FFCP PHASE1:Mm9::chr19:55969998..55970001,+: Difference between revisions
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|id=chr19:55969998..55970001,+
|short_description=p40@Tcf7l2
|description=CAGE_peak_40_at_Tcf7l2_5end
|association_with_transcript=0bp_to_ENSMUST00000111646_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C834 | |UniProt=Q8C834 | ||
|association_with_transcript=0bp_to_ENSMUST00000111646_5end | |||
|cluster_id=chr19:55969998..55970001,+ | |||
|description=CAGE_peak_40_at_Tcf7l2_5end | |||
|id=chr19:55969998..55970001,+ | |||
|ontology_enrichment_celltype=CL:0000117!9.48e-13!23;CL:0000337!9.48e-13!23;CL:0000540!1.75e-09!33;CL:0000047!1.75e-09!33;CL:0000031!1.75e-09!33;CL:0000404!1.75e-09!33;CL:0002319!5.90e-09!43;CL:0000393!7.70e-09!39;CL:0000211!7.70e-09!39;CL:0000221!1.14e-08!44;CL:0000133!1.14e-08!44;CL:0002613!2.15e-08!3;CL:0000055!2.53e-08!50;CL:0002610!4.06e-08!3;CL:0000120!6.49e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0002610,7.68e-33,3;CL:0000117,2.34e-23,23;CL:0000337,2.34e-23,23;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!3.24e-10!8;UBERON:0007245!3.24e-10!8;UBERON:0010009!3.24e-10!8;UBERON:0010011!3.24e-10!8;UBERON:0000454!3.24e-10!8;UBERON:0001017!7.79e-10!73;UBERON:0005743!7.79e-10!73;UBERON:0000073!1.98e-09!75;UBERON:0001016!1.98e-09!75;UBERON:0002616!2.37e-09!49;UBERON:0000955!4.40e-09!50;UBERON:0006238!4.40e-09!50;UBERON:0004684!4.06e-08!3;UBERON:0002275!4.06e-08!3;UBERON:0000369!4.31e-08!5;UBERON:0002435!4.31e-08!5;UBERON:0000204!4.31e-08!5;UBERON:0010082!4.31e-08!5;UBERON:0000033!2.92e-07!63;UBERON:0004121!4.80e-07!102;UBERON:0000924!4.80e-07!102;UBERON:0006601!4.80e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.68e-33,3;UBERON:0002275,7.68e-33,3;UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0000073,6.13e-10,54;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,3.30347642998166,1.14918604276669,1.38245879930619,7.25374582516066,7.31901148819277,5.2091337055676,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.251308704225729,0,0,1.24672826735736,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0.749431733813838,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,3.30347642998166,1.14918604276669,1.38245879930619,7.25374582516066,7.31901148819277,5.2091337055676,0.279182999001381,0,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0.251308704225729,0,0,1.24672826735736,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0,0.412070114477788,0,0.505394423527595,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0,0.749431733813838,0,0,0,0,0.231867835620421 | ||
|short_description=p40@Tcf7l2 | |||
}} | }} |
Latest revision as of 23:58, 25 September 2015
Short description: | p40@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | 0bp_to_ENSMUST00000111646_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.67e-34 | 3 |
raphe nuclei neuron | 7.68e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.34e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-23 | 23 |
neuron | 2.59e-16 | 33 |
neuronal stem cell | 2.59e-16 | 33 |
neuroblast | 2.59e-16 | 33 |
electrically signaling cell | 2.59e-16 | 33 |
electrically responsive cell | 8.25e-14 | 39 |
electrically active cell | 8.25e-14 | 39 |
neural cell | 1.59e-12 | 43 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 7.68e-33 | 3 |
reticular formation | 7.68e-33 | 3 |
corpus striatum | 7.72e-21 | 5 |
striatum | 7.72e-21 | 5 |
ventral part of telencephalon | 7.72e-21 | 5 |
future corpus striatum | 7.72e-21 | 5 |
basal ganglion | 2.64e-13 | 8 |
nuclear complex of neuraxis | 2.64e-13 | 8 |
aggregate regional part of brain | 2.64e-13 | 8 |
collection of basal ganglia | 2.64e-13 | 8 |
cerebral subcortex | 2.64e-13 | 8 |
regional part of nervous system | 6.13e-10 | 54 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |