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FFCP PHASE1:Mm9::chr5:151062311..151062323,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320365
|EntrezGene=320365
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|association_with_transcript=-181bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|association_with_transcript=-181bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|cluster_id=chr5:151062311..151062323,+
|description=CAGE_peak_9_at_Fry_5end
|description=CAGE_peak_9_at_Fry_5end
|id=chr5:151062311..151062323,+
|id=chr5:151062311..151062323,+
|ontology_enrichment_celltype=CL:0000117!2.12e-09!23;CL:0000337!2.12e-09!23
|ontology_enrichment_celltype=CL:0000117!2.12e-09!23;CL:0000337!2.12e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-12,23;CL:0000337,1.24e-12,23;CL:0000540,5.86e-08,33;CL:0000047,5.86e-08,33;CL:0000031,5.86e-08,33;CL:0000404,5.86e-08,33;CL:0002610,8.50e-08,3;CL:0002614,3.33e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.12e-15!52;UBERON:0005068!1.12e-15!52;UBERON:0006241!1.12e-15!52;UBERON:0007135!1.12e-15!52;UBERON:0002020!3.31e-15!34;UBERON:0000955!4.96e-15!50;UBERON:0006238!4.96e-15!50;UBERON:0001017!9.71e-15!73;UBERON:0005743!9.71e-15!73;UBERON:0002616!2.30e-14!49;UBERON:0000073!9.85e-14!75;UBERON:0001016!9.85e-14!75;UBERON:0004121!2.86e-13!102;UBERON:0000924!2.86e-13!102;UBERON:0006601!2.86e-13!102;UBERON:0002791!1.55e-12!29;UBERON:0003528!1.55e-12!29;UBERON:0001893!1.55e-12!29;UBERON:0000033!1.74e-12!63;UBERON:0002346!3.78e-11!71;UBERON:0003075!3.78e-11!71;UBERON:0007284!3.78e-11!71;UBERON:0003080!4.88e-11!40;UBERON:0002780!2.25e-10!39;UBERON:0001890!2.25e-10!39;UBERON:0006240!2.25e-10!39;UBERON:0000956!2.96e-09!21;UBERON:0001869!2.96e-09!21;UBERON:0000203!2.96e-09!21;UBERON:0003056!7.82e-09!49;UBERON:0002021!2.50e-07!10;UBERON:0000411!2.50e-07!10;UBERON:0001950!2.50e-07!10;UBERON:0002619!6.78e-07!17
|ontology_enrichment_uberon=UBERON:0001049!1.12e-15!52;UBERON:0005068!1.12e-15!52;UBERON:0006241!1.12e-15!52;UBERON:0007135!1.12e-15!52;UBERON:0002020!3.31e-15!34;UBERON:0000955!4.96e-15!50;UBERON:0006238!4.96e-15!50;UBERON:0001017!9.71e-15!73;UBERON:0005743!9.71e-15!73;UBERON:0002616!2.30e-14!49;UBERON:0000073!9.85e-14!75;UBERON:0001016!9.85e-14!75;UBERON:0004121!2.86e-13!102;UBERON:0000924!2.86e-13!102;UBERON:0006601!2.86e-13!102;UBERON:0002791!1.55e-12!29;UBERON:0003528!1.55e-12!29;UBERON:0001893!1.55e-12!29;UBERON:0000033!1.74e-12!63;UBERON:0002346!3.78e-11!71;UBERON:0003075!3.78e-11!71;UBERON:0007284!3.78e-11!71;UBERON:0003080!4.88e-11!40;UBERON:0002780!2.25e-10!39;UBERON:0001890!2.25e-10!39;UBERON:0006240!2.25e-10!39;UBERON:0000956!2.96e-09!21;UBERON:0001869!2.96e-09!21;UBERON:0000203!2.96e-09!21;UBERON:0003056!7.82e-09!49;UBERON:0002021!2.50e-07!10;UBERON:0000411!2.50e-07!10;UBERON:0001950!2.50e-07!10;UBERON:0002619!6.78e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.89e-37,54;UBERON:0001049,2.00e-33,52;UBERON:0005068,2.00e-33,52;UBERON:0006241,2.00e-33,52;UBERON:0007135,2.00e-33,52;UBERON:0000955,1.57e-32,47;UBERON:0006238,1.57e-32,47;UBERON:0001017,1.69e-31,73;UBERON:0002616,9.95e-31,46;UBERON:0001016,1.90e-30,75;UBERON:0002346,8.44e-26,64;UBERON:0003075,8.44e-26,64;UBERON:0007284,8.44e-26,64;UBERON:0003080,3.94e-25,40;UBERON:0002020,7.07e-25,34;UBERON:0003528,1.29e-24,29;UBERON:0002791,1.29e-24,29;UBERON:0001893,1.29e-24,29;UBERON:0004121,3.81e-24,95;UBERON:0000924,3.81e-24,95;UBERON:0006601,3.81e-24,95;UBERON:0002780,2.57e-23,39;UBERON:0001890,2.57e-23,39;UBERON:0006240,2.57e-23,39;UBERON:0010371,1.00e-21,73;UBERON:0003056,1.91e-19,49;UBERON:0000956,3.44e-19,21;UBERON:0001869,3.44e-19,21;UBERON:0000203,3.44e-19,21;UBERON:0010314,9.52e-16,92;UBERON:0002619,7.33e-13,17;UBERON:0002021,3.77e-12,10;UBERON:0000411,3.77e-12,10;UBERON:0001950,3.77e-12,10;UBERON:0000025,2.52e-11,114;UBERON:0004111,3.45e-11,122;UBERON:0002950,2.07e-09,4;UBERON:0001891,2.07e-09,4;UBERON:0009616,2.07e-09,4;UBERON:0010286,2.07e-09,4;UBERON:0003076,1.68e-08,12;UBERON:0003057,1.68e-08,12;UBERON:0004684,8.50e-08,3;UBERON:0002275,8.50e-08,3;UBERON:0011216,1.17e-07,194;UBERON:0002038,3.33e-07,3;UBERON:0009663,3.33e-07,3;UBERON:0009661,3.33e-07,3;UBERON:0000125,3.33e-07,3;UBERON:0002308,3.33e-07,3
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,1.45165457231869,1.62007125998029,1.26194976810829,1.99955689082663,1.10434270475807,0.857435594504678,1.15014565221884,0,4.40463523997555,2.29837208553338,3.22573719838111,0.791317726381163,0.823388792421687,0,4.18774498502071,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,5.27005434620785,3.56059401582874,0.766371165625774,0,0,0,4.19413790333504,2.74500361691176,1.38219787324151,3.30266208365325,3.58001640262463,1.24672826735736,2.27137768294861,0.203678727700633,0.497627882440372,0.252722758433675,0,0,0,0,0,0.408218994907967,0,0.374806898238915,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,3.99550902271842,2.57261530948211,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0.275936746304732,2.72936002979246,2.69586879162067,0,0,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,2.89189184779626,0.141940085208269,0,0.325773918707152,0.164970122972535,6.63725691699814,0,0.302323556964751,0,0,0,0.258428293168221,0,0,1.26414703174326,3.16255825724996,3.09406629744561,2.04263763452273,0,0,0,0,0.535106452806212,0,0,0,0.21183207086382,0.882113592219848,0.8244312647074,0.645857706783622,0.542816324353403,0.716234064018819,0.656563598980245,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0.134864346384821,0.495920734352016,0.523511883968059,0.259229946583586,4.34937519160848,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,2.25900737046827,2.30162618253588,1.71868654031819,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,1.03552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0,0.192075457214608,0.0574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.956441660344217,0.661774257358546,0
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,1.45165457231869,1.62007125998029,1.26194976810829,1.99955689082663,1.10434270475807,0.857435594504678,1.15014565221884,0,4.40463523997555,2.29837208553338,3.22573719838111,0.791317726381163,0.823388792421687,0,4.18774498502071,1.68828783009504,1.83357897332172,0.883885756421003,0.996601765593721,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0,0,0,5.27005434620785,3.56059401582874,0.766371165625774,0,0,0,4.19413790333504,2.74500361691176,1.38219787324151,3.30266208365325,3.58001640262463,1.24672826735736,2.27137768294861,0.203678727700633,0.497627882440372,0.252722758433675,0,0,0,0,0,0.408218994907967,0,0.374806898238915,0.776110112217047,0,0,0,0.219195732427575,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,3.99550902271842,2.57261530948211,0,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0.228497025219458,0,0,0,0.280543279561274,0.126473074248515,0.442830443938806,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0.318909537314974,0,0,0,0,0,0,0.275936746304732,2.72936002979246,2.69586879162067,0,0,0,0,0.215423397732799,0,0.222798674082394,0.566153061577665,0,0.292255857911312,0,2.89189184779626,0.141940085208269,0,0.325773918707152,0.164970122972535,6.63725691699814,0,0.302323556964751,0,0,0,0.258428293168221,0,0,1.26414703174326,3.16255825724996,3.09406629744561,2.04263763452273,0,0,0,0,0.535106452806212,0,0,0,0.21183207086382,0.882113592219848,0.8244312647074,0.645857706783622,0.542816324353403,0.716234064018819,0.656563598980245,0,4.45020724825223,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0,0,0,0.134864346384821,0.495920734352016,0.523511883968059,0.259229946583586,4.34937519160848,0,0,0,0,0.129159823477731,0,0.234714477291508,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.428736758158132,0,2.25900737046827,2.30162618253588,1.71868654031819,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,3.15224842256954,0.906284817968409,1.03552062350364,0.103787347584177,0.399024873401031,0.341467211508268,0.486213434136588,0.419226325255965,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0,0.192075457214608,0.0574354689556133,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0,0.263069711437843,0.407412341537585,0,0.355905054372522,0.0985044823755635,0.818462086339379,0,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.956441660344217,0.661774257358546,0
|short_description=p9@Fry
|short_description=p9@Fry
}}
}}

Latest revision as of 19:00, 25 September 2015

Short description:p9@Fry
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Fry_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -181bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end
EntrezGene:Fry
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Fry

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.24e-1223
neuroblast (sensu Vertebrata)1.24e-1223
neuron5.86e-0833
neuronal stem cell5.86e-0833
neuroblast5.86e-0833
electrically signaling cell5.86e-0833
raphe nuclei neuron8.50e-083
neuron of the substantia nigra3.33e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.89e-3754
neural tube2.00e-3352
neural rod2.00e-3352
future spinal cord2.00e-3352
neural keel2.00e-3352
brain1.57e-3247
future brain1.57e-3247
central nervous system1.69e-3173
regional part of brain9.95e-3146
nervous system1.90e-3075
neurectoderm8.44e-2664
neural plate8.44e-2664
presumptive neural plate8.44e-2664
anterior neural tube3.94e-2540
gray matter7.07e-2534
brain grey matter1.29e-2429
regional part of telencephalon1.29e-2429
telencephalon1.29e-2429
ectoderm-derived structure3.81e-2495
ectoderm3.81e-2495
presumptive ectoderm3.81e-2495
regional part of forebrain2.57e-2339
forebrain2.57e-2339
future forebrain2.57e-2339
ecto-epithelium1.00e-2173
pre-chordal neural plate1.91e-1949
cerebral cortex3.44e-1921
cerebral hemisphere3.44e-1921
pallium3.44e-1921
structure with developmental contribution from neural crest9.52e-1692
regional part of cerebral cortex7.33e-1317
occipital lobe3.77e-1210
visual cortex3.77e-1210
neocortex3.77e-1210
tube2.52e-11114
anatomical conduit3.45e-11122
regional part of midbrain2.07e-094
midbrain2.07e-094
presumptive midbrain2.07e-094
midbrain neural tube2.07e-094
posterior neural tube1.68e-0812
chordal neural plate1.68e-0812
raphe nuclei8.50e-083
reticular formation8.50e-083
organ system subdivision1.17e-07194
substantia nigra3.33e-073
telencephalic nucleus3.33e-073
midbrain nucleus3.33e-073
neural nucleus3.33e-073
nucleus of brain3.33e-073
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