FFCP PHASE1:Mm9::chr19:55968937..55968951,+: Difference between revisions
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{{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=D3Z002|association_with_transcript=-72bp_to_ENSMUST00000142291_5end|description=CAGE_peak_21_at_Tcf7l2_5end|id=chr19:55968937..55968951,+|ontology_enrichment_celltype=CL:0002613!2.15e-08!3;CL:0000120!3.65e-08!3;CL:0002610!6.83e-08!3;CL:0000117!4.13e-07!23;CL:0000337!4.13e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-23,23;CL:0000337,1.93e-23,23;CL:0002613,4.98e-22,3;CL:0000120,2.44e-21,3;CL:0002610,1.58e-20,3;CL:0000540,4.18e-16,33;CL:0000047,4.18e-16,33;CL:0000031,4.18e-16,33;CL:0000404,4.18e-16,33;CL:0000393,1.68e-13,39;CL:0000211,1.68e-13,39;CL:0002319,3.64e-12,43;CL:0000221,7.21e-12,44;CL:0000133,7.21e-12,44;CL:0002321,4.08e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!1.18e-11!5;UBERON:0002435!1.18e-11!5;UBERON:0000204!1.18e-11!5;UBERON:0010082!1.18e-11!5;UBERON:0004684!6.83e-08!3;UBERON:0002275!6.83e-08!3;UBERON:0002420!4.19e-07!8;UBERON:0007245!4.19e-07!8;UBERON:0010009!4.19e-07!8;UBERON:0010011!4.19e-07!8;UBERON:0000454!4.19e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.58e-20,3;UBERON:0002275,1.58e-20,3;UBERON:0000369,1.79e-13,5;UBERON:0002435,1.79e-13,5;UBERON:0000204,1.79e-13,5;UBERON:0010082,1.79e-13,5;UBERON:0001017,2.29e-12,73;UBERON:0001016,5.27e-12,75;UBERON:0000073,2.26e-09,54;UBERON:0004121,3.22e-09,95;UBERON:0000924,3.22e-09,95;UBERON:0006601,3.22e-09,95;UBERON:0002420,1.26e-08,8;UBERON:0007245,1.26e-08,8;UBERON:0010009,1.26e-08,8;UBERON:0010011,1.26e-08,8;UBERON:0000454,1.26e-08,8;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,6.34789175126439,6.97214543856797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,2.93680877595932,2.61131106535614,12.0016521834476,12.9912453915422,7.8137005583514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,5.24267237916879,0.457500602818626,0.125654352112864,0,0,2.70124457927428,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,1.49886346762768,0,0,0,0,0|short_description=p21@Tcf7l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z002 | |||
|association_with_transcript=-72bp_to_ENSMUST00000142291_5end | |||
|cluster_id=chr19:55968937..55968951,+ | |||
|description=CAGE_peak_21_at_Tcf7l2_5end | |||
|id=chr19:55968937..55968951,+ | |||
|ontology_enrichment_celltype=CL:0002613!2.15e-08!3;CL:0000120!3.65e-08!3;CL:0002610!6.83e-08!3;CL:0000117!4.13e-07!23;CL:0000337!4.13e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-23,23;CL:0000337,1.93e-23,23;CL:0002613,4.98e-22,3;CL:0000120,2.44e-21,3;CL:0002610,1.58e-20,3;CL:0000540,4.18e-16,33;CL:0000047,4.18e-16,33;CL:0000031,4.18e-16,33;CL:0000404,4.18e-16,33;CL:0000393,1.68e-13,39;CL:0000211,1.68e-13,39;CL:0002319,3.64e-12,43;CL:0000221,7.21e-12,44;CL:0000133,7.21e-12,44;CL:0002321,4.08e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!1.18e-11!5;UBERON:0002435!1.18e-11!5;UBERON:0000204!1.18e-11!5;UBERON:0010082!1.18e-11!5;UBERON:0004684!6.83e-08!3;UBERON:0002275!6.83e-08!3;UBERON:0002420!4.19e-07!8;UBERON:0007245!4.19e-07!8;UBERON:0010009!4.19e-07!8;UBERON:0010011!4.19e-07!8;UBERON:0000454!4.19e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.58e-20,3;UBERON:0002275,1.58e-20,3;UBERON:0000369,1.79e-13,5;UBERON:0002435,1.79e-13,5;UBERON:0000204,1.79e-13,5;UBERON:0010082,1.79e-13,5;UBERON:0001017,2.29e-12,73;UBERON:0001016,5.27e-12,75;UBERON:0000073,2.26e-09,54;UBERON:0004121,3.22e-09,95;UBERON:0000924,3.22e-09,95;UBERON:0006601,3.22e-09,95;UBERON:0002420,1.26e-08,8;UBERON:0007245,1.26e-08,8;UBERON:0010009,1.26e-08,8;UBERON:0010011,1.26e-08,8;UBERON:0000454,1.26e-08,8;UBERON:0002259,3.50e-08,1;UBERON:0002314,3.50e-08,1;UBERON:0004061,3.50e-08,1;UBERON:0006777,3.50e-08,1;UBERON:0005882,3.50e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,6.34789175126439,6.97214543856797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30347642998166,2.93680877595932,2.61131106535614,12.0016521834476,12.9912453915422,7.8137005583514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,5.24267237916879,0.457500602818626,0.125654352112864,0,0,2.70124457927428,1.62241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0.476293691283074,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.365855945745545,0,0.407412341537585,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,1.49886346762768,0,0,0,0,0 | |||
|short_description=p21@Tcf7l2 | |||
}} |
Latest revision as of 23:55, 25 September 2015
Short description: | p21@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -72bp_to_ENSMUST00000142291_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-23 | 23 |
striatum neuron | 4.98e-22 | 3 |
granule cell | 2.44e-21 | 3 |
raphe nuclei neuron | 1.58e-20 | 3 |
neuron | 4.18e-16 | 33 |
neuronal stem cell | 4.18e-16 | 33 |
neuroblast | 4.18e-16 | 33 |
electrically signaling cell | 4.18e-16 | 33 |
electrically responsive cell | 1.68e-13 | 39 |
electrically active cell | 1.68e-13 | 39 |
neural cell | 3.64e-12 | 43 |
ectodermal cell | 7.21e-12 | 44 |
neurectodermal cell | 7.21e-12 | 44 |
embryonic cell | 4.08e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.58e-20 | 3 |
reticular formation | 1.58e-20 | 3 |
corpus striatum | 1.79e-13 | 5 |
striatum | 1.79e-13 | 5 |
ventral part of telencephalon | 1.79e-13 | 5 |
future corpus striatum | 1.79e-13 | 5 |
central nervous system | 2.29e-12 | 73 |
nervous system | 5.27e-12 | 75 |
regional part of nervous system | 2.26e-09 | 54 |
ectoderm-derived structure | 3.22e-09 | 95 |
ectoderm | 3.22e-09 | 95 |
presumptive ectoderm | 3.22e-09 | 95 |
basal ganglion | 1.26e-08 | 8 |
nuclear complex of neuraxis | 1.26e-08 | 8 |
aggregate regional part of brain | 1.26e-08 | 8 |
collection of basal ganglia | 1.26e-08 | 8 |
cerebral subcortex | 1.26e-08 | 8 |
corpora quadrigemina | 3.50e-08 | 1 |
midbrain tectum | 3.50e-08 | 1 |
neural tube mantle layer | 3.50e-08 | 1 |
tectal plate | 3.50e-08 | 1 |
neural tube alar plate | 3.50e-08 | 1 |