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FFCP PHASE1:Mm9::chr7:130521519..130521600,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:130521519..130521600,+
|DHSsupport=NA
|short_description=p1@Lcmt1
|DPIdataset=NA
|description=CAGE_peak_1_at_Lcmt1_5end
|association_with_transcript=23bp_to_ENSMUST00000033025,NM_025304,uc009jpp.1,uc012ftj.1_5end
|EntrezGene=30949
|EntrezGene=30949
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A2RTH5
|UniProt=A2RTH5
|association_with_transcript=23bp_to_ENSMUST00000033025,NM_025304,uc009jpp.1,uc012ftj.1_5end
|cluster_id=chr7:130521519..130521600,+
|description=CAGE_peak_1_at_Lcmt1_5end
|id=chr7:130521519..130521600,+
|ontology_enrichment_celltype=CL:0000117!1.80e-12!23;CL:0000337!1.80e-12!23;CL:0000540!5.17e-09!33;CL:0000047!5.17e-09!33;CL:0000031!5.17e-09!33;CL:0000404!5.17e-09!33;CL:0000393!6.89e-09!39;CL:0000211!6.89e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.80e-12,23;CL:0000337,1.80e-12,23;CL:0000540,5.17e-09,33;CL:0000047,5.17e-09,33;CL:0000031,5.17e-09,33;CL:0000404,5.17e-09,33;CL:0000393,6.89e-09,39;CL:0000211,6.89e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!4.40e-23!52;UBERON:0005068!4.40e-23!52;UBERON:0006241!4.40e-23!52;UBERON:0007135!4.40e-23!52;UBERON:0000955!3.03e-22!50;UBERON:0006238!3.03e-22!50;UBERON:0002616!9.82e-22!49;UBERON:0001017!1.01e-21!73;UBERON:0005743!1.01e-21!73;UBERON:0000033!1.18e-20!63;UBERON:0000073!7.07e-20!75;UBERON:0001016!7.07e-20!75;UBERON:0002346!7.37e-20!71;UBERON:0003075!7.37e-20!71;UBERON:0007284!7.37e-20!71;UBERON:0002020!2.93e-18!34;UBERON:0003080!1.03e-17!40;UBERON:0003056!1.80e-17!49;UBERON:0002780!4.40e-17!39;UBERON:0001890!4.40e-17!39;UBERON:0006240!4.40e-17!39;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0004121!1.14e-12!102;UBERON:0000924!1.14e-12!102;UBERON:0006601!1.14e-12!102;UBERON:0000956!1.95e-11!21;UBERON:0001869!1.95e-11!21;UBERON:0000203!1.95e-11!21;UBERON:0007811!2.85e-10!86;UBERON:0002619!1.30e-09!17;UBERON:0000153!2.59e-09!94;UBERON:0002021!4.34e-08!10;UBERON:0000411!4.34e-08!10;UBERON:0001950!4.34e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.64e-24,54;UBERON:0002346,3.73e-23,64;UBERON:0003075,3.73e-23,64;UBERON:0007284,3.73e-23,64;UBERON:0001049,4.40e-23,52;UBERON:0005068,4.40e-23,52;UBERON:0006241,4.40e-23,52;UBERON:0007135,4.40e-23,52;UBERON:0001017,1.01e-21,73;UBERON:0000955,2.53e-20,47;UBERON:0006238,2.53e-20,47;UBERON:0001016,7.07e-20,75;UBERON:0002616,8.03e-20,46;UBERON:0002020,2.93e-18,34;UBERON:0003080,1.03e-17,40;UBERON:0010371,1.49e-17,73;UBERON:0003056,1.80e-17,49;UBERON:0002780,4.40e-17,39;UBERON:0001890,4.40e-17,39;UBERON:0006240,4.40e-17,39;UBERON:0010314,1.02e-15,92;UBERON:0003528,1.08e-15,29;UBERON:0002791,1.08e-15,29;UBERON:0001893,1.08e-15,29;UBERON:0004121,2.32e-14,95;UBERON:0000924,2.32e-14,95;UBERON:0006601,2.32e-14,95;UBERON:0000956,1.95e-11,21;UBERON:0001869,1.95e-11,21;UBERON:0000203,1.95e-11,21;UBERON:0002619,1.30e-09,17;UBERON:0002021,4.34e-08,10;UBERON:0000411,4.34e-08,10;UBERON:0001950,4.34e-08,10
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4.3609899444374,32.5096075873622,31.5723326981848,29.9156712332263,28.1866483944275,27.6889076679875,25.1285704304668,25.7933796850668,24.853572523477,38.3311198305249,40.3694674318743,39.7100377097034,44.1404197540988,51.1472900971815,50.1799692707611,35.4418860710177,38.1498847592774,58.9309515672495,47.8336559235492,34.275570744686,36.9733011134969,40.9504934886132,48.3768608246336,42.6140299367168,37.4165793945036,33.3784676032525,32.9335531684715,36.0362446305968,35.0353581320072,31.0923771152399,33.5751196505679,36.3517895159276,33.3855090491943,35.9980858719232,30.8353321716687,39.5134997005835,33.8221239417723,36.2630771346409,37.6719708362771,54.615600356294,54.7623356559123,29.7972046919902,82.2578250617996,136.66994591333,126.129114802966,140.932296306092,141.607022251199,119.889440959862,125.39538696669,114.753825039407,129.242185325351,116.004456699956,114.425028897152,49.0914154073156,31.5229649986815,44.2200038903207,34.5211538236978,42.3418588508524,34.7464230970527,41.1156446432988,44.0915022491234,34.659274635916,37.1464901292782,49.9354220783772,34.5186204736519,35.5837728385553,33.4851547077466,32.680781835744,30.0065025508336,30.7093463753867,30.6725660537291,42.0327618819373,41.9516922383032,41.4871795386353,37.9798225180982,30.2813961233098,47.0922389888744,37.8319709269629,36.9765836486626,34.0246029543357,43.6695720986819,38.4325642183789,38.718816744384,31.7941848572787,30.0438671245469,27.8277109355389,33.1564840137967,34.9160965875866,42.9674194053267,33.218288399248,32.8752712693896,29.8409798027396,37.9417240885567,37.3307215348879
|phase1_expression=42.5995933298752,47.8096308465925,32.3049459966571,57.4682001482977,50.0895729946347,25.6855286025191,28.0335168714631,40.9320935309797,12.248618827195,12.4054198950657,13.5262194898149,11.9658238493005,23.6257007305064,23.8657698603863,28.647439516147,31.1811911780332,34.2785320282792,14.1957974411207,15.219702130237,19.0975343309114,42.7767749459881,35.7447424323187,44.403964153619,45.4378480733275,38.3113499382174,38.4735415957064,37.0455316696804,32.1052136701975,45.7956440889861,53.9344477686252,25.49900872536,37.4668097341182,53.5106365198576,79.2408405077194,62.6808014860266,70.8159589227177,55.5340649033644,31.3898723052681,28.1280724028568,38.7407570540611,29.4115744015507,32.7861832780054,36.8987868303677,45.1969576532322,39.7397570380497,81.6783047119483,38.3371758730539,43.3870061197089,33.8316721411087,44.5244468880109,38.7762387902254,37.3756667348926,11.2414346058683,17.4086914082723,20.5017217476903,32.9292078126012,40.4012150313647,35.5813743671435,63.1227357881945,92.5734213726058,80.4965882452848,35.5786758672589,37.3503814366679,29.6966906702862,43.5101199529469,40.4973665519277,28.4620104992484,27.6637179831519,54.3333568496423,68.4480107341672,70.6691870140644,82.838785477103,85.0343882663712,67.0024671705799,56.5488279007595,89.164222301172,153.06107458915,81.2091470221794,83.7155606246527,71.3504816620349,73.8305283871446,79.1788323246275,81.2422527094019,104.111082855861,76.5519221361819,80.7282324197849,66.9146899755784,66.9174010512829,20.976155553292,27.2813331985496,46.9580471696718,24.9522924324602,6.79971333707751,27.5248627735287,22.7421746106684,21.5052905806721,36.3751048141237,30.6774580640504,35.8504686351959,37.4539948980961,48.1684495636247,17.9657068380045,10.1922095882658,14.2213340630666,38.3189142589849,30.6565437224869,32.3535644809461,25.5771890570694,15.2773351351831,29.8368699520298,36.6054039476547,44.4519598335726,31.363707626824,41.2980035114186,27.868523591162,29.4059823711441,29.9105910958592,25.3048874609845,20.3460426948471,28.6327324406914,22.9675179198809,26.183263669302,46.5979403045305,84.6136503363371,74.7724743324035,42.4058711646262,33.3086046126458,37.1939693215913,38.5022788031386,93.3195683492045,96.9901277975488,83.9371072113934,116.636118849018,97.6833047001863,91.0111635170873,89.5571772134022,32.5885964321012,42.4227769780417,119.032419222261,39.5630689066571,46.3228776947225,43.4514977379264,39.0734821677608,49.5818850679503,36.6036365434144,40.099594449158,37.1995846502123,45.7904966208058,39.8800786925758,40.2795950757455,38.7092473160687,33.5369470614189,39.2046621408093,36.9147296513497,33.7482703709027,42.5933330991575,49.8571362992397,50.1828418873695,35.5204374244491,35.0042555584998,37.0551174770132,38.3532190911962,33.3810077175146,35.2207974827853,35.7899701898718,35.1126256573116,32.9976283721532,29.0745702494252,30.2790123840804,44.3252153013557,38.6698221533732,39.9125965671157,42.5927223664638,34.8936688776967,104.724394384935,70.6954687045684,77.6484140011925,59.2369269326339,42.870938357582,45.9828610283668,29.3817811814373,28.840744021138,34.0238407082652,31.3872283085723,48.8764933390847,46.6098041868951,38.202951737641,40.7860767684359,39.3827455980623,38.6492345721315,45.6051285235605,53.7681437786791,55.3830270782998,42.7289437160386,45.0830942692322,48.8763186828754,47.7123118432359,31.490983130753,38.827233794294,39.707129806513,45.5296310739987,42.3252272251776,20.7516838961004,38.2075292089855,33.2184701741313,42.2740771283525,38.1377028210385,32.8000937263287,31.3189797691146,29.0573098825319,14.5921704097532,23.0631587077988,12.9391385874619,19.3513292787622,21.2185617717901,17.4279425783507,25.2950353065896,18.332853811808,29.0062508561569,33.7294712951463,32.7559602648472,39.0413697282933,37.5504397261603,28.141051250225,33.3261097240419,16.3912264200551,33.2610154064063,31.2265212404773,23.5993057613081,33.4281162020105,28.147652044141,31.9674419465141,15.0791283939272,30.4587182938477,24.5882136509518,30.3530420935206,88.4633750832734,81.8137572413578,22.2951525712279,44.687354115174,37.8609863299508,45.6813330827067,45.6697603193534,31.0659437338318,25.6218475194753,34.8184132870264,38.457016659115,34.1939353756235,33.994748903401,71.3333322456412,37.8980027506077,46.1189913498191,34.8578093016653,42.3973216039416,50.4431525691859,50.9839335925461,48.0694455573954,46.7740597794627,45.1811896107582,36.8922177532713,30.4945385938501,34.535704300363,32.7977588113944,30.97160227771,44.2758156014995,52.5991270565753,55.4916557378674,46.455762260078,48.8975824698812,40.2953625859394,39.3695318685847,36.0305011556183,42.124549274143,46.5831372145337,42.4755791595316,40.2480934641258,49.1778327662565,26.8764592294612,28.2562746717835,24.8489250704002,29.6043413127778,26.4266848589549,44.0136063311075,76.024373824309,27.5102118084543,32.4027382702259,37.224100001312,33.1528484328256,37.5909126232819,24.4792645330979,20.9073468892442,32.4687369390887,23.493995546752,30.5494597764836,35.113295287506,34.3609899444374,32.5096075873622,31.5723326981848,29.9156712332263,28.1866483944275,27.6889076679875,25.1285704304668,25.7933796850668,24.853572523477,38.3311198305249,40.3694674318743,39.7100377097034,44.1404197540988,51.1472900971815,50.1799692707611,35.4418860710177,38.1498847592774,58.9309515672495,47.8336559235492,34.275570744686,36.9733011134969,40.9504934886132,48.3768608246336,42.6140299367168,37.4165793945036,33.3784676032525,32.9335531684715,36.0362446305968,35.0353581320072,31.0923771152399,33.5751196505679,36.3517895159276,33.3855090491943,35.9980858719232,30.8353321716687,39.5134997005835,33.8221239417723,36.2630771346409,37.6719708362771,54.615600356294,54.7623356559123,29.7972046919902,82.2578250617996,136.66994591333,126.129114802966,140.932296306092,141.607022251199,119.889440959862,125.39538696669,114.753825039407,129.242185325351,116.004456699956,114.425028897152,49.0914154073156,31.5229649986815,44.2200038903207,34.5211538236978,42.3418588508524,34.7464230970527,41.1156446432988,44.0915022491234,34.659274635916,37.1464901292782,49.9354220783772,34.5186204736519,35.5837728385553,33.4851547077466,32.680781835744,30.0065025508336,30.7093463753867,30.6725660537291,42.0327618819373,41.9516922383032,41.4871795386353,37.9798225180982,30.2813961233098,47.0922389888744,37.8319709269629,36.9765836486626,34.0246029543357,43.6695720986819,38.4325642183789,38.718816744384,31.7941848572787,30.0438671245469,27.8277109355389,33.1564840137967,34.9160965875866,42.9674194053267,33.218288399248,32.8752712693896,29.8409798027396,37.9417240885567,37.3307215348879
|short_description=p1@Lcmt1
}}
}}

Latest revision as of 20:16, 25 September 2015

Short description:p1@Lcmt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lcmt1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 23bp_to_ENSMUST00000033025, NM_025304, uc009jpp.1, uc012ftj.1_5end
EntrezGene:Lcmt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lcmt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G742.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I547.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I632.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I357.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I450.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E940.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E823.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A128.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A331.18
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A534.28
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.22
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.10
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A342.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H235.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I944.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D145.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.31
GP2+ M cell, pool1.CNhs13228.11845-124H938.47
GP2+ M cell, pool2.CNhs13231.11846-124I137.05
GP2+ M cell, pool3.CNhs13240.11847-124I232.11
Ileum epithelium, pool1.CNhs13199.10252-104B945.80
Ileum epithelium, pool2.CNhs13232.10253-104C153.93
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I337.47
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G653.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E979.24
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F562.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F670.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F755.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G831.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H338.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G929.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H436.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D845.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B381.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B738.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C243.39
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B833.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C344.52
Mouse Astrocytes, donor2.CNhs12078.11552-120C438.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C437.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.24
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I917.41
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A120.50
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.93
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E140.40
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C535.58
Mouse Granule cells, donor1.CNhs12131.11713-123C363.12
Mouse Granule cells, donor2.CNhs12357.11731-123E392.57
Mouse Granule cells, donor3.CNhs12108.11636-122C780.50
Mouse Meningeal cells, donor1.CNhs12132.11716-123C635.58
Mouse Meningeal cells, donor3.CNhs12109.11639-122D137.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E743.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D240.50
Mouse Microglia, donor1.CNhs12629.11718-123C828.46
Mouse Microglia, donor2.CNhs12634.11736-123E827.66
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D554.33
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F568.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D970.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F182.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D585.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D267.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F256.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D689.16
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3153.06
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F381.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D783.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D471.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F473.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D879.18
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5104.11
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I676.55
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D680.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F666.91
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E166.92
Mouse Schwann, donor1.CNhs12507.11728-123D920.98
Mouse Schwann, donor2.CNhs12573.11746-123F927.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G346.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F422.74
Mouse hepatocyte, donor8.CNhs13091.11824-124F621.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A736.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E335.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I837.45
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G648.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G138.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G332.35
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B625.58
accessory axillary lymph node, adult.CNhs10475.1063-29H915.28
adrenal gland, adult.CNhs10508.49-24D729.84
adrenal gland, embryo E14.CNhs11038.406-44C536.61
adrenal gland, embryo E16.CNhs11004.1254-43D644.45
adrenal gland, embryo E17.CNhs11043.1263-45I131.36
adrenal gland, embryo E18.CNhs11026.1262-18F541.30
adrenal gland, neonate N00.CNhs11191.1311-23C127.87
adrenal gland, neonate N25.CNhs11223.1377-27I329.41
amnion, adult pregnant day17.5.CNhs10488.583-22A829.91
aorta, adult.CNhs10498.46-23H125.30
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F528.63
bone (os femoris), neonate N16.CNhs11225.1525-43A622.97
bone (os femoris), neonate N20.CNhs11195.1350-25C326.18
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B284.61
cerebellum, neonate N30.CNhs11135.1395-42I274.77
colon, adult.CNhs10468.36-18H742.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C733.31
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D137.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D438.50
corpora quadrigemina, adult.CNhs10501.16-22A493.32
corpus striatum, adult.CNhs10487.19-21D896.99
corpus striatum, neonate N00.CNhs11226.630-43F183.94
cortex, adult.CNhs10473.12-14D5116.64
cortex, neonate N30.CNhs11107.1392-42F297.68
diencephalon, adult.CNhs10482.20-12F291.01
diencephalon, neonate N30.CNhs11201.1388-42B289.56
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A242.42
epididymis, adult.CNhs10490.58-23B2119.03
eyeball, adult.CNhs10484.31-12G439.56
eyeball, embryo E12.CNhs11016.345-16C646.32
eyeball, embryo E14.CNhs10521.399-16E243.45
eyeball, embryo E15.CNhs10593.426-16C939.07
eyeball, embryo E17.CNhs11023.1261-18D449.58
eyeball, neonate N00.CNhs11207.633-15C636.60
eyeball, neonate N01.CNhs11140.1532-43E740.10
eyeball, neonate N02.CNhs11205.1551-44G837.20
eyeball, neonate N16.CNhs11188.777-19A245.79
forelimb, embryo E11.CNhs10596.335-25E239.88
forelimb, embryo E12.CNhs10600.359-14H240.28
forelimb, embryo E13.CNhs10589.384-1E238.71
forelimb, embryo E14.CNhs10577.413-26A833.54
forelimb, embryo E15.CNhs11007.437-20E739.20
forelimb, embryo E17.CNhs10598.1517-43C436.91
forelimb, embryo E18.CNhs11008.1520-43B533.75
gonad, embryo E13.CNhs11044.1564-45I642.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C849.86
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D250.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D535.52
heart, embryo E11.CNhs10586.331-24E935.00
heart, embryo E12.CNhs11015.353-12F537.06
heart, embryo E13.CNhs11013.376-3I938.35
heart, embryo E14.CNhs10597.403-26D433.38
heart, embryo E15.CNhs11017.431-16C835.22
heart, embryo E16.CNhs11021.457-17C635.79
heart, embryo E17.CNhs11025.479-18E535.11
heart, embryo E18.CNhs11030.1283-20G333.00
heart, neonate N00.CNhs11213.639-21E329.07
heart, neonate N03.CNhs11221.1349-25I230.28
heart, neonate N10.CNhs11118.749-24G144.33
heart, neonate N16.CNhs11209.782-15G138.67
heart, neonate N20.CNhs11127.821-26I639.91
heart, neonate N25.CNhs11196.1351-25D342.59
heart, neonate N30.CNhs11202.1390-42D234.89
hippocampus, adult.CNhs10478.13-16E8104.72
hippocampus, neonate N00.CNhs11228.627-43G170.70
intestinal mucosa, adult.CNhs10506.860-29I377.65
intestine, adult.CNhs10496.178-9A359.24
intestine, embryo E12.CNhs11019.1251-16I542.87
intestine, embryo E13.CNhs11010.381-16D545.98
intestine, embryo E15.CNhs10602.976-16D829.38
intestine, embryo E16.CNhs10585.463-22H428.84
intestine, embryo E17.CNhs10582.482-18D334.02
intestine, embryo E18.CNhs10526.1289-20F731.39
intestine, neonate N00.CNhs11126.644-26D148.88
intestine, neonate N01.CNhs11192.1322-23E946.61
intestine, neonate N06.CNhs11102.688-20B838.20
intestine, neonate N07.CNhs11095.720-20F240.79
intestine, neonate N10.CNhs11098.755-23A539.38
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E345.61
intestine, neonate N30.CNhs11131.1384-42G153.77
kidney, embryo E14.CNhs10606.411-4I955.38
kidney, embryo E15.CNhs10997.434-16F842.73
kidney, embryo E16.CNhs10584.464-22A545.08
kidney, embryo E17.CNhs11028.483-18I248.88
kidney, embryo E18.CNhs11001.1288-20C747.71
kidney, neonate N00.CNhs11214.646-21G731.49
kidney, neonate N10.CNhs11206.758-6D538.83
kidney, neonate N20.CNhs11113.832-19I139.71
kidney, neonate N25.CNhs11122.1353-25F345.53
kidney, neonate N30.CNhs11203.1385-42H142.33
liver, adult pregnant day01.CNhs10466.508-5B220.75
liver, embryo E12.CNhs10601.355-15F838.21
liver, embryo E13.CNhs10524.378-3H633.22
liver, embryo E14.CNhs10594.409-16E142.27
liver, embryo E15.CNhs10520.433-16D738.14
liver, embryo E16.CNhs10523.462-17F532.80
liver, embryo E17.CNhs10510.481-18A331.32
liver, embryo E18.CNhs10579.499-43G429.06
liver, neonate N00.CNhs11117.641-24F414.59
liver, neonate N03.CNhs11123.1345-25G223.06
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H219.35
liver, neonate N10.CNhs11115.751-24B921.22
liver, neonate N20.CNhs11220.823-25A317.43
liver, neonate N25.CNhs11198.1368-26H125.30
liver, neonate N30.CNhs11106.1382-42D118.33
lung, adult.CNhs10474.28-22B129.01
lung, embryo E12.CNhs10522.354-16G233.73
lung, embryo E14.CNhs10604.404-26F832.76
lung, embryo E15.CNhs11020.432-17C539.04
lung, embryo E16.CNhs10998.458-17B637.55
lung, embryo E17.CNhs10605.480-44A628.14
lung, embryo E18.CNhs10583.1287-20I633.33
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E533.26
lung, neonate N07.CNhs11111.715-19A331.23
lung, neonate N10.CNhs11219.750-23E623.60
lung, neonate N20.CNhs11109.822-18A433.43
lung, neonate N25.CNhs11119.1359-25C728.15
lung, neonate N30.CNhs11133.1394-42H231.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A130.46
mammary gland, adult lactating day02.CNhs10480.595-22B624.59
mammary gland, adult pregnant day19.CNhs10476.588-5H230.35
medulla oblongata, adult.CNhs10477.17-12C288.46
medulla oblongata, neonate N30.CNhs11200.1396-42A381.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C722.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E137.86
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E245.68
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D825.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.99
olfactory brain, adult.CNhs10489.18-22I971.33
ovary, adult.CNhs10507.91-2I737.90
ovary, embryo E18.CNhs11040.505-44H746.12
ovary, neonate N00.CNhs11217.1299-22I434.86
oviduct, adult pregnant day01.CNhs10500.988-6G642.40
pancreas, adult.CNhs10486.34-16E450.44
pancreas, embryo E14.CNhs11012.405-44F450.98
pancreas, embryo E15.CNhs11042.1556-45F248.07
pancreas, embryo E16.CNhs11003.460-26E546.77
pancreas, embryo E17.CNhs10599.1558-45G345.18
pancreas, embryo E18.CNhs10580.1535-43I736.89
pancreas, neonate N00.CNhs11105.645-26G930.49
pancreas, neonate N01.CNhs11138.1531-43D734.54
pancreas, neonate N02.CNhs11139.1539-43D832.80
pancreas, neonate N16.CNhs11136.787-43B630.97
pancreas, neonate N25.CNhs11094.1555-45E244.28
pancreas, neonate N30.CNhs11182.1548-44H552.60
pituitary gland, adult.CNhs10493.21-1G855.49
pituitary gland, embryo E12.CNhs11018.346-16E646.46
pituitary gland, embryo E13.CNhs11009.370-44C748.90
pituitary gland, embryo E14.CNhs11037.398-44A540.30
pituitary gland, embryo E15.CNhs10592.427-16B939.37
pituitary gland, embryo E16.CNhs11036.449-43F636.03
pituitary gland, embryo E17.CNhs11039.1265-44F542.12
pituitary gland, neonate N00.CNhs11190.1308-22E946.58
placenta, adult pregnant day10.CNhs10472.539-13I742.48
placenta, adult pregnant day17.CNhs10464.577-18G340.25
prostate, adult.CNhs10470.859-1F849.18
skin, adult.CNhs10492.30-1C326.88
skin, neonate N00.CNhs11124.650-25G428.26
skin, neonate N03.CNhs11215.662-22H324.85
skin, neonate N06.CNhs11097.693-20I529.60
skin, neonate N10.CNhs11108.762-6C426.43
small intestine, neonate N16.CNhs11114.790-21I144.01
spinal cord, adult.CNhs10505.24-13C976.02
spleen, adult.CNhs10465.25-2G227.51
spleen, embryo E16.CNhs11035.461-43C132.40
spleen, embryo E18.CNhs11011.1271-21F237.22
spleen, neonate N10.CNhs11116.752-24D133.15
spleen, neonate N20.CNhs11112.824-19H137.59
spleen, neonate N25.CNhs11099.1354-25G324.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.49
stomach, adult.CNhs10503.33-1H630.55
stomach, embryo E12.CNhs10588.356-43E335.11
stomach, embryo E15.CNhs10603.1252-16G834.36
stomach, embryo E16.CNhs11022.459-17D432.51
stomach, embryo E17.CNhs11006.1035-18D531.57
stomach, embryo E18.CNhs10999.1286-20C629.92
stomach, neonate N03.CNhs11193.1340-24B828.19
stomach, neonate N07.CNhs11210.718-18A927.69
stomach, neonate N25.CNhs11104.1355-25E425.13
stomach, neonate N30.CNhs11134.1386-42I125.79
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G538.33
testis, embryo E13.CNhs11031.389-23F540.37
testis, embryo E15.CNhs11034.443-27C539.71
testis, embryo E16.CNhs11033.470-26G544.14
testis, embryo E17.CNhs11029.486-18I551.15
testis, embryo E18.CNhs11027.503-18G550.18
testis, neonate N00.CNhs11189.1300-22B735.44
testis, neonate N07.CNhs11222.726-26I438.15
testis, neonate N10.CNhs11204.763-44D958.93
testis, neonate N20.CNhs11110.839-18H347.83
testis, neonate N30.CNhs11130.1391-42E234.28
thymus, adult.CNhs10471.38-12B536.97
thymus, embryo E14.CNhs11041.402-44I440.95
thymus, embryo E15.CNhs11005.430-45I248.38
thymus, embryo E16.CNhs11002.456-26C542.61
thymus, embryo E17.CNhs10581.478-18C137.42
thymus, embryo E18.CNhs10595.1273-19G433.38
thymus, neonate N02.CNhs11181.1541-43F832.93
thymus, neonate N03.CNhs11137.2104-43C736.04
thymus, neonate N06.CNhs11197.681-26C435.04
thymus, neonate N07.CNhs11211.713-19D331.09
thymus, neonate N10.CNhs11194.748-24E433.58
thymus, neonate N20.CNhs11186.820-7A236.35
thymus, neonate N25.CNhs11125.1362-25G733.39
thymus, neonate N30.CNhs11132.1393-42G236.00
tongue, adult.CNhs10499.32-1B430.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H339.51
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G536.26
urinary bladder, adult.CNhs10481.879-12E437.67
uterus, adult pregnant day19.CNhs10497.590-15F554.62
uterus, adult.CNhs10509.92-27E554.76
vagina, adult.CNhs10502.89-27D529.80
vesicular gland, adult.CNhs10491.51-27F882.26
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1136.67
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2126.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3140.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7141.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.89
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5125.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6114.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7129.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8116.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9114.43
whole body, embryo E11.CNhs11014.324-5I849.09
whole body, embryo E12.CNhs10587.857-27C931.52
whole body, embryo E13.CNhs10512.372-23H244.22
whole body, embryo E14.5.CNhs10578.420-27D234.52
whole body, embryo E14.CNhs10519.395-14B142.34
whole body, embryo E16.CNhs10514.453-14F234.75
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G541.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G549.94
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.58
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G541.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.28
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G547.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G537.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G534.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.43
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G538.72
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F934.92
whole body, embryo E17.CNhs10517.475-3I542.97
whole body, embryo E18.CNhs10516.493-3B333.22
whole body, neonate N00.CNhs10525.657-19C232.88
whole body, neonate N01.CNhs10576.659-23C629.84
whole body, neonate N06.CNhs10515.692-21D137.94
whole body, neonate N10.CNhs10518.761-6B437.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.80e-1223
neuroblast (sensu Vertebrata)1.80e-1223
neuron5.17e-0933
neuronal stem cell5.17e-0933
neuroblast5.17e-0933
electrically signaling cell5.17e-0933
electrically responsive cell6.89e-0939
electrically active cell6.89e-0939

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.64e-2454
neurectoderm3.73e-2364
neural plate3.73e-2364
presumptive neural plate3.73e-2364
neural tube4.40e-2352
neural rod4.40e-2352
future spinal cord4.40e-2352
neural keel4.40e-2352
central nervous system1.01e-2173
brain2.53e-2047
future brain2.53e-2047
nervous system7.07e-2075
regional part of brain8.03e-2046
gray matter2.93e-1834
anterior neural tube1.03e-1740
ecto-epithelium1.49e-1773
pre-chordal neural plate1.80e-1749
regional part of forebrain4.40e-1739
forebrain4.40e-1739
future forebrain4.40e-1739
structure with developmental contribution from neural crest1.02e-1592
brain grey matter1.08e-1529
regional part of telencephalon1.08e-1529
telencephalon1.08e-1529
ectoderm-derived structure2.32e-1495
ectoderm2.32e-1495
presumptive ectoderm2.32e-1495
cerebral cortex1.95e-1121
cerebral hemisphere1.95e-1121
pallium1.95e-1121
regional part of cerebral cortex1.30e-0917
occipital lobe4.34e-0810
visual cortex4.34e-0810
neocortex4.34e-0810
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