FFCP PHASE1:Mm9::chr3:90070429..90070488,+: Difference between revisions
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{{FFCP|EntrezGene=229541|HGNC=|MCL_coexpression_id=316|UniProt=Q3U1Y4,E9Q303|association_with_transcript=0bp_to_ENSMUST00000090888,ENSMUST00000098914,ENSMUST00000170925,ENSMUST00000171074,NM_201407,uc008qbx.2_5end|description=CAGE_peak_1_at_Dennd4b_5end|id=chr3:90070429..90070488,+|ontology_enrichment_celltype=CL:0000988!1.99e-13!32;CL:0002032!1.99e-13!32;CL:0000037!1.99e-13!32;CL:0000566!1.99e-13!32;CL:0000837!1.99e-13!32;CL:0002031!2.28e-11!25;CL:0000738!1.91e-09!17;CL:0002087!1.91e-09!17;CL:0002320!2.47e-09!46;CL:0000134!2.47e-09!46;CL:0000838!5.06e-08!12;CL:0000049!1.73e-07!19;CL:0000084!2.00e-07!11;CL:0000827!2.00e-07!11;CL:0000542!3.19e-07!13;CL:0000051!3.19e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,3.49e-14,32;CL:0002032,3.49e-14,32;CL:0000037,3.49e-14,32;CL:0000837,3.49e-14,32;CL:0002031,4.80e-12,25;CL:0002320,3.82e-10,46;CL:0000134,3.82e-10,46;CL:0000738,8.97e-10,17;CL:0002087,8.97e-10,17;CL:0000838,2.72e-08,12;CL:0000049,5.61e-08,19;CL:0000084,1.13e-07,11;CL:0000827,1.13e-07,11;CL:0000542,1.85e-07,13;CL:0000051,1.85e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.39e-21!70;UBERON:0002193!1.35e-19!48;UBERON:0002390!3.22e-18!45;UBERON:0003061!3.22e-18!45;UBERON:0003081!1.06e-13!88;UBERON:0000926!8.44e-12!193;UBERON:0004120!8.44e-12!193;UBERON:0006603!8.44e-12!193;UBERON:0005057!1.27e-11!51;UBERON:0002371!9.94e-10!16;UBERON:0004177!1.22e-09!29;UBERON:0002384!2.47e-09!46;UBERON:0001041!4.18e-09!92;UBERON:0001474!8.51e-09!22;UBERON:0004765!8.51e-09!22;UBERON:0001434!8.51e-09!22;UBERON:0000077!1.02e-08!97;UBERON:0003408!3.14e-07!24;UBERON:0002204!3.76e-07!32;UBERON:0002370!5.26e-07!23;UBERON:0000974!5.26e-07!23;UBERON:0004807!5.26e-07!23;UBERON:0005058!5.26e-07!23;UBERON:0003351!5.26e-07!23;UBERON:0009113!5.26e-07!23;UBERON:0003295!5.26e-07!23;UBERON:0009722!5.26e-07!23;UBERON:0005562!5.26e-07!23;UBERON:0007690!5.26e-07!23;UBERON:0003104!5.27e-07!131;UBERON:0009142!5.27e-07!131;UBERON:0006562!9.36e-07!24;UBERON:0001557!9.36e-07!24;UBERON:0001042!9.36e-07!24;UBERON:0008814!9.36e-07!24;UBERON:0009145!9.36e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.69e-21,48;UBERON:0002405,3.69e-21,48;UBERON:0002390,1.02e-19,45;UBERON:0003061,1.02e-19,45;UBERON:0003081,6.02e-14,87;UBERON:0004177,1.14e-10,29;UBERON:0005057,1.14e-10,29;UBERON:0000926,3.06e-10,120;UBERON:0004120,3.06e-10,120;UBERON:0006603,3.06e-10,120;UBERON:0002384,3.82e-10,46;UBERON:0002371,4.54e-10,16;UBERON:0001041,5.93e-10,80;UBERON:0000077,1.88e-09,35;UBERON:0001474,3.35e-09,22;UBERON:0004765,3.35e-09,22;UBERON:0001434,3.35e-09,22;UBERON:0003408,4.16e-08,24;UBERON:0002370,7.10e-08,23;UBERON:0000974,7.10e-08,23;UBERON:0004807,7.10e-08,23;UBERON:0005058,7.10e-08,23;UBERON:0003351,7.10e-08,23;UBERON:0009113,7.10e-08,23;UBERON:0003295,7.10e-08,23;UBERON:0009722,7.10e-08,23;UBERON:0005562,7.10e-08,23;UBERON:0007690,7.10e-08,23;UBERON:0002204,9.36e-08,32;UBERON:0006562,1.38e-07,24;UBERON:0001557,1.38e-07,24;UBERON:0001042,1.38e-07,24;UBERON:0008814,1.38e-07,24;UBERON:0009145,1.38e-07,24;UBERON:0001004,2.71e-07,42;UBERON:0000065,4.64e-07,41;UBERON:0002530,6.18e-07,65;UBERON:0005911,6.33e-07,69|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0,0.233612640595526,47.6465063499416,23.3709278771767,28.5558722112832,17.8066686954525,21.9373437237175,41.9441788331454,46.6824948917446,16.9885978525988,18.2227740650843,3.49780939064073,71.9253737016782,71.9850776430129,58.5657719481282,2.55129870453209,21.9433002153956,20.112383763698,8.15961356246374,9.1763712426868,0,0,0.430942465371778,0.190023419456374,0.252030129759931,0.886922042621219,1.90509202037889,4.30545351309199,0,0.288851619751275,0.166234645358492,0.204169356262369,69.0577190715898,35.160090503571,46.593613213668,61.7643062432565,90.8450494994733,52.9206284803957,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,41.9456515144341,31.9159342484992,36.970317905671,2.05807548828758,3.43840127926508,0.515672092277442,0,0,0.633831403506179,0,0.889294796111139,76.0415261102782,95.9200371689965,84.5471336785859,21.8708080678435,18.4424786554346,0.207379224616955,0.135005938331691,0,0.856952953211411,1.98781686856452,0.122490799214954,0,0.919218786610021,0,2.042997409363,0.307213066512487,0.131886287730194,0,0.52091337055676,0.837548997004143,0.56276261003168,0.30559649555362,0.883885756421003,1.28134512719193,1.1183966749518,0.757261933331841,0.151143120213571,6.95674772884027,6.88339101585109,0.679971333707751,0,1.29955283489534,1.34408066129201,7.02222100658759,0.170430322578058,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,3.31133251185274,55.4127071004947,5.04703272820404,2.60227990149204,3.34912026143355,1.38369298353635,1.20578112442098,1.41106448562846,1.63366568728578,0.988779870937496,6.65157041831594,22.9998743506967,4.85300549842228,12.5879665522424,8.24287930329878,0,0.585561594023094,1.25668024088073,4.59822699375465,19.0506047964413,14.3976655438418,19.0605340609597,0.7489531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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229541 | |||
|HGNC= | |||
|MCL_coexpression_id=316 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U1Y4,E9Q303 | |||
|association_with_transcript=0bp_to_ENSMUST00000090888,ENSMUST00000098914,ENSMUST00000170925,ENSMUST00000171074,NM_201407,uc008qbx.2_5end | |||
|cluster_id=chr3:90070429..90070488,+ | |||
|description=CAGE_peak_1_at_Dennd4b_5end | |||
|id=chr3:90070429..90070488,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.99e-13!32;CL:0002032!1.99e-13!32;CL:0000037!1.99e-13!32;CL:0000566!1.99e-13!32;CL:0000837!1.99e-13!32;CL:0002031!2.28e-11!25;CL:0000738!1.91e-09!17;CL:0002087!1.91e-09!17;CL:0002320!2.47e-09!46;CL:0000134!2.47e-09!46;CL:0000838!5.06e-08!12;CL:0000049!1.73e-07!19;CL:0000084!2.00e-07!11;CL:0000827!2.00e-07!11;CL:0000542!3.19e-07!13;CL:0000051!3.19e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.49e-14,32;CL:0002032,3.49e-14,32;CL:0000037,3.49e-14,32;CL:0000837,3.49e-14,32;CL:0002031,4.80e-12,25;CL:0002320,3.82e-10,46;CL:0000134,3.82e-10,46;CL:0000738,8.97e-10,17;CL:0002087,8.97e-10,17;CL:0000838,2.72e-08,12;CL:0000049,5.61e-08,19;CL:0000084,1.13e-07,11;CL:0000827,1.13e-07,11;CL:0000542,1.85e-07,13;CL:0000051,1.85e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.39e-21!70;UBERON:0002193!1.35e-19!48;UBERON:0002390!3.22e-18!45;UBERON:0003061!3.22e-18!45;UBERON:0003081!1.06e-13!88;UBERON:0000926!8.44e-12!193;UBERON:0004120!8.44e-12!193;UBERON:0006603!8.44e-12!193;UBERON:0005057!1.27e-11!51;UBERON:0002371!9.94e-10!16;UBERON:0004177!1.22e-09!29;UBERON:0002384!2.47e-09!46;UBERON:0001041!4.18e-09!92;UBERON:0001474!8.51e-09!22;UBERON:0004765!8.51e-09!22;UBERON:0001434!8.51e-09!22;UBERON:0000077!1.02e-08!97;UBERON:0003408!3.14e-07!24;UBERON:0002204!3.76e-07!32;UBERON:0002370!5.26e-07!23;UBERON:0000974!5.26e-07!23;UBERON:0004807!5.26e-07!23;UBERON:0005058!5.26e-07!23;UBERON:0003351!5.26e-07!23;UBERON:0009113!5.26e-07!23;UBERON:0003295!5.26e-07!23;UBERON:0009722!5.26e-07!23;UBERON:0005562!5.26e-07!23;UBERON:0007690!5.26e-07!23;UBERON:0003104!5.27e-07!131;UBERON:0009142!5.27e-07!131;UBERON:0006562!9.36e-07!24;UBERON:0001557!9.36e-07!24;UBERON:0001042!9.36e-07!24;UBERON:0008814!9.36e-07!24;UBERON:0009145!9.36e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.69e-21,48;UBERON:0002405,3.69e-21,48;UBERON:0002390,1.02e-19,45;UBERON:0003061,1.02e-19,45;UBERON:0003081,6.02e-14,87;UBERON:0004177,1.14e-10,29;UBERON:0005057,1.14e-10,29;UBERON:0000926,3.06e-10,120;UBERON:0004120,3.06e-10,120;UBERON:0006603,3.06e-10,120;UBERON:0002384,3.82e-10,46;UBERON:0002371,4.54e-10,16;UBERON:0001041,5.93e-10,80;UBERON:0000077,1.88e-09,35;UBERON:0001474,3.35e-09,22;UBERON:0004765,3.35e-09,22;UBERON:0001434,3.35e-09,22;UBERON:0003408,4.16e-08,24;UBERON:0002370,7.10e-08,23;UBERON:0000974,7.10e-08,23;UBERON:0004807,7.10e-08,23;UBERON:0005058,7.10e-08,23;UBERON:0003351,7.10e-08,23;UBERON:0009113,7.10e-08,23;UBERON:0003295,7.10e-08,23;UBERON:0009722,7.10e-08,23;UBERON:0005562,7.10e-08,23;UBERON:0007690,7.10e-08,23;UBERON:0002204,9.36e-08,32;UBERON:0006562,1.38e-07,24;UBERON:0001557,1.38e-07,24;UBERON:0001042,1.38e-07,24;UBERON:0008814,1.38e-07,24;UBERON:0009145,1.38e-07,24;UBERON:0001004,2.71e-07,42;UBERON:0000065,4.64e-07,41;UBERON:0002530,6.18e-07,65;UBERON:0005911,6.33e-07,69 | |||
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| |||
|short_description=p1@Dennd4b | |||
}} |
Latest revision as of 21:12, 25 September 2015
Short description: | p1@Dennd4b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dennd4b_5end |
Coexpression cluster: | MCL_coexpression_mm9:316 |
Association with transcript: | 0bp_to_ENSMUST00000090888, ENSMUST00000098914, ENSMUST00000170925, ENSMUST00000171074, NM_201407, uc008qbx.2_5end |
EntrezGene: | Dennd4b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.49e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.49e-14 | 32 |
hematopoietic stem cell | 3.49e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.49e-14 | 32 |
hematopoietic lineage restricted progenitor cell | 4.80e-12 | 25 |
connective tissue cell | 3.82e-10 | 46 |
mesenchymal cell | 3.82e-10 | 46 |
leukocyte | 8.97e-10 | 17 |
nongranular leukocyte | 8.97e-10 | 17 |
lymphoid lineage restricted progenitor cell | 2.72e-08 | 12 |
common myeloid progenitor | 5.61e-08 | 19 |
T cell | 1.13e-07 | 11 |
pro-T cell | 1.13e-07 | 11 |
lymphocyte | 1.85e-07 | 13 |
common lymphoid progenitor | 1.85e-07 | 13 |