FFCP PHASE1:Mm9::chr19:55970047..55970056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21416 | |EntrezGene=21416 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3209 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C834 | |UniProt=Q8C834 | ||
|association_with_transcript=47bp_to_ENSMUST00000111646_5end | |association_with_transcript=47bp_to_ENSMUST00000111646_5end | ||
|cluster_id=chr19:55970047..55970056,+ | |||
|description=CAGE_peak_56_at_Tcf7l2_5end | |description=CAGE_peak_56_at_Tcf7l2_5end | ||
|id=chr19:55970047..55970056,+ | |id=chr19:55970047..55970056,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.25e-11!23;CL:0000337!3.25e-11!23;CL:0002613!4.75e-10!3;CL:0002610!5.43e-10!3;CL:0000540!9.48e-09!33;CL:0000047!9.48e-09!33;CL:0000031!9.48e-09!33;CL:0000404!9.48e-09!33;CL:0000393!4.62e-07!39;CL:0000211!4.62e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.31e-33,3;CL:0000117,2.34e-23,23;CL:0000337,2.34e-23,23;CL:0000540,2.59e-16,33;CL:0000047,2.59e-16,33;CL:0000031,2.59e-16,33;CL:0000404,2.59e-16,33;CL:0002610,6.26e-16,3;CL:0000120,3.36e-15,3;CL:0000393,8.25e-14,39;CL:0000211,8.25e-14,39;CL:0002319,1.59e-12,43;CL:0000221,3.05e-12,44;CL:0000133,3.05e-12,44;CL:0002321,1.15e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!5.43e-10!3;UBERON:0002275!5.43e-10!3;UBERON:0000955!2.64e-07!50;UBERON:0006238!2.64e-07!50;UBERON:0001017!6.82e-07!73;UBERON:0005743!6.82e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.65e-20,5;UBERON:0002435,1.65e-20,5;UBERON:0000204,1.65e-20,5;UBERON:0010082,1.65e-20,5;UBERON:0004684,6.26e-16,3;UBERON:0002275,6.26e-16,3;UBERON:0002420,4.23e-13,8;UBERON:0007245,4.23e-13,8;UBERON:0010009,4.23e-13,8;UBERON:0010011,4.23e-13,8;UBERON:0000454,4.23e-13,8;UBERON:0002259,5.53e-12,1;UBERON:0002314,5.53e-12,1;UBERON:0004061,5.53e-12,1;UBERON:0006777,5.53e-12,1;UBERON:0005882,5.53e-12,1;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0000073,2.00e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,2.20231761998777,0.893811366596314,2.15049146558741,1.31886287730194,2.19570344645783,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,2.20231761998777,0.893811366596314,2.15049146558741,1.31886287730194,2.19570344645783,1.56274011167028,0,0,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19832511523858,0,0,0,0,0.83115217823824,0.324482526135515,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0.145346416632329,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | ||
|short_description=p56@Tcf7l2 | |short_description=p56@Tcf7l2 | ||
}} | }} |
Latest revision as of 23:58, 25 September 2015
Short description: | p56@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_56_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3209 |
Association with transcript: | 47bp_to_ENSMUST00000111646_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.31e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.34e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.34e-23 | 23 |
neuron | 2.59e-16 | 33 |
neuronal stem cell | 2.59e-16 | 33 |
neuroblast | 2.59e-16 | 33 |
electrically signaling cell | 2.59e-16 | 33 |
raphe nuclei neuron | 6.26e-16 | 3 |
granule cell | 3.36e-15 | 3 |
electrically responsive cell | 8.25e-14 | 39 |
electrically active cell | 8.25e-14 | 39 |
neural cell | 1.59e-12 | 43 |
ectodermal cell | 3.05e-12 | 44 |
neurectodermal cell | 3.05e-12 | 44 |
embryonic cell | 1.15e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.65e-20 | 5 |
striatum | 1.65e-20 | 5 |
ventral part of telencephalon | 1.65e-20 | 5 |
future corpus striatum | 1.65e-20 | 5 |
raphe nuclei | 6.26e-16 | 3 |
reticular formation | 6.26e-16 | 3 |
basal ganglion | 4.23e-13 | 8 |
nuclear complex of neuraxis | 4.23e-13 | 8 |
aggregate regional part of brain | 4.23e-13 | 8 |
collection of basal ganglia | 4.23e-13 | 8 |
cerebral subcortex | 4.23e-13 | 8 |
corpora quadrigemina | 5.53e-12 | 1 |
midbrain tectum | 5.53e-12 | 1 |
neural tube mantle layer | 5.53e-12 | 1 |
tectal plate | 5.53e-12 | 1 |
neural tube alar plate | 5.53e-12 | 1 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
regional part of nervous system | 2.00e-07 | 54 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |