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FFCP PHASE1:Mm9::chr8:75095912..75095923,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=74166
|EntrezGene=74166
|HGNC=
|HGNC=
|MCL_coexpression_id=311
|TSSclassifier=NA
|UniProt=Q3TMP8
|UniProt=Q3TMP8
|association_with_transcript=-78bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end
|association_with_transcript=-78bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end
|cluster_id=chr8:75095912..75095923,+
|description=CAGE_peak_3_at_Tmem38a_5end
|description=CAGE_peak_3_at_Tmem38a_5end
|id=chr8:75095912..75095923,+
|id=chr8:75095912..75095923,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.90e-15!52;UBERON:0005068!1.90e-15!52;UBERON:0006241!1.90e-15!52;UBERON:0007135!1.90e-15!52;UBERON:0000955!2.68e-13!50;UBERON:0006238!2.68e-13!50;UBERON:0000073!4.75e-13!75;UBERON:0001016!4.75e-13!75;UBERON:0002616!6.73e-13!49;UBERON:0001017!1.05e-12!73;UBERON:0005743!1.05e-12!73;UBERON:0003080!3.72e-12!40;UBERON:0002780!4.68e-12!39;UBERON:0001890!4.68e-12!39;UBERON:0006240!4.68e-12!39;UBERON:0002346!4.89e-12!71;UBERON:0003075!4.89e-12!71;UBERON:0007284!4.89e-12!71;UBERON:0000033!5.98e-12!63;UBERON:0002020!1.18e-11!34;UBERON:0003056!4.82e-11!49;UBERON:0004121!1.52e-10!102;UBERON:0000924!1.52e-10!102;UBERON:0006601!1.52e-10!102;UBERON:0002791!2.64e-09!29;UBERON:0003528!2.64e-09!29;UBERON:0001893!2.64e-09!29;UBERON:0000025!1.65e-08!114;UBERON:0004111!6.12e-08!122;UBERON:0002021!8.52e-07!10;UBERON:0000411!8.52e-07!10;UBERON:0001950!8.52e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.06e-13,54;UBERON:0001049,7.31e-13,52;UBERON:0005068,7.31e-13,52;UBERON:0006241,7.31e-13,52;UBERON:0007135,7.31e-13,52;UBERON:0002020,7.81e-13,34;UBERON:0001017,1.59e-12,73;UBERON:0001016,6.47e-12,75;UBERON:0010314,1.26e-11,92;UBERON:0002780,1.85e-10,39;UBERON:0001890,1.85e-10,39;UBERON:0006240,1.85e-10,39;UBERON:0002021,2.56e-10,10;UBERON:0000411,2.56e-10,10;UBERON:0001950,2.56e-10,10;UBERON:0003080,4.90e-10,40;UBERON:0002346,9.20e-10,64;UBERON:0003075,9.20e-10,64;UBERON:0007284,9.20e-10,64;UBERON:0000955,2.66e-09,47;UBERON:0006238,2.66e-09,47;UBERON:0003528,5.11e-09,29;UBERON:0002791,5.11e-09,29;UBERON:0001893,5.11e-09,29;UBERON:0004121,7.11e-09,95;UBERON:0000924,7.11e-09,95;UBERON:0006601,7.11e-09,95;UBERON:0002616,9.47e-09,46;UBERON:0003056,6.39e-08,49;UBERON:0002619,1.29e-07,17;UBERON:0005418,1.37e-07,5;UBERON:0002472,1.37e-07,5;UBERON:0008784,1.37e-07,5;UBERON:0006058,1.37e-07,5;UBERON:0004709,1.37e-07,5;UBERON:0002529,1.37e-07,5;UBERON:0010538,1.37e-07,5;UBERON:0005420,1.37e-07,5;UBERON:0010758,1.37e-07,5;UBERON:0000978,1.37e-07,5;UBERON:0002103,1.37e-07,5;UBERON:0000376,1.37e-07,5;UBERON:0000154,1.37e-07,5;UBERON:0010709,1.37e-07,5;UBERON:0005730,1.37e-07,5;UBERON:0010371,1.50e-07,73;UBERON:0002240,7.41e-07,6;UBERON:0005174,7.41e-07,6;UBERON:0001137,7.41e-07,6;UBERON:0000956,8.23e-07,21;UBERON:0001869,8.23e-07,21;UBERON:0000203,8.23e-07,21
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0.437102012094987,0,0,0,0.157731082679119,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0.872100625521786,0.878744730937887,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0,1.03134418455488,0,1.05798195854407,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0,1.19840044207362,1.92109152660777,0.311068836925433,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,0.489963196859816,0.670918297127655,0,0,3.83062014255563,2.61131106535614,0.791317726381163,1.00636407962651,0.52091337055676,2.23346399201105,3.37657566019008,2.75036845998258,1.17851434189467,1.42371680799103,1.86399445825301,0.681535739998656,0.604572480854284,0.289864488701678,0,0,0,0,0,4.0728881838208,0,1.03914401841148,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,1.48439043634778,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,4.04417124868523,3.75430581382669,2.90925151881133,0,0.878342391034642,1.25668024088073,0,0,0,0,0.599162557619291,0.915001205637253,1.50785222535437,2.43354048269187,3.06858548796397,1.0389402227978,0.811206315338788,0.407357455401265,0.746441823660558,0,1.89397670297827,0.130120442962704,0,0.720248519221397,0.30140963567143,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0,1.39300866608867,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0.473489471170421,0.983821158737019,0.925602677324269,0.465067889500816,2.14618721119695,1.63471479314037,1.97471819896177,3.2833492815819,2.67527071501324,4.5321996101853,1.53685080703735,4.2946054003319,3.15434922846191,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.771494018793504,0.505892296994058,0.442830443938806,0,0.740382983530803,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0.630540576424764,0.8858587585951,0.318909537314974,0.983179888294428,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0.642202359951168,0.586058432961016,0,13.3809591418318,0,0,0.430846795465598,0,0,0,0.809621403349789,0,0,1.28528526568723,0.425820255624806,0.35613120733451,0.162886959353576,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,4.08527526904546,0.36012218806262,0.388076051348264,1.92903331528433,1.59606210278046,0.713475270408282,0.658196082408484,2.74018454203139,0.23467170806371,0.21183207086382,0,0.65954501176592,0.161464426695906,0.180938774784468,0.358117032009409,0.492422699235184,0,2.03967832211561,0,0,0.370389054739423,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0.627264888043406,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.192423683280659,0.233753804363138,5.66825959038028,0.443971906748129,0,0.167884616364078,0.19318959403219,0.187682475451182,0,0,1.00314420807073,0.564751842617067,5.06357760157895,2.29158205375759,4.1244763762485,2.05524755931193,1.5107877947794,7.42524750254986,4.05289082901798,3.62513927187364,2.5888015587591,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,1.12369808963859,1.08842759088278,0.976402972245426,1.42888107384922,1.27472758539341,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.238436189947321,1.0174249164263,1.03520318456864,0.761531471025089,1.09756783723664,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.929621047115796,0.192906610981141,0.249810577937946,1.87145286756327,1.07435527024149,2.29545998482612,3.08827986767322,2.55054619182464
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0,0,0.234064526321993,0,0,0,0.437102012094987,0,0,0,0.157731082679119,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,0.125896817975577,0,0.183546752161682,0,0.872100625521786,0.878744730937887,1.1665793944457,0.55994568650145,1.43752564364972,0,0,0,0.257259436035947,0,1.03134418455488,0,1.05798195854407,0.633831403506179,1.35537812827653,2.66788438833342,0.449949858640699,0,0,1.19840044207362,1.92109152660777,0.311068836925433,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,0.489963196859816,0.670918297127655,0,0,3.83062014255563,2.61131106535614,0.791317726381163,1.00636407962651,0.52091337055676,2.23346399201105,3.37657566019008,2.75036845998258,1.17851434189467,1.42371680799103,1.86399445825301,0.681535739998656,0.604572480854284,0.289864488701678,0,0,0,0,0,4.0728881838208,0,1.03914401841148,0.70667914902068,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,1.48439043634778,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0.251333182659351,0,0.144599356919912,2.65383165584962,4.04417124868523,3.75430581382669,2.90925151881133,0,0.878342391034642,1.25668024088073,0,0,0,0,0.599162557619291,0.915001205637253,1.50785222535437,2.43354048269187,3.06858548796397,1.0389402227978,0.811206315338788,0.407357455401265,0.746441823660558,0,1.89397670297827,0.130120442962704,0,0.720248519221397,0.30140963567143,0.408218994907967,0.384341160854549,0.0937017245597288,0.517406741478031,0,0,0.351902248327898,0.43839146485515,0,1.39300866608867,0,0.199034266818493,0,0,0,0.414251545071004,0.469052119962192,0.900310307305074,0.473489471170421,0.983821158737019,0.925602677324269,0.465067889500816,2.14618721119695,1.63471479314037,1.97471819896177,3.2833492815819,2.67527071501324,4.5321996101853,1.53685080703735,4.2946054003319,3.15434922846191,0.411618449517138,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.771494018793504,0.505892296994058,0.442830443938806,0,0.740382983530803,0,0,0,0,0,0.241177159752417,0,0,0,0,1.43768206527355,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0.469380496577004,0,0.238043640886014,0.195133647857799,0.630540576424764,0.8858587585951,0.318909537314974,0.983179888294428,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0.642202359951168,0.586058432961016,0,13.3809591418318,0,0,0.430846795465598,0,0,0,0.809621403349789,0,0,1.28528526568723,0.425820255624806,0.35613120733451,0.162886959353576,0.494910368917606,0,0.728341908464944,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,4.08527526904546,0.36012218806262,0.388076051348264,1.92903331528433,1.59606210278046,0.713475270408282,0.658196082408484,2.74018454203139,0.23467170806371,0.21183207086382,0,0.65954501176592,0.161464426695906,0.180938774784468,0.358117032009409,0.492422699235184,0,2.03967832211561,0,0,0.370389054739423,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0.203319467126849,0,0.627264888043406,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.234714477291508,0.2604087696879,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.302478555410522,0.0974578807397524,0.192423683280659,0.233753804363138,5.66825959038028,0.443971906748129,0,0.167884616364078,0.19318959403219,0.187682475451182,0,0,1.00314420807073,0.564751842617067,5.06357760157895,2.29158205375759,4.1244763762485,2.05524755931193,1.5107877947794,7.42524750254986,4.05289082901798,3.62513927187364,2.5888015587591,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.618105171716683,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,1.12369808963859,1.08842759088278,0.976402972245426,1.42888107384922,1.27472758539341,0.77163688185482,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.238436189947321,1.0174249164263,1.03520318456864,0.761531471025089,1.09756783723664,0.789209134313529,0.543216455383447,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.929621047115796,0.192906610981141,0.249810577937946,1.87145286756327,1.07435527024149,2.29545998482612,3.08827986767322,2.55054619182464
|short_description=p3@Tmem38a
|short_description=p3@Tmem38a
}}
}}

Latest revision as of 19:03, 25 September 2015

Short description:p3@Tmem38a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tmem38a_5end
Coexpression cluster:MCL_coexpression_mm9:311
Association with transcript: -78bp_to_ENSMUST00000034244, NM_144534, uc009mgi.2_5end
EntrezGene:Tmem38a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tmem38a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.23
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.06e-1354
neural tube7.31e-1352
neural rod7.31e-1352
future spinal cord7.31e-1352
neural keel7.31e-1352
gray matter7.81e-1334
central nervous system1.59e-1273
nervous system6.47e-1275
structure with developmental contribution from neural crest1.26e-1192
regional part of forebrain1.85e-1039
forebrain1.85e-1039
future forebrain1.85e-1039
occipital lobe2.56e-1010
visual cortex2.56e-1010
neocortex2.56e-1010
anterior neural tube4.90e-1040
neurectoderm9.20e-1064
neural plate9.20e-1064
presumptive neural plate9.20e-1064
brain2.66e-0947
future brain2.66e-0947
brain grey matter5.11e-0929
regional part of telencephalon5.11e-0929
telencephalon5.11e-0929
ectoderm-derived structure7.11e-0995
ectoderm7.11e-0995
presumptive ectoderm7.11e-0995
regional part of brain9.47e-0946
pre-chordal neural plate6.39e-0849
regional part of cerebral cortex1.29e-0717
hindlimb bud1.37e-075
stylopod1.37e-075
lower limb segment1.37e-075
multi-limb segment region1.37e-075
pelvic appendage1.37e-075
limb segment1.37e-075
paired limb/fin segment1.37e-075
pelvic appendage bud1.37e-075
subdivision of organism along appendicular axis1.37e-075
leg1.37e-075
hindlimb1.37e-075
hindlimb stylopod1.37e-075
posterior region of body1.37e-075
pelvic complex1.37e-075
hindlimb/pelvic fin field1.37e-075
ecto-epithelium1.50e-0773
spinal cord7.41e-076
dorsal region element7.41e-076
dorsum7.41e-076
cerebral cortex8.23e-0721
cerebral hemisphere8.23e-0721
pallium8.23e-0721
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