FFCP PHASE1:Mm9::chr11:78510872..78510977,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18099 | |EntrezGene=18099 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3X8T1,O54949,Q3TV73 | |UniProt=G3X8T1,O54949,Q3TV73 | ||
|association_with_transcript=0bp_to_ENSMUST00000017520,ENSMUST00000142739,NM_008702,uc007kjw.1,uc007kjx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000017520,ENSMUST00000142739,NM_008702,uc007kjw.1,uc007kjx.1_5end | ||
|cluster_id=chr11:78510872..78510977,- | |||
|description=CAGE_peak_1_at_Nlk_5end | |description=CAGE_peak_1_at_Nlk_5end | ||
|id=chr11:78510872..78510977,- | |id=chr11:78510872..78510977,- | ||
|ontology_enrichment_celltype=CL:0000117!8.22e-08!23;CL:0000337!8.22e-08!23 | |ontology_enrichment_celltype=CL:0000117!8.22e-08!23;CL:0000337!8.22e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.22e-08,23;CL:0000337,8.22e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.97e-18!86;UBERON:0000153!6.11e-18!94;UBERON:0000033!1.30e-15!63;UBERON:0002346!3.90e-15!71;UBERON:0003075!3.90e-15!71;UBERON:0007284!3.90e-15!71;UBERON:0004121!2.93e-14!102;UBERON:0000924!2.93e-14!102;UBERON:0006601!2.93e-14!102;UBERON:0003056!1.47e-13!49;UBERON:0000475!3.58e-12!200;UBERON:0002020!8.45e-12!34;UBERON:0001049!2.55e-11!52;UBERON:0005068!2.55e-11!52;UBERON:0006241!2.55e-11!52;UBERON:0007135!2.55e-11!52;UBERON:0000955!6.77e-10!50;UBERON:0006238!6.77e-10!50;UBERON:0002791!1.82e-09!29;UBERON:0003528!1.82e-09!29;UBERON:0001893!1.82e-09!29;UBERON:0002616!2.09e-09!49;UBERON:0000483!3.23e-09!181;UBERON:0003080!5.73e-09!40;UBERON:0002780!9.04e-09!39;UBERON:0001890!9.04e-09!39;UBERON:0006240!9.04e-09!39;UBERON:0000073!9.19e-09!75;UBERON:0001016!9.19e-09!75;UBERON:0000477!1.40e-08!154;UBERON:0000119!1.61e-08!183;UBERON:0000956!2.20e-08!21;UBERON:0001869!2.20e-08!21;UBERON:0000203!2.20e-08!21;UBERON:0001017!3.23e-08!73;UBERON:0005743!3.23e-08!73;UBERON:0002021!6.12e-08!10;UBERON:0000411!6.12e-08!10;UBERON:0001950!6.12e-08!10;UBERON:0000062!6.94e-08!269;UBERON:0002619!2.94e-07!17;UBERON:0000468!5.59e-07!333;UBERON:0000020!8.04e-07!12;UBERON:0001032!8.04e-07!12;UBERON:0004456!8.04e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,9.99e-15,73;UBERON:0002346,1.68e-14,64;UBERON:0003075,1.68e-14,64;UBERON:0007284,1.68e-14,64;UBERON:0010314,6.75e-14,92;UBERON:0003056,1.47e-13,49;UBERON:0004121,2.11e-13,95;UBERON:0000924,2.11e-13,95;UBERON:0006601,2.11e-13,95;UBERON:0002020,8.45e-12,34;UBERON:0000073,1.41e-11,54;UBERON:0001049,2.55e-11,52;UBERON:0005068,2.55e-11,52;UBERON:0006241,2.55e-11,52;UBERON:0007135,2.55e-11,52;UBERON:0003528,1.82e-09,29;UBERON:0002791,1.82e-09,29;UBERON:0001893,1.82e-09,29;UBERON:0000955,2.78e-09,47;UBERON:0006238,2.78e-09,47;UBERON:0003080,5.73e-09,40;UBERON:0002616,8.45e-09,46;UBERON:0002780,9.04e-09,39;UBERON:0001890,9.04e-09,39;UBERON:0006240,9.04e-09,39;UBERON:0001016,9.19e-09,75;UBERON:0000956,2.20e-08,21;UBERON:0001869,2.20e-08,21;UBERON:0000203,2.20e-08,21;UBERON:0000483,2.65e-08,174;UBERON:0007811,2.82e-08,36;UBERON:0001017,3.23e-08,73;UBERON:0002021,6.12e-08,10;UBERON:0000411,6.12e-08,10;UBERON:0001950,6.12e-08,10;UBERON:0000119,1.21e-07,176;UBERON:0000153,2.81e-07,43;UBERON:0002619,2.94e-07,17;UBERON:0000033,4.24e-07,13;UBERON:0000020,8.04e-07,12;UBERON:0001032,8.04e-07,12;UBERON:0004456,8.04e-07,12 | |||
|phase1_expression=14.0930985452219,8.72438519098403,8.64498554840118,10.5862473957391,10.0179145989269,10.7442734023609,7.70921713965235,21.950964985068,15.4867594366833,14.2779361056416,7.87602653837323,11.0883301003518,30.4737299277546,34.093956943409,10.3264026162855,6.68168382386426,9.79386629379405,15.4576461025536,14.3970155286026,10.1853516431527,4.59233766815777,8.63831275447702,10.4479915655574,7.03966660290989,6.42345986988076,4.59385571292016,9.47676391549965,6.67960821326256,6.65081968097309,5.04060259519861,7.53883736228036,10.1604907753541,6.76571266343027,0,7.51014211353314,5.65197794218874,5.51257261908397,7.11503772252743,4.6880120671428,4.71171369576418,8.2352408324342,4.78131839470912,6.79714494243615,4.28049181116963,5.06884656097573,8.81024410376071,10.1710874765245,2.39827672018491,6.15121311656521,4.27745777963423,3.91961980551015,2.87505128729943,8.55691290894455,44.247090662692,47.053131879945,7.20326420900652,4.87106847895886,11.3447860301037,21.647861311977,18.5146842745212,16.4796164911607,4.74382344896785,6.22506357277798,6.29929802096979,6.92206453796882,4.9733608046227,8.98800331555214,9.22123932771731,17.5235444801327,13.9056116481641,12.4091727197315,19.1386159550548,17.8903518170807,26.4580126304301,19.456630616702,18.3843757322004,13.2139057199266,18.6423513604374,12.1349161272432,19.7829431595291,17.4741399280602,16.6692278578163,16.4717969410815,6.75315132038016,10.5430790965999,18.5616008848411,20.5015220350708,19.5719418116566,16.8869411133,14.7364542208232,13.0439019915755,4.30211938490693,2.719885334831,2.15881276655127,6.49776417447669,4.03224198387602,5.05599912474307,3.40860645156115,2.85764605063156,2.12003744706204,17.0420537929783,6.41632387071589,7.64415719119937,21.3320010945999,4.5463118612355,5.57391704045217,6.0662933401774,5.82337786567206,17.0899003207133,20.336573051881,6.59244241711316,8.52503339273995,13.3756988408514,15.976599898578,14.345822270556,18.3473223341326,9.14621380617183,10.4111536982336,11.4999371753484,6.14714029800155,9.05450225687614,8.727754556434,5.59175283654366,14.9318206475889,15.9179497178226,10.7291963187608,5.51149572727233,2.99951365496704,4.3203877204842,14.0803201040533,12.8100168789215,23.6230181972185,43.2822557278768,36.3115949409069,14.9607392082883,16.3863675698435,9.26738211037878,8.9573018839267,14.1524744722858,27.1469994093551,16.1349349273753,19.3117767724117,21.6074555766419,23.9620660358787,36.1954175485064,40.3558218897277,53.0351761008065,36.2184719034622,6.68260778091811,12.8592134514117,11.4368230706567,8.54863356467542,11.3999372182495,11.1440693287093,10.4948889568051,11.3449532086541,1.40442637462647,3.08817488537658,2.27330799516474,11.5990432619881,11.4917769390737,10.4435995647389,12.0739815148457,11.215561209602,13.1127045954272,8.60375595576509,10.4626626545851,10.7424114977796,13.1647879930784,13.4617320544858,12.2413902414242,10.5263990946239,6.36695334344047,8.85762363818454,16.1923260394378,15.6415010816512,3.30418782983798,8.19796756656987,12.5840067815788,9.75394021813842,12.6290112095651,13.3111126251406,10.0070119730192,9.51128130562796,8.54152310780121,7.5761519173045,8.29406189040889,10.7436494902221,10.1381325301942,10.7858329038507,6.05186539649144,5.97423819763102,12.8974172648096,11.4248512609729,16.9061603509621,10.7935203758017,11.4431967428899,13.6063490587218,14.4811670014549,13.2849133181642,12.0889020437859,6.91024117962083,6.81841042300442,11.1786220829783,12.7763346823582,10.793381394473,12.1716072833102,10.6117950291063,6.87489799809833,11.7955416354832,9.72811360650212,7.96228098245436,2.87536413054709,10.0478055870496,7.80094182786401,5.55673531483646,6.45830688678884,10.1313139486307,10.7156850296631,7.95863929436036,15.4816727619925,9.16623463186016,10.0916806764056,16.2481069718561,18.5674039891091,17.7571619550597,14.029527825451,18.6030339304971,20.7291199254733,14.5838350097007,17.0958132047237,14.0309586824066,3.01582567878545,5.4390568381871,9.34352118736169,7.45029215022778,13.6468001489623,12.8932855251423,4.42624352517024,7.82659874333556,8.51872192423893,8.19921363022941,7.53981892064796,8.36390792833932,6.90675889655422,5.94460714656548,10.1202675418724,8.47541987942804,3.95287777946523,29.2402397943844,15.4714692877013,8.369083372361,7.4928001302645,11.0529982391599,9.2921596837974,6.31229654002952,6.95344181018927,9.9960692270626,6.496641643377,9.22305443831782,12.4045580720746,12.7236805317127,7.48644494607915,7.9009189483954,10.5418608574999,14.4389760547462,16.000661470428,12.784337676223,10.9954881215341,9.64516657642165,16.847322196016,10.5237602385222,6.2528627828806,6.69822888052118,13.6109590676952,13.9809166770121,12.1290618930229,16.818397800031,8.88054346827481,11.7610203609904,12.1759790883199,14.9368218768006,9.32738677215522,17.0591277849669,9.91051108627546,5.98521917093345,8.88933731374616,8.85331747922048,11.4823151285661,8.92234875505438,6.28920190977265,4.89830083132803,5.66619892598138,2.86401185404534,13.2861117304077,12.4024874947378,9.93649135560572,8.15444354456428,7.86105229486239,7.95699643670442,8.5133059397096,6.28214260761671,6.73997861117323,16.1548221402601,10.1464728963154,11.8118071374743,9.10021697514037,9.33365704051429,9.29950729039664,9.12363077650202,8.56707842114004,12.8902340995511,14.156011497471,11.3544536788223,10.657110231541,16.7485893932934,4.05450430580328,8.62772040184549,8.18501184760109,13.6060288707286,17.4839592207513,17.5485356299155,15.8027794076798,13.9333700928444,15.165154524345,16.5354943624418,19.8814076709095,16.2598012372157,19.6353195665036,13.3770926332975,9.10142408833665,10.1376657968708,7.38692312001945,13.5232715822533,12.1993609043268,10.0733393346996,11.5758924702696,8.52672576860118,43.4858918815141,40.9689460491387,34.3737308063638,35.0580491981123,45.900528824633,43.8128460486026,38.4762825132129,53.137901980458,43.0485288534994,52.8115517986856,12.6620564052696,15.9609949360412,17.75629499843,12.6415492875513,10.4806581313991,10.1113929647508,8.00088220085815,9.06554251851134,8.3438994493872,7.58091635291392,8.87177549615839,7.1678009726709,9.36415074698824,10.8202507564229,10.7978681636553,5.71552429539688,9.96605203125757,11.767462448286,14.0109206273124,11.1871179302142,8.9146005620208,6.21165321557681,9.53744759789284,9.73820991436601,8.28162547654909,8.03838774970927,9.51225458938417,7.62902163169744,9.50628796921032,14.5896990631012,11.6262317761691,12.3130602969454,5.72923460437565,11.3103894065755,11.9602098808308,17.7365510335942,10.0590591631526,14.396360621236,8.22539827896026,9.04424818390014,5.10109238364927 | |phase1_expression=14.0930985452219,8.72438519098403,8.64498554840118,10.5862473957391,10.0179145989269,10.7442734023609,7.70921713965235,21.950964985068,15.4867594366833,14.2779361056416,7.87602653837323,11.0883301003518,30.4737299277546,34.093956943409,10.3264026162855,6.68168382386426,9.79386629379405,15.4576461025536,14.3970155286026,10.1853516431527,4.59233766815777,8.63831275447702,10.4479915655574,7.03966660290989,6.42345986988076,4.59385571292016,9.47676391549965,6.67960821326256,6.65081968097309,5.04060259519861,7.53883736228036,10.1604907753541,6.76571266343027,0,7.51014211353314,5.65197794218874,5.51257261908397,7.11503772252743,4.6880120671428,4.71171369576418,8.2352408324342,4.78131839470912,6.79714494243615,4.28049181116963,5.06884656097573,8.81024410376071,10.1710874765245,2.39827672018491,6.15121311656521,4.27745777963423,3.91961980551015,2.87505128729943,8.55691290894455,44.247090662692,47.053131879945,7.20326420900652,4.87106847895886,11.3447860301037,21.647861311977,18.5146842745212,16.4796164911607,4.74382344896785,6.22506357277798,6.29929802096979,6.92206453796882,4.9733608046227,8.98800331555214,9.22123932771731,17.5235444801327,13.9056116481641,12.4091727197315,19.1386159550548,17.8903518170807,26.4580126304301,19.456630616702,18.3843757322004,13.2139057199266,18.6423513604374,12.1349161272432,19.7829431595291,17.4741399280602,16.6692278578163,16.4717969410815,6.75315132038016,10.5430790965999,18.5616008848411,20.5015220350708,19.5719418116566,16.8869411133,14.7364542208232,13.0439019915755,4.30211938490693,2.719885334831,2.15881276655127,6.49776417447669,4.03224198387602,5.05599912474307,3.40860645156115,2.85764605063156,2.12003744706204,17.0420537929783,6.41632387071589,7.64415719119937,21.3320010945999,4.5463118612355,5.57391704045217,6.0662933401774,5.82337786567206,17.0899003207133,20.336573051881,6.59244241711316,8.52503339273995,13.3756988408514,15.976599898578,14.345822270556,18.3473223341326,9.14621380617183,10.4111536982336,11.4999371753484,6.14714029800155,9.05450225687614,8.727754556434,5.59175283654366,14.9318206475889,15.9179497178226,10.7291963187608,5.51149572727233,2.99951365496704,4.3203877204842,14.0803201040533,12.8100168789215,23.6230181972185,43.2822557278768,36.3115949409069,14.9607392082883,16.3863675698435,9.26738211037878,8.9573018839267,14.1524744722858,27.1469994093551,16.1349349273753,19.3117767724117,21.6074555766419,23.9620660358787,36.1954175485064,40.3558218897277,53.0351761008065,36.2184719034622,6.68260778091811,12.8592134514117,11.4368230706567,8.54863356467542,11.3999372182495,11.1440693287093,10.4948889568051,11.3449532086541,1.40442637462647,3.08817488537658,2.27330799516474,11.5990432619881,11.4917769390737,10.4435995647389,12.0739815148457,11.215561209602,13.1127045954272,8.60375595576509,10.4626626545851,10.7424114977796,13.1647879930784,13.4617320544858,12.2413902414242,10.5263990946239,6.36695334344047,8.85762363818454,16.1923260394378,15.6415010816512,3.30418782983798,8.19796756656987,12.5840067815788,9.75394021813842,12.6290112095651,13.3111126251406,10.0070119730192,9.51128130562796,8.54152310780121,7.5761519173045,8.29406189040889,10.7436494902221,10.1381325301942,10.7858329038507,6.05186539649144,5.97423819763102,12.8974172648096,11.4248512609729,16.9061603509621,10.7935203758017,11.4431967428899,13.6063490587218,14.4811670014549,13.2849133181642,12.0889020437859,6.91024117962083,6.81841042300442,11.1786220829783,12.7763346823582,10.793381394473,12.1716072833102,10.6117950291063,6.87489799809833,11.7955416354832,9.72811360650212,7.96228098245436,2.87536413054709,10.0478055870496,7.80094182786401,5.55673531483646,6.45830688678884,10.1313139486307,10.7156850296631,7.95863929436036,15.4816727619925,9.16623463186016,10.0916806764056,16.2481069718561,18.5674039891091,17.7571619550597,14.029527825451,18.6030339304971,20.7291199254733,14.5838350097007,17.0958132047237,14.0309586824066,3.01582567878545,5.4390568381871,9.34352118736169,7.45029215022778,13.6468001489623,12.8932855251423,4.42624352517024,7.82659874333556,8.51872192423893,8.19921363022941,7.53981892064796,8.36390792833932,6.90675889655422,5.94460714656548,10.1202675418724,8.47541987942804,3.95287777946523,29.2402397943844,15.4714692877013,8.369083372361,7.4928001302645,11.0529982391599,9.2921596837974,6.31229654002952,6.95344181018927,9.9960692270626,6.496641643377,9.22305443831782,12.4045580720746,12.7236805317127,7.48644494607915,7.9009189483954,10.5418608574999,14.4389760547462,16.000661470428,12.784337676223,10.9954881215341,9.64516657642165,16.847322196016,10.5237602385222,6.2528627828806,6.69822888052118,13.6109590676952,13.9809166770121,12.1290618930229,16.818397800031,8.88054346827481,11.7610203609904,12.1759790883199,14.9368218768006,9.32738677215522,17.0591277849669,9.91051108627546,5.98521917093345,8.88933731374616,8.85331747922048,11.4823151285661,8.92234875505438,6.28920190977265,4.89830083132803,5.66619892598138,2.86401185404534,13.2861117304077,12.4024874947378,9.93649135560572,8.15444354456428,7.86105229486239,7.95699643670442,8.5133059397096,6.28214260761671,6.73997861117323,16.1548221402601,10.1464728963154,11.8118071374743,9.10021697514037,9.33365704051429,9.29950729039664,9.12363077650202,8.56707842114004,12.8902340995511,14.156011497471,11.3544536788223,10.657110231541,16.7485893932934,4.05450430580328,8.62772040184549,8.18501184760109,13.6060288707286,17.4839592207513,17.5485356299155,15.8027794076798,13.9333700928444,15.165154524345,16.5354943624418,19.8814076709095,16.2598012372157,19.6353195665036,13.3770926332975,9.10142408833665,10.1376657968708,7.38692312001945,13.5232715822533,12.1993609043268,10.0733393346996,11.5758924702696,8.52672576860118,43.4858918815141,40.9689460491387,34.3737308063638,35.0580491981123,45.900528824633,43.8128460486026,38.4762825132129,53.137901980458,43.0485288534994,52.8115517986856,12.6620564052696,15.9609949360412,17.75629499843,12.6415492875513,10.4806581313991,10.1113929647508,8.00088220085815,9.06554251851134,8.3438994493872,7.58091635291392,8.87177549615839,7.1678009726709,9.36415074698824,10.8202507564229,10.7978681636553,5.71552429539688,9.96605203125757,11.767462448286,14.0109206273124,11.1871179302142,8.9146005620208,6.21165321557681,9.53744759789284,9.73820991436601,8.28162547654909,8.03838774970927,9.51225458938417,7.62902163169744,9.50628796921032,14.5896990631012,11.6262317761691,12.3130602969454,5.72923460437565,11.3103894065755,11.9602098808308,17.7365510335942,10.0590591631526,14.396360621236,8.22539827896026,9.04424818390014,5.10109238364927 | ||
|short_description=p1@Nlk | |short_description=p1@Nlk | ||
}} | }} |
Latest revision as of 18:17, 25 September 2015
Short description: | p1@Nlk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlk_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000017520, ENSMUST00000142739, NM_008702, uc007kjw.1, uc007kjx.1_5end |
EntrezGene: | Nlk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.22e-08 | 23 |
neuroblast (sensu Vertebrata) | 8.22e-08 | 23 |