FFCP PHASE1:Mm9::chr8:73993125..73993157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66498 | |EntrezGene=66498 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=735 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENSMUST00000098645,ENSMUST00000139904_5end | |association_with_transcript=15bp_to_ENSMUST00000098645,ENSMUST00000139904_5end | ||
|cluster_id=chr8:73993125..73993157,+ | |||
|description=CAGE_peak_2_at_Dda1_5end | |description=CAGE_peak_2_at_Dda1_5end | ||
|id=chr8:73993125..73993157,+ | |id=chr8:73993125..73993157,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.84e-19!43;CL:0000221!2.92e-18!44;CL:0000133!2.92e-18!44;CL:0000055!1.84e-17!50;CL:0000540!1.98e-15!33;CL:0000047!1.98e-15!33;CL:0000031!1.98e-15!33;CL:0000404!1.98e-15!33;CL:0000393!4.73e-15!39;CL:0000211!4.73e-15!39;CL:0000117!1.85e-13!23;CL:0000337!1.85e-13!23;CL:0002371!8.39e-12!118;CL:0000548!6.70e-11!115;CL:0000004!6.70e-11!115;CL:0000255!6.70e-11!115;CL:0002321!1.12e-10!70;CL:0000220!1.12e-10!70;CL:0000144!1.24e-10!121;CL:0000012!1.24e-10!121;CL:0000723!1.57e-09!91;CL:0000048!1.57e-09!91;CL:0000034!6.46e-09!97 | |ontology_enrichment_celltype=CL:0002319!5.84e-19!43;CL:0000221!2.92e-18!44;CL:0000133!2.92e-18!44;CL:0000055!1.84e-17!50;CL:0000540!1.98e-15!33;CL:0000047!1.98e-15!33;CL:0000031!1.98e-15!33;CL:0000404!1.98e-15!33;CL:0000393!4.73e-15!39;CL:0000211!4.73e-15!39;CL:0000117!1.85e-13!23;CL:0000337!1.85e-13!23;CL:0002371!8.39e-12!118;CL:0000548!6.70e-11!115;CL:0000004!6.70e-11!115;CL:0000255!6.70e-11!115;CL:0002321!1.12e-10!70;CL:0000220!1.12e-10!70;CL:0000144!1.24e-10!121;CL:0000012!1.24e-10!121;CL:0000723!1.57e-09!91;CL:0000048!1.57e-09!91;CL:0000034!6.46e-09!97 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.84e-19,43;CL:0000221,2.92e-18,44;CL:0000133,2.92e-18,44;CL:0000540,1.98e-15,33;CL:0000047,1.98e-15,33;CL:0000031,1.98e-15,33;CL:0000404,1.98e-15,33;CL:0000393,4.73e-15,39;CL:0000211,4.73e-15,39;CL:0000117,1.85e-13,23;CL:0000337,1.85e-13,23;CL:0002321,1.12e-10,70;CL:0000723,1.57e-09,91;CL:0000048,1.57e-09,91;CL:0000034,6.46e-09,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.55e-27!75;UBERON:0001016!6.55e-27!75;UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0001049!8.62e-19!52;UBERON:0005068!8.62e-19!52;UBERON:0006241!8.62e-19!52;UBERON:0007135!8.62e-19!52;UBERON:0007811!6.75e-18!86;UBERON:0000153!1.02e-16!94;UBERON:0000955!1.12e-16!50;UBERON:0006238!1.12e-16!50;UBERON:0002616!1.31e-16!49;UBERON:0004121!1.76e-16!102;UBERON:0000924!1.76e-16!102;UBERON:0006601!1.76e-16!102;UBERON:0002020!2.37e-16!34;UBERON:0002346!6.18e-15!71;UBERON:0003075!6.18e-15!71;UBERON:0007284!6.18e-15!71;UBERON:0003080!6.96e-14!40;UBERON:0002780!1.15e-13!39;UBERON:0001890!1.15e-13!39;UBERON:0006240!1.15e-13!39;UBERON:0000033!3.12e-13!63;UBERON:0002791!3.14e-13!29;UBERON:0003528!3.14e-13!29;UBERON:0001893!3.14e-13!29;UBERON:0003056!2.12e-12!49;UBERON:0000956!1.56e-09!21;UBERON:0001869!1.56e-09!21;UBERON:0000203!1.56e-09!21;UBERON:0002619!7.48e-08!17;UBERON:0000064!1.04e-07!99 | |ontology_enrichment_uberon=UBERON:0000073!6.55e-27!75;UBERON:0001016!6.55e-27!75;UBERON:0001017!1.12e-26!73;UBERON:0005743!1.12e-26!73;UBERON:0001049!8.62e-19!52;UBERON:0005068!8.62e-19!52;UBERON:0006241!8.62e-19!52;UBERON:0007135!8.62e-19!52;UBERON:0007811!6.75e-18!86;UBERON:0000153!1.02e-16!94;UBERON:0000955!1.12e-16!50;UBERON:0006238!1.12e-16!50;UBERON:0002616!1.31e-16!49;UBERON:0004121!1.76e-16!102;UBERON:0000924!1.76e-16!102;UBERON:0006601!1.76e-16!102;UBERON:0002020!2.37e-16!34;UBERON:0002346!6.18e-15!71;UBERON:0003075!6.18e-15!71;UBERON:0007284!6.18e-15!71;UBERON:0003080!6.96e-14!40;UBERON:0002780!1.15e-13!39;UBERON:0001890!1.15e-13!39;UBERON:0006240!1.15e-13!39;UBERON:0000033!3.12e-13!63;UBERON:0002791!3.14e-13!29;UBERON:0003528!3.14e-13!29;UBERON:0001893!3.14e-13!29;UBERON:0003056!2.12e-12!49;UBERON:0000956!1.56e-09!21;UBERON:0001869!1.56e-09!21;UBERON:0000203!1.56e-09!21;UBERON:0002619!7.48e-08!17;UBERON:0000064!1.04e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.55e-27,75;UBERON:0001017,1.12e-26,73;UBERON:0000073,8.93e-20,54;UBERON:0004121,1.97e-19,95;UBERON:0000924,1.97e-19,95;UBERON:0006601,1.97e-19,95;UBERON:0001049,8.62e-19,52;UBERON:0005068,8.62e-19,52;UBERON:0006241,8.62e-19,52;UBERON:0007135,8.62e-19,52;UBERON:0002346,1.39e-18,64;UBERON:0003075,1.39e-18,64;UBERON:0007284,1.39e-18,64;UBERON:0002020,2.37e-16,34;UBERON:0000955,1.62e-15,47;UBERON:0006238,1.62e-15,47;UBERON:0002616,1.88e-15,46;UBERON:0003080,6.96e-14,40;UBERON:0002780,1.15e-13,39;UBERON:0001890,1.15e-13,39;UBERON:0006240,1.15e-13,39;UBERON:0003528,3.14e-13,29;UBERON:0002791,3.14e-13,29;UBERON:0001893,3.14e-13,29;UBERON:0010371,3.65e-13,73;UBERON:0003056,2.12e-12,49;UBERON:0010314,5.02e-10,92;UBERON:0000956,1.56e-09,21;UBERON:0001869,1.56e-09,21;UBERON:0000203,1.56e-09,21;UBERON:0002619,7.48e-08,17 | |||
|phase1_expression=18.4171174170513,23.3813523118372,20.4749657725291,22.6848158480123,20.0358291978539,14.9412552001582,22.4268134971705,27.2450212461726,51.52867230751,42.1316147379588,20.7173741552861,18.6666852049087,35.9521532855532,35.317842577275,22.3183540416494,21.4623783433216,27.9824751251259,24.2905867325843,21.526966076101,31.8292238848523,54.2576191163825,31.0780677258771,32.6499736423669,20.3190376947626,23.8585652309857,21.8208146363708,23.26114779259,20.0388246397877,24.3229976904159,14.8697776558359,19.5122849376668,28.5763803056834,20.2971379902908,0,11.554064790051,16.6234645358492,13.8835162258411,48.1311375347444,36.7227611926186,32.4584721263755,59.4113802911324,47.1301384621327,43.2104214197727,22.2837367816772,21.086401693659,27.8991063285756,109.534788208725,44.6951570579915,50.308135846194,41.0247087046738,24.4976237844384,38.8131923785423,41.9456515144341,73.2615763431458,71.2518854182024,35.2445427369247,30.9456115133857,45.8948162126924,71.8223436051572,85.1675476627973,69.7214543856797,68.4465954779647,49.8005085822238,53.0940833196025,53.3987835786166,57.5488893106341,62.3168229878282,82.2227173388127,55.9923906465779,61.4277019409192,67.5143125937936,78.554020711046,71.1196701864196,62.9602707964864,63.258010872036,64.3453150627015,55.0579404996944,38.1785140874711,33.9470438496298,72.9331171147972,65.9625910373374,63.030517837368,43.5525478442154,34.3285192119325,39.1163514308634,66.5860603170489,58.087645766034,66.358202713807,24.2323818666189,37.4834938129656,21.4499721639242,11.185510400758,3.39985666853875,9.71465744948071,10.3964226791627,8.96053774194671,21.0666630197628,34.4269251607677,32.7330365799615,39.9273719196684,20.703982707172,33.3648841277226,48.4129955442627,85.3280043783997,29.8757636595475,31.4166233189122,32.8590889259609,17.127581957859,25.63485048107,21.8209944425292,26.3697696684527,18.8768596553528,20.2941637585331,18.5388847879726,13.6402900277418,18.7243221081216,28.1802263217186,16.4843266888699,34.4998115260451,18.4414208940046,18.3298460322127,16.0008833534623,18.6391761218122,29.2780797011547,30.1603257811375,28.8666472385708,14.4976300652164,16.197373736822,13.2153036155987,33.5531032266803,37.0575488283087,66.722460971931,30.2454317134561,29.1515621356577,38.4407882435186,34.3951477703646,12.8317598451399,16.9193480029727,27.2940579108369,19.3606507415556,22.5108366325477,33.565707247287,29.5301892880773,25.921228667743,22.3840082207869,24.725948014976,26.3301846012838,23.8007101079894,34.0597428833891,29.1223363458442,24.9850596312807,22.5771604400402,19.1852601965663,19.5021213252413,20.5782136407943,17.9130840136644,18.2575428701441,22.1319200118655,17.3339734631312,30.2403627901833,25.5633405379395,23.768192112854,18.4660893756464,23.8084720414359,22.5229984815572,18.6027155800326,19.5839583021722,13.8950757416932,23.8611782374547,20.8492679380451,16.2137619091711,16.3743985916372,17.564009223284,17.5810408576087,35.5390013073375,50.9377831277458,34.363553430315,26.709507233018,20.9022485524529,22.9914305141834,18.9435168143477,17.3447831176075,21.5706702529524,30.2458745518969,20.404749646414,25.1989400727737,20.3581519128218,18.7019083718682,23.5906545414135,24.268124033664,23.342909386467,21.9055400579804,30.5365320534461,20.9074778075804,25.9227792048085,21.1797380959127,19.0073437424273,13.2556699592702,15.492951595443,17.7132177575523,12.55989822731,15.6714398180687,13.3403682189217,21.35617353166,24.7664333842636,22.7110733508702,18.8659912891308,21.2235900582127,21.1339456978578,17.2617682470486,7.29608520487659,11.2570179407113,8.62609239164127,11.5363693777236,9.36113019343682,11.6186283855671,6.81710171383266,13.9908621195376,17.1820466854942,27.0972718831793,27.0521860893763,22.0668611507745,19.4792906079457,22.7808510120869,20.9478403979692,18.9279638422065,15.4482441224067,21.4820748959312,21.2074842314458,16.5501947862895,19.6860879327121,17.0685889126184,21.1107797514981,22.3001330365671,24.0964493779328,20.1433824802455,36.1238827472532,28.7168632150898,22.6230224619812,18.1779067587149,45.7486918153572,44.5100168498168,42.4384093533614,34.8894445010726,34.0881971346063,33.6861071638711,44.5291771842384,38.8700291022045,42.6910800182245,29.5615611108062,17.1747503102005,20.4775444217344,11.2392001953967,16.1670720513085,17.2568679841952,22.0930378901033,23.5812374432506,17.5402724172985,32.483208216885,28.2840336108413,24.0338312646446,16.3590178264877,16.0423820273125,22.1225730555071,20.0295356292498,18.5643977846736,29.6182457005796,26.10885863454,29.6231385862508,26.1491182738543,30.3251799528288,27.4687979107189,26.6569413375436,31.6643547079183,29.8033069240912,25.8435126453861,25.5812941743756,20.4458953647435,14.2088695492397,15.5607346314642,14.9215430003921,15.4292445760358,20.1121777274597,33.3765543618917,23.4093106693058,24.5600372876235,17.2230910453832,16.1996873024034,18.4537207423384,26.7670462651631,16.9978429993855,18.4735917067229,18.1041965683795,47.7335309007557,28.9447434126739,23.3817387195876,15.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|phase1_expression=18.4171174170513,23.3813523118372,20.4749657725291,22.6848158480123,20.0358291978539,14.9412552001582,22.4268134971705,27.2450212461726,51.52867230751,42.1316147379588,20.7173741552861,18.6666852049087,35.9521532855532,35.317842577275,22.3183540416494,21.4623783433216,27.9824751251259,24.2905867325843,21.526966076101,31.8292238848523,54.2576191163825,31.0780677258771,32.6499736423669,20.3190376947626,23.8585652309857,21.8208146363708,23.26114779259,20.0388246397877,24.3229976904159,14.8697776558359,19.5122849376668,28.5763803056834,20.2971379902908,0,11.554064790051,16.6234645358492,13.8835162258411,48.1311375347444,36.7227611926186,32.4584721263755,59.4113802911324,47.1301384621327,43.2104214197727,22.2837367816772,21.086401693659,27.8991063285756,109.534788208725,44.6951570579915,50.308135846194,41.0247087046738,24.4976237844384,38.8131923785423,41.9456515144341,73.2615763431458,71.2518854182024,35.2445427369247,30.9456115133857,45.8948162126924,71.8223436051572,85.1675476627973,69.7214543856797,68.4465954779647,49.8005085822238,53.0940833196025,53.3987835786166,57.5488893106341,62.3168229878282,82.2227173388127,55.9923906465779,61.4277019409192,67.5143125937936,78.554020711046,71.1196701864196,62.9602707964864,63.258010872036,64.3453150627015,55.0579404996944,38.1785140874711,33.9470438496298,72.9331171147972,65.9625910373374,63.030517837368,43.5525478442154,34.3285192119325,39.1163514308634,66.5860603170489,58.087645766034,66.358202713807,24.2323818666189,37.4834938129656,21.4499721639242,11.185510400758,3.39985666853875,9.71465744948071,10.3964226791627,8.96053774194671,21.0666630197628,34.4269251607677,32.7330365799615,39.9273719196684,20.703982707172,33.3648841277226,48.4129955442627,85.3280043783997,29.8757636595475,31.4166233189122,32.8590889259609,17.127581957859,25.63485048107,21.8209944425292,26.3697696684527,18.8768596553528,20.2941637585331,18.5388847879726,13.6402900277418,18.7243221081216,28.1802263217186,16.4843266888699,34.4998115260451,18.4414208940046,18.3298460322127,16.0008833534623,18.6391761218122,29.2780797011547,30.1603257811375,28.8666472385708,14.4976300652164,16.197373736822,13.2153036155987,33.5531032266803,37.0575488283087,66.722460971931,30.2454317134561,29.1515621356577,38.4407882435186,34.3951477703646,12.8317598451399,16.9193480029727,27.2940579108369,19.3606507415556,22.5108366325477,33.565707247287,29.5301892880773,25.921228667743,22.3840082207869,24.725948014976,26.3301846012838,23.8007101079894,34.0597428833891,29.1223363458442,24.9850596312807,22.5771604400402,19.1852601965663,19.5021213252413,20.5782136407943,17.9130840136644,18.2575428701441,22.1319200118655,17.3339734631312,30.2403627901833,25.5633405379395,23.768192112854,18.4660893756464,23.8084720414359,22.5229984815572,18.6027155800326,19.5839583021722,13.8950757416932,23.8611782374547,20.8492679380451,16.2137619091711,16.3743985916372,17.564009223284,17.5810408576087,35.5390013073375,50.9377831277458,34.363553430315,26.709507233018,20.9022485524529,22.9914305141834,18.9435168143477,17.3447831176075,21.5706702529524,30.2458745518969,20.404749646414,25.1989400727737,20.3581519128218,18.7019083718682,23.5906545414135,24.268124033664,23.342909386467,21.9055400579804,30.5365320534461,20.9074778075804,25.9227792048085,21.1797380959127,19.0073437424273,13.2556699592702,15.492951595443,17.7132177575523,12.55989822731,15.6714398180687,13.3403682189217,21.35617353166,24.7664333842636,22.7110733508702,18.8659912891308,21.2235900582127,21.1339456978578,17.2617682470486,7.29608520487659,11.2570179407113,8.62609239164127,11.5363693777236,9.36113019343682,11.6186283855671,6.81710171383266,13.9908621195376,17.1820466854942,27.0972718831793,27.0521860893763,22.0668611507745,19.4792906079457,22.7808510120869,20.9478403979692,18.9279638422065,15.4482441224067,21.4820748959312,21.2074842314458,16.5501947862895,19.6860879327121,17.0685889126184,21.1107797514981,22.3001330365671,24.0964493779328,20.1433824802455,36.1238827472532,28.7168632150898,22.6230224619812,18.1779067587149,45.7486918153572,44.5100168498168,42.4384093533614,34.8894445010726,34.0881971346063,33.6861071638711,44.5291771842384,38.8700291022045,42.6910800182245,29.5615611108062,17.1747503102005,20.4775444217344,11.2392001953967,16.1670720513085,17.2568679841952,22.0930378901033,23.5812374432506,17.5402724172985,32.483208216885,28.2840336108413,24.0338312646446,16.3590178264877,16.0423820273125,22.1225730555071,20.0295356292498,18.5643977846736,29.6182457005796,26.10885863454,29.6231385862508,26.1491182738543,30.3251799528288,27.4687979107189,26.6569413375436,31.6643547079183,29.8033069240912,25.8435126453861,25.5812941743756,20.4458953647435,14.2088695492397,15.5607346314642,14.9215430003921,15.4292445760358,20.1121777274597,33.3765543618917,23.4093106693058,24.5600372876235,17.2230910453832,16.1996873024034,18.4537207423384,26.7670462651631,16.9978429993855,18.4735917067229,18.1041965683795,47.7335309007557,28.9447434126739,23.3817387195876,15.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| ||
|short_description=p2@Dda1 | |short_description=p2@Dda1 | ||
}} | }} |
Latest revision as of 18:15, 25 September 2015
Short description: | p2@Dda1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dda1_5end |
Coexpression cluster: | MCL_coexpression_mm9:735 |
Association with transcript: | 15bp_to_ENSMUST00000098645, ENSMUST00000139904_5end |
EntrezGene: | Dda1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.84e-19 | 43 |
ectodermal cell | 2.92e-18 | 44 |
neurectodermal cell | 2.92e-18 | 44 |
neuron | 1.98e-15 | 33 |
neuronal stem cell | 1.98e-15 | 33 |
neuroblast | 1.98e-15 | 33 |
electrically signaling cell | 1.98e-15 | 33 |
electrically responsive cell | 4.73e-15 | 39 |
electrically active cell | 4.73e-15 | 39 |
CNS neuron (sensu Vertebrata) | 1.85e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.85e-13 | 23 |
embryonic cell | 1.12e-10 | 70 |
somatic stem cell | 1.57e-09 | 91 |
multi fate stem cell | 1.57e-09 | 91 |
stem cell | 6.46e-09 | 97 |
Ontology term | p-value | n |
---|---|---|
nervous system | 6.55e-27 | 75 |
central nervous system | 1.12e-26 | 73 |
regional part of nervous system | 8.93e-20 | 54 |
ectoderm-derived structure | 1.97e-19 | 95 |
ectoderm | 1.97e-19 | 95 |
presumptive ectoderm | 1.97e-19 | 95 |
neural tube | 8.62e-19 | 52 |
neural rod | 8.62e-19 | 52 |
future spinal cord | 8.62e-19 | 52 |
neural keel | 8.62e-19 | 52 |
neurectoderm | 1.39e-18 | 64 |
neural plate | 1.39e-18 | 64 |
presumptive neural plate | 1.39e-18 | 64 |
gray matter | 2.37e-16 | 34 |
brain | 1.62e-15 | 47 |
future brain | 1.62e-15 | 47 |
regional part of brain | 1.88e-15 | 46 |
anterior neural tube | 6.96e-14 | 40 |
regional part of forebrain | 1.15e-13 | 39 |
forebrain | 1.15e-13 | 39 |
future forebrain | 1.15e-13 | 39 |
brain grey matter | 3.14e-13 | 29 |
regional part of telencephalon | 3.14e-13 | 29 |
telencephalon | 3.14e-13 | 29 |
ecto-epithelium | 3.65e-13 | 73 |
pre-chordal neural plate | 2.12e-12 | 49 |
structure with developmental contribution from neural crest | 5.02e-10 | 92 |
cerebral cortex | 1.56e-09 | 21 |
cerebral hemisphere | 1.56e-09 | 21 |
pallium | 1.56e-09 | 21 |
regional part of cerebral cortex | 7.48e-08 | 17 |