885,10.8694000489285,19.9201595469042,2.80238390812695,2.64748512234947,3.69497360744293,1.31517439456545,3.61461423993277,1.39300866608867,2.26360350048738,3.38358253591438,2.1066395619397,0.772043721344145,3.12579849335152,0.621377317606506,0.938104239924385,1.08037236876609,0.473489471170421,1.57411385397923,3.70241070929708,5.34828072925938,4.29237442239391,5.48797109125697,5.26591519723137,11.984224877774,11.4307021459657,11.9883989688773,10.7579556492615,18.788898626452,151.619052914736,91.0705819556667,3.30418782983798,2.11560453330835,8.53153002140936,21.1335371392999,18.8146493530256,12.9077455758939,10.4517680607089,12.935342575654,4.2707615539006,6.91735609840846,8.29406189040889,8.55512829776949,9.16331209459865,3.59527763461689,4.53889904736858,4.18196673834171,0.758671603812327,3.54170389090159,3.38123207019241,5.09128319613286,5.81857461502877,5.11991485199326,10.0546094027569,7.67572769493931,5.80895293013087,5.79966670432462,0.592905254174298,0.667380422864376,0.393117990226406,0.224862112384854,0.405720242777006,0.72353147925725,1.2731292589071,0.575392274901621,0,0.549122826376163,0,1.86070473834252,0.936113019343682,1.51547326768267,0.538192240565737,0.482443521363367,2.77129785249907,2.27389694124582,0.977789858652155,0.678980343100753,1.64283173801951,0.837531287209079,0.952174563544055,0.780534591431195,0.630540576424764,0.664394068946325,1.2756381492599,2.13022309130459,2.24490476425664,1.44649058581512,1.50791283939272,1.08781136763742,1.96705709207614,0.551873492609465,94.0826457328461,99.2782985435961,0,2.27223834483936,283.641889255215,330.311177674956,219.301018891989,51.8562291557038,29.8550223270408,15.5692091933858,330.730343268389,276.18178572619,251.798314551935,278.906902654129,5.25178315270594,3.5613120733451,2.11753047159649,3.46437258242324,39.8235415019888,10.4395673546642,25.3951787850391,57.9017594850607,22.147641966058,46.730142487477,25.5844010236539,42.1699126193906,48.1271460819374,54.3583223649604,53.7634903732494,42.2855727317566,70.8114379967879,5.40183282093931,1.29358683782755,3.00071849044229,7.44828981297549,12.8425548673491,19.7458824722545,8.52501857520878,1.40803024838226,3.38931313382112,3.30792597082443,0.98931751764888,0.645857706783622,1.44751019827574,1.79058516004705,1.14898629821543,3.78925087618806,76.024373824309,4.95525554313773,5.57244543500701,1.29636169158798,0.376736914009382,2.7338845544205,4.11800711771741,19.3775410192995,20.0130576822831,19.0715963850105,2.86401185404534,2.37251995185852,14.4356821660063,11.9885928312199,7.3180903605064,9.17122767733946,5.66430254816247,5.2898211664215,3.14107130380836,3.49960427887841,1.86401793926078,2.25477175473676,7.62534384824292,10.5893433892542,20.6118259644691,17.0490966990605,21.1195156863473,12.7919390123872,8.20287624516886,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| ||
|short_description=p1@Serpini1 | |short_description=p1@Serpini1 | ||
}} | }} |
Latest revision as of 16:51, 25 September 2015
Short description: | p1@Serpini1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Serpini1_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 0bp_to_ENSMUST00000029423, ENSMUST00000161776, NM_009250, uc008pnd.2, uc008pne.2_5end |
EntrezGene: | Serpini1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.22e-14 | 33 |
neuronal stem cell | 1.22e-14 | 33 |
neuroblast | 1.22e-14 | 33 |
electrically signaling cell | 1.22e-14 | 33 |
electrically responsive cell | 1.28e-11 | 39 |
electrically active cell | 1.28e-11 | 39 |
CNS neuron (sensu Vertebrata) | 1.17e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.17e-09 | 23 |
ectodermal cell | 1.72e-07 | 44 |
neurectodermal cell | 1.72e-07 | 44 |
neural cell | 2.58e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.34e-20 | 73 |
nervous system | 8.34e-20 | 75 |
neurectoderm | 4.61e-18 | 64 |
neural plate | 4.61e-18 | 64 |
presumptive neural plate | 4.61e-18 | 64 |
regional part of nervous system | 4.08e-17 | 54 |
neural tube | 5.21e-16 | 52 |
neural rod | 5.21e-16 | 52 |
future spinal cord | 5.21e-16 | 52 |
neural keel | 5.21e-16 | 52 |
gray matter | 9.18e-15 | 34 |
ectoderm-derived structure | 1.17e-14 | 95 |
ectoderm | 1.17e-14 | 95 |
presumptive ectoderm | 1.17e-14 | 95 |
structure with developmental contribution from neural crest | 4.54e-14 | 92 |
brain | 7.77e-14 | 47 |
future brain | 7.77e-14 | 47 |
ecto-epithelium | 1.07e-13 | 73 |
regional part of brain | 3.36e-13 | 46 |
anterior neural tube | 5.96e-13 | 40 |
pre-chordal neural plate | 6.49e-13 | 49 |
brain grey matter | 1.76e-12 | 29 |
regional part of telencephalon | 1.76e-12 | 29 |
telencephalon | 1.76e-12 | 29 |
regional part of forebrain | 2.17e-12 | 39 |
forebrain | 2.17e-12 | 39 |
future forebrain | 2.17e-12 | 39 |
cerebral cortex | 3.74e-09 | 21 |
cerebral hemisphere | 3.74e-09 | 21 |
pallium | 3.74e-09 | 21 |
occipital lobe | 9.94e-08 | 10 |
visual cortex | 9.94e-08 | 10 |
neocortex | 9.94e-08 | 10 |
regional part of cerebral cortex | 2.83e-07 | 17 |