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FFCP PHASE1:Mm9::chr7:134164591..134164649,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=69017
|EntrezGene=69017
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000161728_5end
|association_with_transcript=0bp_to_ENSMUST00000161728_5end
|cluster_id=chr7:134164591..134164649,-
|description=CAGE_peak_1_at_Prrt2_5end
|description=CAGE_peak_1_at_Prrt2_5end
|id=chr7:134164591..134164649,-
|id=chr7:134164591..134164649,-
|ontology_enrichment_celltype=CL:0000117!7.27e-10!23;CL:0000337!7.27e-10!23
|ontology_enrichment_celltype=CL:0000117!7.27e-10!23;CL:0000337!7.27e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,6.55e-10,23;CL:0000337,6.55e-10,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon=UBERON:0001049!1.01e-21!52;UBERON:0005068!1.01e-21!52;UBERON:0006241!1.01e-21!52;UBERON:0007135!1.01e-21!52;UBERON:0001017!6.32e-21!73;UBERON:0005743!6.32e-21!73;UBERON:0000955!2.48e-20!50;UBERON:0006238!2.48e-20!50;UBERON:0000073!9.23e-20!75;UBERON:0001016!9.23e-20!75;UBERON:0002616!9.67e-20!49;UBERON:0002346!9.79e-20!71;UBERON:0003075!9.79e-20!71;UBERON:0007284!9.79e-20!71;UBERON:0000033!1.06e-19!63;UBERON:0004121!1.65e-18!102;UBERON:0000924!1.65e-18!102;UBERON:0006601!1.65e-18!102;UBERON:0002020!4.85e-16!34;UBERON:0003056!1.07e-15!49;UBERON:0003080!5.56e-15!40;UBERON:0002780!2.28e-14!39;UBERON:0001890!2.28e-14!39;UBERON:0006240!2.28e-14!39;UBERON:0000153!3.21e-14!94;UBERON:0002791!4.17e-13!29;UBERON:0003528!4.17e-13!29;UBERON:0001893!4.17e-13!29;UBERON:0007811!1.49e-12!86;UBERON:0000956!2.51e-09!21;UBERON:0001869!2.51e-09!21;UBERON:0000203!2.51e-09!21;UBERON:0002619!1.76e-08!17;UBERON:0002021!7.79e-08!10;UBERON:0000411!7.79e-08!10;UBERON:0001950!7.79e-08!10;UBERON:0003076!1.43e-07!12;UBERON:0003057!1.43e-07!12;UBERON:0000468!2.35e-07!333;UBERON:0000479!2.66e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.40e-23,54;UBERON:0001049,7.84e-22,52;UBERON:0005068,7.84e-22,52;UBERON:0006241,7.84e-22,52;UBERON:0007135,7.84e-22,52;UBERON:0002346,1.80e-21,64;UBERON:0003075,1.80e-21,64;UBERON:0007284,1.80e-21,64;UBERON:0001017,4.96e-21,73;UBERON:0010371,5.90e-21,73;UBERON:0001016,9.85e-20,75;UBERON:0004121,2.25e-19,95;UBERON:0000924,2.25e-19,95;UBERON:0006601,2.25e-19,95;UBERON:0000955,1.11e-18,47;UBERON:0006238,1.11e-18,47;UBERON:0002616,4.22e-18,46;UBERON:0002020,4.05e-16,34;UBERON:0003056,8.96e-16,49;UBERON:0003080,4.70e-15,40;UBERON:0002780,1.94e-14,39;UBERON:0001890,1.94e-14,39;UBERON:0006240,1.94e-14,39;UBERON:0003528,3.61e-13,29;UBERON:0002791,3.61e-13,29;UBERON:0001893,3.61e-13,29;UBERON:0010314,4.21e-13,92;UBERON:0000956,2.28e-09,21;UBERON:0001869,2.28e-09,21;UBERON:0000203,2.28e-09,21;UBERON:0002619,1.61e-08,17;UBERON:0002021,7.20e-08,10;UBERON:0000411,7.20e-08,10;UBERON:0001950,7.20e-08,10;UBERON:0003076,1.32e-07,12;UBERON:0003057,1.32e-07,12
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|phase1_expression=16.9757777931082,0,0,0,0,0.839396359559449,0.233612640595526,13.5579489613655,1.267098499365,0.70219357896598,0.171217968225505,0,2.9104124088305,4.02133851127388,0,0.809901069559304,0,0.473193248037357,0.685572168028694,0.42438965179803,45.4131169406713,5.95745707205312,3.6567970479451,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,2.64383317748712,3.04130793658544,0.917733760808408,28.9484797408774,12.4274339136855,11.2039953194581,6.9994763666742,18.3382212329225,4.31257693094915,0.335565212115473,6.5282592781021,0.336093799142464,2.31533492432352,5.73066879877513,3.09403255366465,26.0988234508881,34.3844136526821,23.4517619297286,8.13226876965917,16.0073063300005,0,0.988866362566974,0,9.88680364710736,13.4476406862544,16.071889907814,17.1457541681247,15.1433972172995,139.397680389056,138.926312258565,19.5985278743926,16.7729574281914,22.9804696652505,81.4857519395476,87.2104519121832,95.6968702186397,28.0917792865313,29.916459457988,24.4829284161677,76.4961417263784,60.7783618834214,72.7319659417616,126.984920339151,115.321061447273,65.2398060388552,0.757261933331841,5.36558076758177,2.89864488701678,1.72084775396277,0,1.07940638327563,0,0,6.60088774619234,0,0,0,7.46470124816407,0,0,0,0,0,0,5.93756174539112,6.47344709117929,8.01587550950054,7.28638372417771,8.8294988710521,6.22661842591358,9.19408107370998,15.2865319276416,2.76466500925286,2.71914464507811,7.95296463059514,0.884610551949874,11.4854463462661,3.09178125844551,2.90925151881133,5.59175283654366,317.374383960517,279.401906889149,1.27728527604296,0.718890747035522,0.599902730993408,0.127070227073065,155.632474341611,189.405249566911,83.9371072113934,255.174102042262,233.468212542592,102.231717923304,121.031982248547,24.4414473240759,7.0911973247753,2.0217820674694,9.46988351489133,9.10843100738926,8.04657365517155,11.7040384373477,21.2493793148358,25.7858331783533,19.0889443224426,13.6804517857204,30.2682943764648,3.01795190105979,20.2343505779567,28.8559843628876,17.3164628617784,37.5363786454557,39.3524948170048,41.5679915544046,14.3304672109315,0,0.257347907114715,0,4.14251545071004,3.04883877975425,3.06105504483725,5.44512891845984,3.14822770795846,4.16521204795921,2.09280550275367,2.14618721119695,3.03589890154641,2.96207729844265,7.38753588355929,9.56611952641098,6.57899943413995,4.39100230582101,6.30770168173747,244.356920231516,40.9560357269552,0.991256348951394,1.32225283331772,11.3042772783674,15.3276203427889,15.5929628199733,11.0925938542838,7.56085349072559,8.75037880117772,4.74529061544512,4.94096864172033,7.03738584640755,9.94782360205754,9.35827618171777,0.898819408654221,3.24207074812041,1.99141273254367,6.82804443431094,6.740662243974,13.5249282807697,8.5533557695032,7.95205197387266,9.25792822552205,9.10606134589305,1.77132177575523,1.8839847340965,3.57851775373222,0.889357881261447,2.66952169145751,3.14494392181125,1.34917267430912,1.01430060694251,1.4470629585145,1.52775511068852,0.575392274901621,2.10775794807546,0.274561413188081,2.87536413054709,4.46569137202204,1.5601883655728,0.757736633841335,0.179397413521912,0.482443521363367,5.91210208533135,7.57965647081939,8.8001087278694,7.63852885988347,9.15291968325158,9.88286918906713,8.33152743101048,7.02481132288076,10.5615546551148,11.5161638617363,11.799652880654,10.9788420859544,7.59813920209941,7.08780387049407,0,0,3.44234991113325,5.24279817978992,102.270725822223,98.3406050508585,0,7.06918596172244,6.31016438832513,5.0757036758563,8.61693590931196,3.82350076724083,2.89638276307112,2.26461224631066,5.26253912177363,6.72188473196017,7.11518000303742,87.7207193831533,11.639086987078,23.6827252877449,26.0619134965722,33.9838453323423,6.63725691699814,4.61283208694465,5.74414758233027,11.3163047853539,8.26845300066164,10.7602301780375,8.78656196771952,10.9060118843252,9.9819265947722,8.21695570633122,4.21674434299995,3.09406629744561,7.83011093233712,11.8840322060665,16.4285528404098,8.78781843629528,19.6847659342924,18.7287258482174,24.1887060285118,13.0919928119278,2.81606049676452,2.54198485036584,3.96951116498931,13.0260139823769,23.5738062976022,15.5004217065361,14.5634259683826,9.35603128546849,5.24665505933731,121.824423420905,1.70870880797853,9.08102219038179,5.18544676635193,1.88368457004691,1.23024804948923,1.14389086603261,1.86976272993241,1.81936888020755,1.93479963326193,8.59203556213602,10.2809197913869,14.4356821660063,14.2567049884778,19.4452115293456,12.0099410060398,17.262636337257,18.1837602595739,4.18809507174447,8.42497326396654,2.4853572523477,1.69107881605257,11.6622905914303,7.61109056102649,18.0839605159964,10.3327858782185,21.7953401883104,27.3442366044607,17.7077963387772,16.8823544525394,4.83168241652012,4.32045009386798,10.1123558601017,4.25722952109345,8.11416561602135,5.84643703400078,8.41425469637163,8.94066096515692,8.41368146639782,7.82754494025259,11.4092088441407,10.135505285115,11.998316031284,12.2796929732088,11.7378446801202,15.0771203814224,4.0811469050738,0,0,0.167884616364078,11.0118068598349,11.0732660516197,15.3847364384503,3.64426244434412,2.50786052017682,194.274633860271,164.336109433062,182.180773273728,142.981847709948,224.707066484771,227.3735631143,204.531817570237,199.942614231554,181.710106002666,227.296776859049,3.52876981786201,13.5668456956351,16.3904261523969,23.5813515556245,15.9306003597267,19.4874118957015,28.4475811586067,27.4026626127729,28.2408904440797,26.5332072351987,30.1640366869385,31.1233463287026,25.0959240019285,27.5948406864987,27.4541541607831,27.1487404031352,24.5674771003094,26.0427447626002,25.1372399490017,25.3182142631163,22.9722399098228,26.9763225362193,24.0820551846794,23.8368123277019,25.0330951904779,25.9766846227447,24.8782043106971,21.3086466264653,27.2966268830182,27.4959713112292,26.9301491141875,26.1036878295243,18.8246279858057,23.2405261778949,26.4282057044164,35.4731020671883,28.7735878387852,25.7845264857958,32.1364397875657,19.8532277207564,12.2889952878823
|short_description=p1@Prrt2
|short_description=p1@Prrt2
}}
}}

Latest revision as of 22:05, 25 September 2015

Short description:p1@Prrt2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Prrt2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000161728_5end
EntrezGene:Prrt2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Prrt2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.02
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.04
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.43
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C326.10
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E813.45
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.15
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.14
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1139.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5138.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.60
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D381.49
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F387.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D795.70
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.09
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D824.48
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E476.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E560.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I672.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6126.98
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6115.32
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E165.24
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F95.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.46
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.94
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F59.19
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I32.76
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H17.95
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F511.49
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B2317.37
cerebellum, neonate N30.CNhs11135.1395-42I2279.40
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A4155.63
corpus striatum, adult.CNhs10487.19-21D8189.41
corpus striatum, neonate N00.CNhs11226.630-43F183.94
cortex, adult.CNhs10473.12-14D5255.17
cortex, neonate N30.CNhs11107.1392-42F2233.47
diencephalon, adult.CNhs10482.20-12F2102.23
diencephalon, neonate N30.CNhs11201.1388-42B2121.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C69.11
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D421.25
eyeball, neonate N00.CNhs11207.633-15C625.79
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A230.27
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H220.23
forelimb, embryo E13.CNhs10589.384-1E228.86
forelimb, embryo E14.CNhs10577.413-26A817.32
forelimb, embryo E15.CNhs11007.437-20E737.54
forelimb, embryo E17.CNhs10598.1517-43C439.35
forelimb, embryo E18.CNhs11008.1520-43B541.57
gonad, embryo E13.CNhs11044.1564-45I614.33
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G17.39
heart, neonate N16.CNhs11209.782-15G19.57
heart, neonate N20.CNhs11127.821-26I66.58
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D26.31
hippocampus, adult.CNhs10478.13-16E8244.36
hippocampus, neonate N00.CNhs11228.627-43G140.96
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I511.30
intestine, embryo E13.CNhs11010.381-16D515.33
intestine, embryo E15.CNhs10602.976-16D815.59
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I96.83
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G79.26
kidney, neonate N10.CNhs11206.758-6D59.11
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.91
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F88.80
lung, embryo E15.CNhs11020.432-17C57.64
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I68.33
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E510.56
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H27.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C2102.27
medulla oblongata, neonate N30.CNhs11200.1396-42A398.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I987.72
ovary, adult.CNhs10507.91-2I711.64
ovary, embryo E18.CNhs11040.505-44H723.68
ovary, neonate N00.CNhs11217.1299-22I426.06
oviduct, adult pregnant day01.CNhs10500.988-6G633.98
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E511.32
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B68.22
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E611.88
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B919.68
pituitary gland, embryo E16.CNhs11036.449-43F618.73
pituitary gland, embryo E17.CNhs11039.1265-44F524.19
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C313.03
skin, neonate N00.CNhs11124.650-25G423.57
skin, neonate N03.CNhs11215.662-22H315.50
skin, neonate N06.CNhs11097.693-20I514.56
skin, neonate N10.CNhs11108.762-6C49.36
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C9121.82
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E310.28
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B817.26
stomach, neonate N07.CNhs11210.718-18A918.18
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I18.42
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F511.66
testis, embryo E15.CNhs11034.443-27C57.61
testis, embryo E16.CNhs11033.470-26G518.08
testis, embryo E17.CNhs11029.486-18I510.33
testis, embryo E18.CNhs11027.503-18G521.80
testis, neonate N00.CNhs11189.1300-22B727.34
testis, neonate N07.CNhs11222.726-26I417.71
testis, neonate N10.CNhs11204.763-44D916.88
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F88.41
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C411.41
thymus, neonate N07.CNhs11211.713-19D310.14
thymus, neonate N10.CNhs11194.748-24E412.00
thymus, neonate N20.CNhs11186.820-7A212.28
thymus, neonate N25.CNhs11125.1362-25G711.74
thymus, neonate N30.CNhs11132.1393-42G215.08
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E411.01
uterus, adult pregnant day19.CNhs10497.590-15F511.07
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1194.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2164.34
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3182.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7142.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4224.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5227.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6204.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7199.94
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8181.71
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9227.30
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C913.57
whole body, embryo E13.CNhs10512.372-23H216.39
whole body, embryo E14.5.CNhs10578.420-27D223.58
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F219.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G528.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G527.40
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.12
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.10
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.57
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G526.04
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G525.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.98
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G525.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G521.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G527.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G523.24
whole body, embryo E17.5.CNhs10513.490-9F926.43
whole body, embryo E17.CNhs10517.475-3I535.47
whole body, embryo E18.CNhs10516.493-3B328.77
whole body, neonate N00.CNhs10525.657-19C225.78
whole body, neonate N01.CNhs10576.659-23C632.14
whole body, neonate N06.CNhs10515.692-21D119.85
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)6.55e-1023
neuroblast (sensu Vertebrata)6.55e-1023

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.40e-2354
neural tube7.84e-2252
neural rod7.84e-2252
future spinal cord7.84e-2252
neural keel7.84e-2252
neurectoderm1.80e-2164
neural plate1.80e-2164
presumptive neural plate1.80e-2164
central nervous system4.96e-2173
ecto-epithelium5.90e-2173
nervous system9.85e-2075
ectoderm-derived structure2.25e-1995
ectoderm2.25e-1995
presumptive ectoderm2.25e-1995
brain1.11e-1847
future brain1.11e-1847
regional part of brain4.22e-1846
gray matter4.05e-1634
pre-chordal neural plate8.96e-1649
anterior neural tube4.70e-1540
regional part of forebrain1.94e-1439
forebrain1.94e-1439
future forebrain1.94e-1439
brain grey matter3.61e-1329
regional part of telencephalon3.61e-1329
telencephalon3.61e-1329
structure with developmental contribution from neural crest4.21e-1392
cerebral cortex2.28e-0921
cerebral hemisphere2.28e-0921
pallium2.28e-0921
regional part of cerebral cortex1.61e-0817
occipital lobe7.20e-0810
visual cortex7.20e-0810
neocortex7.20e-0810
posterior neural tube1.32e-0712
chordal neural plate1.32e-0712
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