Personal tools

FFCP PHASE1:Mm9::chr10:19928241..19928252,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=621697
|EntrezGene=621697
|HGNC=
|HGNC=
|MCL_coexpression_id=81
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_NM_001101561,uc011xbb.1_5end
|association_with_transcript=0bp_to_NM_001101561,uc011xbb.1_5end
|cluster_id=chr10:19928241..19928252,+
|description=CAGE_peak_3_at_Gm6251_5end
|description=CAGE_peak_3_at_Gm6251_5end
|id=chr10:19928241..19928252,+
|id=chr10:19928241..19928252,+
|ontology_enrichment_celltype=CL:0002031!8.01e-19!25;CL:0002320!9.56e-17!46;CL:0000134!9.56e-17!46;CL:0000988!4.50e-16!32;CL:0002032!4.50e-16!32;CL:0000037!4.50e-16!32;CL:0000566!4.50e-16!32;CL:0000837!4.50e-16!32;CL:0000063!3.69e-15!66;CL:0000219!3.95e-15!54;CL:0000738!1.73e-12!17;CL:0002087!1.73e-12!17;CL:0000838!2.46e-11!12;CL:0000548!1.18e-10!115;CL:0000004!1.18e-10!115;CL:0000255!1.18e-10!115;CL:0000084!2.15e-10!11;CL:0000827!2.15e-10!11;CL:0000542!4.64e-10!13;CL:0000051!4.64e-10!13;CL:0002371!7.14e-10!118;CL:0000144!3.86e-09!121;CL:0000012!3.86e-09!121;CL:0000791!3.93e-09!9;CL:0000789!3.93e-09!9;CL:0002420!3.93e-09!9;CL:0002419!3.93e-09!9;CL:0000790!3.93e-09!9;CL:0000839!7.67e-09!13;CL:0000624!3.20e-08!8;CL:0000034!1.19e-07!97;CL:0000763!1.31e-07!16;CL:0000049!1.35e-07!19;CL:0000414!2.57e-07!11;CL:0000723!4.26e-07!91;CL:0000048!4.26e-07!91
|ontology_enrichment_celltype=CL:0002031!8.01e-19!25;CL:0002320!9.56e-17!46;CL:0000134!9.56e-17!46;CL:0000988!4.50e-16!32;CL:0002032!4.50e-16!32;CL:0000037!4.50e-16!32;CL:0000566!4.50e-16!32;CL:0000837!4.50e-16!32;CL:0000063!3.69e-15!66;CL:0000219!3.95e-15!54;CL:0000738!1.73e-12!17;CL:0002087!1.73e-12!17;CL:0000838!2.46e-11!12;CL:0000548!1.18e-10!115;CL:0000004!1.18e-10!115;CL:0000255!1.18e-10!115;CL:0000084!2.15e-10!11;CL:0000827!2.15e-10!11;CL:0000542!4.64e-10!13;CL:0000051!4.64e-10!13;CL:0002371!7.14e-10!118;CL:0000144!3.86e-09!121;CL:0000012!3.86e-09!121;CL:0000791!3.93e-09!9;CL:0000789!3.93e-09!9;CL:0002420!3.93e-09!9;CL:0002419!3.93e-09!9;CL:0000790!3.93e-09!9;CL:0000839!7.67e-09!13;CL:0000624!3.20e-08!8;CL:0000034!1.19e-07!97;CL:0000763!1.31e-07!16;CL:0000049!1.35e-07!19;CL:0000414!2.57e-07!11;CL:0000723!4.26e-07!91;CL:0000048!4.26e-07!91
|ontology_enrichment_celltype_v019_2=CL:0002031,1.78e-33,25;CL:0000988,5.21e-25,32;CL:0002032,5.21e-25,32;CL:0000037,5.21e-25,32;CL:0000837,5.21e-25,32;CL:0000838,1.04e-22,12;CL:0002320,8.64e-22,46;CL:0000134,8.64e-22,46;CL:0000738,2.17e-21,17;CL:0002087,2.17e-21,17;CL:0000219,3.45e-21,54;CL:0000542,9.25e-21,13;CL:0000051,9.25e-21,13;CL:0000084,2.10e-20,11;CL:0000827,2.10e-20,11;CL:0000791,2.54e-20,9;CL:0000789,2.54e-20,9;CL:0002420,2.54e-20,9;CL:0002419,2.54e-20,9;CL:0000790,2.54e-20,9;CL:0000624,4.56e-18,8;CL:0000893,2.68e-14,6;CL:0002489,2.68e-14,6;CL:0000898,2.68e-14,6;CL:0000809,2.68e-14,6;CL:0000810,2.68e-14,6;CL:0000895,2.68e-14,6;CL:0000808,2.68e-14,6;CL:0000894,2.68e-14,6;CL:0000806,2.68e-14,6;CL:0000807,2.68e-14,6;CL:0000805,2.68e-14,6;CL:0002425,2.68e-14,6;CL:0002436,2.68e-14,6;CL:0002427,2.68e-14,6;CL:0002428,2.68e-14,6;CL:0002429,2.68e-14,6;CL:0002433,2.68e-14,6;CL:0002431,2.68e-14,6;CL:0002432,2.68e-14,6;CL:0000839,1.26e-12,13;CL:0000050,1.57e-11,9;CL:0000034,4.95e-10,97;CL:0000763,6.33e-10,16;CL:0000553,9.00e-10,6;CL:0000556,9.00e-10,6;CL:0000723,3.46e-08,91;CL:0000048,3.46e-08,91;CL:0000049,4.41e-08,19;CL:0002076,1.50e-07,15;CL:0000068,1.74e-07,3;CL:0002202,1.74e-07,3;CL:0000069,1.74e-07,3;CL:0002632,1.74e-07,3;CL:0002368,1.74e-07,3;CL:0000307,1.74e-07,3;CL:0000377,1.74e-07,3;CL:0000223,9.55e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!9.56e-17!46;UBERON:0002193!1.53e-08!48;UBERON:0002390!4.36e-07!45;UBERON:0003061!4.36e-07!45;UBERON:0002405!5.76e-07!70
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.64e-22,46;UBERON:0002193,6.44e-10,48;UBERON:0002405,6.44e-10,48;UBERON:0002390,3.73e-08,45;UBERON:0003061,3.73e-08,45;UBERON:0000072,4.55e-08,27;UBERON:0003126,1.74e-07,3;UBERON:0001005,1.74e-07,3;UBERON:0007196,1.74e-07,3;UBERON:0001558,1.74e-07,3
|phase1_expression=0,0,0,1.81478526784098,1.50268718983904,0,2.33612640595526,4.00282302668886,6.75785866328,8.19225842126977,7.87602653837323,4.78632953972018,4.28001824828014,4.45844052336887,0.999329285446988,3.44207954562704,6.99561878128147,6.30924330716475,4.52477630898938,4.66828616977833,0,0.297872853602656,9.66439219814061,4.63978026100879,2.98232065387321,0,0,0,2.85035129184561,0,0,3.17515336729816,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0.139986421625363,0,8.89247812106003,3.62681071005672,7.73015738027667,0.257259436035947,0.573066879877513,0,0,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,1.8931548333296,2.79614772395106,2.31891590961342,0.860423876981386,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0,6.49465011507172,6.36011234118612,0,1.28326477414318,2.54805239706646,0,4.32982082022428,5.32055717497707,3.53867111510348,0,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,1.76922110389975,0,0,0,1.86391761218122,0,0,0.255457055208591,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,4.52373851817817,3.80733978673097,0,0,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0,0.350630706544707,0,2.21985953374065,2.9605572681127,2.68615386182526,0.19318959403219,0,0,0,0.501572104035363,0,0,0,1.20297227640581,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0.220591419119515,0
|phase1_expression=0,0,0,1.81478526784098,1.50268718983904,0,2.33612640595526,4.00282302668886,6.75785866328,8.19225842126977,7.87602653837323,4.78632953972018,4.28001824828014,4.45844052336887,0.999329285446988,3.44207954562704,6.99561878128147,6.30924330716475,4.52477630898938,4.66828616977833,0,0.297872853602656,9.66439219814061,4.63978026100879,2.98232065387321,0,0,0,2.85035129184561,0,0,3.17515336729816,1.84519436275371,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.550640256485045,0,0,0,0,0.139986421625363,0,8.89247812106003,3.62681071005672,7.73015738027667,0.257259436035947,0.573066879877513,0,0,0.528990979272033,0,0,0.889294796111139,0,0,0,0.299600110518405,0.384218305321555,0,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,1.8931548333296,2.79614772395106,2.31891590961342,0.860423876981386,0.679971333707751,0.539703191637817,0,0.448026887097336,0,0,6.49465011507172,6.36011234118612,0,1.28326477414318,2.54805239706646,0,4.32982082022428,5.32055717497707,3.53867111510348,0,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,1.76922110389975,0,0,0,1.86391761218122,0,0,0.255457055208591,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.260240885925407,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0.464473343720877,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0.379335801906163,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0.144649058581512,4.52373851817817,3.80733978673097,0,0,0,0,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0.188368457004691,0.410082683163076,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0,0,0,0.350630706544707,0,2.21985953374065,2.9605572681127,2.68615386182526,0.19318959403219,0,0,0,0.501572104035363,0,0,0,1.20297227640581,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0.220591419119515,0
|short_description=p3@Gm6251
|short_description=p3@Gm6251
}}
}}

Latest revision as of 21:02, 25 September 2015

Short description:p3@Gm6251
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gm6251_5end
Coexpression cluster:MCL_coexpression_mm9:81
Association with transcript: 0bp_to_NM_001101561, uc011xbb.1_5end
EntrezGene:Gm6251
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Gm6251

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.19
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.79
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hematopoietic lineage restricted progenitor cell1.78e-3325
hematopoietic cell5.21e-2532
hematopoietic oligopotent progenitor cell5.21e-2532
hematopoietic stem cell5.21e-2532
hematopoietic multipotent progenitor cell5.21e-2532
lymphoid lineage restricted progenitor cell1.04e-2212
connective tissue cell8.64e-2246
mesenchymal cell8.64e-2246
leukocyte2.17e-2117
nongranular leukocyte2.17e-2117
motile cell3.45e-2154
lymphocyte9.25e-2113
common lymphoid progenitor9.25e-2113
T cell2.10e-2011
pro-T cell2.10e-2011
mature alpha-beta T cell2.54e-209
alpha-beta T cell2.54e-209
immature T cell2.54e-209
mature T cell2.54e-209
immature alpha-beta T cell2.54e-209
CD4-positive, alpha-beta T cell4.56e-188
thymocyte2.68e-146
double negative thymocyte2.68e-146
naive T cell2.68e-146
double-positive, alpha-beta thymocyte2.68e-146
CD4-positive, alpha-beta thymocyte2.68e-146
naive thymus-derived CD4-positive, alpha-beta T cell2.68e-146
DN4 thymocyte2.68e-146
DN1 thymic pro-T cell2.68e-146
DN2 thymocyte2.68e-146
DN3 thymocyte2.68e-146
immature single positive thymocyte2.68e-146
early T lineage precursor2.68e-146
mature CD4 single-positive thymocyte2.68e-146
resting double-positive thymocyte2.68e-146
double-positive blast2.68e-146
CD69-positive double-positive thymocyte2.68e-146
CD69-positive, CD4-positive single-positive thymocyte2.68e-146
CD4-positive, CD8-intermediate double-positive thymocyte2.68e-146
CD24-positive, CD4 single-positive thymocyte2.68e-146
myeloid lineage restricted progenitor cell1.26e-1213
megakaryocyte-erythroid progenitor cell1.57e-119
stem cell4.95e-1097
myeloid cell6.33e-1016
megakaryocyte progenitor cell9.00e-106
megakaryocyte9.00e-106
somatic stem cell3.46e-0891
multi fate stem cell3.46e-0891
common myeloid progenitor4.41e-0819
endo-epithelial cell1.50e-0715
duct epithelial cell1.74e-073
epithelial cell of tracheobronchial tree1.74e-073
branched duct epithelial cell1.74e-073
epithelial cell of lower respiratory tract1.74e-073
respiratory epithelial cell1.74e-073
tracheal epithelial cell1.74e-073
tracheoblast1.74e-073
endodermal cell9.55e-0720

Uber anatomy
Ontology termp-valuen
connective tissue8.64e-2246
hemolymphoid system6.44e-1048
immune system6.44e-1048
hematopoietic system3.73e-0845
blood island3.73e-0845
segment of respiratory tract4.55e-0827
trachea1.74e-073
respiratory airway1.74e-073
tracheobronchial tree1.74e-073
lower respiratory tract1.74e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:19928241..19928252,%2B&oldid=4213921"