FFCP PHASE1:Mm9::chr3:87650647..87650694,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:87650647..87650694,+
|short_description=p2@Sh2d2a
|description=CAGE_peak_2_at_Sh2d2a_5end
|association_with_transcript=0bp_to_ENSMUST00000029709,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=27371 | |EntrezGene=27371 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=Q9QXK9,Q5D0E4 | |UniProt=Q9QXK9,Q5D0E4 | ||
|association_with_transcript=0bp_to_ENSMUST00000029709,ENSMUST00000107581,NM_001025571,NM_021309,uc008psz.1,uc008pta.1_5end | |||
|cluster_id=chr3:87650647..87650694,+ | |||
|description=CAGE_peak_2_at_Sh2d2a_5end | |||
|id=chr3:87650647..87650694,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.03e-14!12;CL:0000084!2.19e-13!11;CL:0000827!2.19e-13!11;CL:0000542!7.87e-13!13;CL:0000051!7.87e-13!13;CL:0000791!1.74e-11!9;CL:0000789!1.74e-11!9;CL:0002420!1.74e-11!9;CL:0002419!1.74e-11!9;CL:0000790!1.74e-11!9;CL:0002031!7.61e-11!25;CL:0000624!2.69e-10!8;CL:0000738!7.03e-09!17;CL:0002087!7.03e-09!17;CL:0000893!7.39e-08!6;CL:0002489!7.39e-08!6;CL:0000898!7.39e-08!6;CL:0000809!7.39e-08!6;CL:0000810!7.39e-08!6;CL:0000895!7.39e-08!6;CL:0000808!7.39e-08!6;CL:0000894!7.39e-08!6;CL:0000806!7.39e-08!6;CL:0000807!7.39e-08!6;CL:0000805!7.39e-08!6;CL:0002425!7.39e-08!6;CL:0002436!7.39e-08!6;CL:0002427!7.39e-08!6;CL:0002428!7.39e-08!6;CL:0002429!7.39e-08!6;CL:0002433!7.39e-08!6;CL:0002431!7.39e-08!6;CL:0002432!7.39e-08!6;CL:0000988!2.72e-07!32;CL:0002032!2.72e-07!32;CL:0000037!2.72e-07!32;CL:0000566!2.72e-07!32;CL:0000837!2.72e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.64e-28,12;CL:0000084,2.33e-26,11;CL:0000827,2.33e-26,11;CL:0000542,8.55e-26,13;CL:0000051,8.55e-26,13;CL:0000791,2.32e-22,9;CL:0000789,2.32e-22,9;CL:0002420,2.32e-22,9;CL:0002419,2.32e-22,9;CL:0000790,2.32e-22,9;CL:0000624,7.27e-20,8;CL:0002031,2.80e-19,25;CL:0000738,4.23e-19,17;CL:0002087,4.23e-19,17;CL:0000893,9.29e-15,6;CL:0002489,9.29e-15,6;CL:0000898,9.29e-15,6;CL:0000809,9.29e-15,6;CL:0000810,9.29e-15,6;CL:0000895,9.29e-15,6;CL:0000808,9.29e-15,6;CL:0000894,9.29e-15,6;CL:0000806,9.29e-15,6;CL:0000807,9.29e-15,6;CL:0000805,9.29e-15,6;CL:0002425,9.29e-15,6;CL:0002436,9.29e-15,6;CL:0002427,9.29e-15,6;CL:0002428,9.29e-15,6;CL:0002429,9.29e-15,6;CL:0002433,9.29e-15,6;CL:0002431,9.29e-15,6;CL:0002432,9.29e-15,6;CL:0000988,2.62e-14,32;CL:0002032,2.62e-14,32;CL:0000037,2.62e-14,32;CL:0000837,2.62e-14,32;CL:0002320,6.24e-09,46;CL:0000134,6.24e-09,46;CL:0000219,3.95e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.19e-24!29;UBERON:0002193!8.80e-22!48;UBERON:0003408!3.06e-20!24;UBERON:0002370!2.10e-19!23;UBERON:0000974!2.10e-19!23;UBERON:0004807!2.10e-19!23;UBERON:0005058!2.10e-19!23;UBERON:0003351!2.10e-19!23;UBERON:0009113!2.10e-19!23;UBERON:0003295!2.10e-19!23;UBERON:0009722!2.10e-19!23;UBERON:0005562!2.10e-19!23;UBERON:0007690!2.10e-19!23;UBERON:0002390!4.99e-19!45;UBERON:0003061!4.99e-19!45;UBERON:0006562!2.80e-18!24;UBERON:0001557!2.80e-18!24;UBERON:0001042!2.80e-18!24;UBERON:0008814!2.80e-18!24;UBERON:0009145!2.80e-18!24;UBERON:0000072!2.02e-15!27;UBERON:0001004!2.06e-13!42;UBERON:0002405!4.03e-13!70;UBERON:0000065!1.06e-12!41;UBERON:0005057!1.14e-11!51;UBERON:0000063!1.39e-11!35;UBERON:0004119!3.36e-10!130;UBERON:0000925!3.36e-10!130;UBERON:0006595!3.36e-10!130;UBERON:0001007!5.78e-10!128;UBERON:0001555!5.78e-10!128;UBERON:0007026!5.78e-10!128;UBERON:0004921!6.02e-09!126;UBERON:0004185!6.02e-09!126;UBERON:0000077!1.98e-08!97;UBERON:0003081!7.75e-08!88;UBERON:0001041!1.06e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.48e-41,23;UBERON:0000974,8.48e-41,23;UBERON:0004807,8.48e-41,23;UBERON:0005058,8.48e-41,23;UBERON:0003351,8.48e-41,23;UBERON:0009113,8.48e-41,23;UBERON:0003295,8.48e-41,23;UBERON:0009722,8.48e-41,23;UBERON:0005562,8.48e-41,23;UBERON:0007690,8.48e-41,23;UBERON:0006562,6.76e-39,24;UBERON:0003408,6.76e-39,24;UBERON:0001557,6.76e-39,24;UBERON:0001042,6.76e-39,24;UBERON:0008814,6.76e-39,24;UBERON:0009145,6.76e-39,24;UBERON:0004177,5.07e-38,29;UBERON:0005057,5.07e-38,29;UBERON:0000072,4.88e-34,27;UBERON:0002193,8.62e-33,48;UBERON:0002405,8.62e-33,48;UBERON:0000077,1.32e-30,35;UBERON:0002390,6.78e-30,45;UBERON:0003061,6.78e-30,45;UBERON:0007811,2.54e-24,36;UBERON:0000065,9.06e-21,41;UBERON:0001004,3.68e-20,42;UBERON:0000153,1.40e-19,43;UBERON:0003929,2.87e-14,55;UBERON:0002368,1.10e-12,60;UBERON:0003081,1.11e-12,87;UBERON:0002530,2.38e-11,65;UBERON:0000490,4.16e-11,66;UBERON:0001041,1.75e-10,80;UBERON:0005911,2.02e-10,69;UBERON:0000949,8.54e-10,72;UBERON:0002384,6.24e-09,46;UBERON:0000926,1.87e-08,120;UBERON:0004120,1.87e-08,120;UBERON:0006603,1.87e-08,120;UBERON:0001007,5.53e-08,116;UBERON:0001555,5.53e-08,116;UBERON:0007026,5.53e-08,116;UBERON:0004119,9.38e-08,118;UBERON:0000925,9.38e-08,118;UBERON:0006595,9.38e-08,118;UBERON:0004921,2.14e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,25.0499247476658,2.956563165185,4.44722600011788,1.71217968225505,1.7549874978974,24.995306569956,28.2367899813362,0.666219523631325,0.404950534779652,0,4.57420139769445,3.15363197293199,1.69755860719212,0.595303031057488,1.39007331681239,3.39559725880616,1.27993938234725,0.68822784320151,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,19.5847778343063,10.7550015725588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,0.445326417194474,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.690739927463582,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.36696704638282,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,2.28778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,14.5365115488962,1.41907650703115,4.82741498674688,7.40548690973432,10.025494957379,9.93406773906325,10.4570041082373,10.485956429395,9.79374564497032,7.84930108546498,9.88096614341037,10.5254511198933,10.1022433722346,10.6357980985228,0,0,0,0,0.19318959403219,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,25.0499247476658,2.956563165185,4.44722600011788,1.71217968225505,1.7549874978974,24.995306569956,28.2367899813362,0.666219523631325,0.404950534779652,0,4.57420139769445,3.15363197293199,1.69755860719212,0.595303031057488,1.39007331681239,3.39559725880616,1.27993938234725,0.68822784320151,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,19.5847778343063,10.7550015725588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.34255163915718,10.3575153458869,0.445326417194474,0,0,0.230615497256059,0,0,0,0,0.144599356919912,0,0,0.441683036920787,0,1.86391761218122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0.482443521363367,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.690739927463582,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,1.36696704638282,0.206386867963223,0.185194527369712,0.376736914009382,0.820165366326151,2.28778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,14.5365115488962,1.41907650703115,4.82741498674688,7.40548690973432,10.025494957379,9.93406773906325,10.4570041082373,10.485956429395,9.79374564497032,7.84930108546498,9.88096614341037,10.5254511198933,10.1022433722346,10.6357980985228,0,0,0,0,0.19318959403219,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Sh2d2a | |||
}} | }} |
Latest revision as of 19:10, 25 September 2015
Short description: | p2@Sh2d2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sh2d2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000029709, ENSMUST00000107581, NM_001025571, NM_021309, uc008psz.1, uc008pta.1_5end |
EntrezGene: | Sh2d2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data